Protein–RNA interactions for Protein: P06323

T-cell receptor alpha chain V region CTL-F3, mousemouse

Predictions only

Length 132 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
P06323 Tbcel-201ENSMUST00000066148 5000 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
P06323 Vps26a-201ENSMUST00000092473 2712 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
P06323 Ppp2r1b-209ENSMUST00000176349 1890 ntAPPRIS ALT2 TSL 5 BASIC15.25■□□□□ 0.03
P06323 Slc9a5-201ENSMUST00000073149 3499 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
P06323 Donson-202ENSMUST00000114031 2147 ntAPPRIS ALT2 TSL 5 BASIC15.25■□□□□ 0.03
P06323 Tbkbp1-203ENSMUST00000107614 2391 ntAPPRIS ALT2 TSL 5 BASIC15.25■□□□□ 0.03
P06323 Cacnb3-201ENSMUST00000003442 2819 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
P06323 Jagn1-201ENSMUST00000101070 1201 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
P06323 Smox-206ENSMUST00000110183 1159 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
P06323 Usf2-211ENSMUST00000172417 648 ntTSL 5 BASIC15.25■□□□□ 0.03
P06323 Fam129b-201ENSMUST00000028135 3714 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
P06323 Ttc19-201ENSMUST00000050646 3410 ntAPPRIS P3 TSL 1 (best) BASIC15.25■□□□□ 0.03
P06323 Larp6-201ENSMUST00000038407 2440 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
P06323 Map3k1-201ENSMUST00000109267 6978 ntAPPRIS P1 TSL 2 BASIC15.25■□□□□ 0.03
P06323 Gm10571-201ENSMUST00000097869 1638 ntBASIC15.25■□□□□ 0.03
P06323 Pianp-201ENSMUST00000032479 2250 ntAPPRIS P2 TSL 1 (best) BASIC15.24■□□□□ 0.03
P06323 Gm10300-201ENSMUST00000094662 2296 ntAPPRIS P1 BASIC15.24■□□□□ 0.03
P06323 Sqstm1-202ENSMUST00000102774 2037 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
P06323 Ppp1r13b-201ENSMUST00000054815 4389 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
P06323 Icmt-201ENSMUST00000048892 4919 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
P06323 Mrpl16-201ENSMUST00000167199 1122 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
P06323 Gm7160-202ENSMUST00000188519 1027 ntBASIC15.24■□□□□ 0.03
P06323 Rfxap-204ENSMUST00000217267 696 ntAPPRIS P2 TSL 1 (best) BASIC15.24■□□□□ 0.03
P06323 Spata33-201ENSMUST00000060133 491 ntAPPRIS P2 TSL 1 (best) BASIC15.24■□□□□ 0.03
P06323 Enah-205ENSMUST00000177811 4231 ntAPPRIS ALT2 TSL 5 BASIC15.24■□□□□ 0.03
P06323 Snap91-201ENSMUST00000036347 4237 ntAPPRIS ALT2 TSL 5 BASIC15.24■□□□□ 0.03
P06323 Snx16-202ENSMUST00000099223 2512 ntAPPRIS ALT2 TSL 1 (best) BASIC15.24■□□□□ 0.03
P06323 Atxn7-203ENSMUST00000223880 2946 ntAPPRIS P2 BASIC15.24■□□□□ 0.03
P06323 Ildr2-204ENSMUST00000192732 2263 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
P06323 Fbxl5-201ENSMUST00000047857 2858 ntAPPRIS P2 TSL 1 (best) BASIC15.24■□□□□ 0.03
P06323 Csnk2a2-203ENSMUST00000212214 6779 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
P06323 Rce1-201ENSMUST00000025823 1402 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
P06323 AC126028.2-201ENSMUST00000228100 1833 ntBASIC15.24■□□□□ 0.03
P06323 Ciapin1-201ENSMUST00000034233 1807 ntAPPRIS P1 TSL 5 BASIC15.24■□□□□ 0.03
P06323 Papola-212ENSMUST00000168186 2436 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
P06323 Vgf-204ENSMUST00000190827 2834 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
P06323 Ism1-202ENSMUST00000184404 2964 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
P06323 Grb14-201ENSMUST00000028252 1986 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
P06323 Arih1-207ENSMUST00000171975 6971 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
P06323 Ero1l-201ENSMUST00000022378 4418 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
P06323 Clcc1-203ENSMUST00000106613 3064 ntAPPRIS ALT2 TSL 1 (best) BASIC15.23■□□□□ 0.03
P06323 Ciz1-205ENSMUST00000113338 2666 ntAPPRIS P3 TSL 5 BASIC15.23■□□□□ 0.03
P06323 Shc2-201ENSMUST00000020564 3243 ntAPPRIS P1 TSL 5 BASIC15.23■□□□□ 0.03
P06323 Sra1-201ENSMUST00000001415 2061 ntAPPRIS P4 TSL 5 BASIC15.23■□□□□ 0.03
P06323 Minpp1-201ENSMUST00000025827 2619 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
P06323 Prr3-204ENSMUST00000172900 439 ntTSL 2 BASIC15.23■□□□□ 0.03
P06323 Fam168b-208ENSMUST00000191307 844 ntTSL 2 BASIC15.23■□□□□ 0.03
P06323 Arhgap35-201ENSMUST00000075845 9147 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
P06323 Crlf2-203ENSMUST00000200284 1405 ntAPPRIS ALT2 TSL 1 (best) BASIC15.23■□□□□ 0.03
P06323 AU019823-202ENSMUST00000145139 2805 ntTSL 2 BASIC15.23■□□□□ 0.03
P06323 Mfsd14a-201ENSMUST00000029570 2782 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
P06323 Tuba1b-201ENSMUST00000077577 1743 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
P06323 Spint2-201ENSMUST00000098604 1384 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
P06323 Rragd-201ENSMUST00000029946 5055 ntTSL 5 BASIC15.22■□□□□ 0.03
P06323 Slc39a5-202ENSMUST00000167859 2025 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
P06323 Hopxos-201ENSMUST00000148568 1661 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
P06323 Sebox-202ENSMUST00000125670 1300 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
P06323 Scrib-203ENSMUST00000109946 5545 ntAPPRIS ALT2 TSL 1 (best) BASIC15.22■□□□□ 0.03
P06323 Pgf-204ENSMUST00000223220 2080 ntAPPRIS ALT2 TSL 1 (best) BASIC15.22■□□□□ 0.03
P06323 Usf2-203ENSMUST00000162228 960 ntTSL 5 BASIC15.22■□□□□ 0.03
P06323 Gm43137-201ENSMUST00000198052 594 ntBASIC15.22■□□□□ 0.03
P06323 Wdr41-208ENSMUST00000222995 1112 ntTSL 5 BASIC15.22■□□□□ 0.03
P06323 Kdelr3-201ENSMUST00000010974 1414 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
P06323 Lypla2-202ENSMUST00000105852 1588 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
P06323 1700086O06Rik-202ENSMUST00000181871 1564 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
P06323 Kcne1l-201ENSMUST00000134825 1543 ntAPPRIS P1 BASIC15.22■□□□□ 0.03
P06323 Marcks-201ENSMUST00000092584 4048 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
P06323 Kmt5b-204ENSMUST00000113970 2975 ntAPPRIS ALT2 TSL 1 (best) BASIC15.21■□□□□ 0.03
P06323 Csf1-203ENSMUST00000120243 2097 ntAPPRIS P3 TSL 1 (best) BASIC15.21■□□□□ 0.03
P06323 Gm3667-201ENSMUST00000171906 2053 ntAPPRIS P1 TSL 5 BASIC15.21■□□□□ 0.03
P06323 Zfp771-201ENSMUST00000052509 1484 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
P06323 Atp8b2-201ENSMUST00000069805 5559 ntAPPRIS ALT2 TSL 5 BASIC15.21■□□□□ 0.03
P06323 Mon2-202ENSMUST00000073792 9301 ntAPPRIS ALT2 TSL 5 BASIC15.21■□□□□ 0.03
P06323 Map6-206ENSMUST00000208605 2275 ntAPPRIS ALT2 TSL 1 (best) BASIC15.21■□□□□ 0.03
P06323 Arhgap44-202ENSMUST00000093001 2256 ntTSL 2 BASIC15.21■□□□□ 0.03
P06323 Hyi-205ENSMUST00000194248 936 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
P06323 Hebp2-202ENSMUST00000213153 968 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
P06323 AC124603.1-201ENSMUST00000223843 308 ntBASIC15.21■□□□□ 0.03
P06323 Spcs1-204ENSMUST00000226782 949 ntBASIC15.21■□□□□ 0.03
P06323 AC158777.2-201ENSMUST00000228787 398 ntAPPRIS P1 BASIC15.21■□□□□ 0.03
P06323 Igfbpl1-201ENSMUST00000044297 2864 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.02
P06323 Gm21964-202ENSMUST00000213641 1649 ntAPPRIS ALT2 TSL 5 BASIC15.21■□□□□ 0.02
P06323 Cables2-201ENSMUST00000108891 2975 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.02
P06323 Zhx1-202ENSMUST00000110168 5212 ntAPPRIS P1 TSL 5 BASIC15.2■□□□□ 0.02
P06323 Kcnq2-203ENSMUST00000081528 2382 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
P06323 Kcns1-201ENSMUST00000045196 2712 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
P06323 Hnrnpab-203ENSMUST00000109103 1437 ntAPPRIS ALT2 TSL 1 (best) BASIC15.2■□□□□ 0.02
P06323 Pllp-201ENSMUST00000034227 1926 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
P06323 Camk2d-228ENSMUST00000200171 5396 ntTSL 5 BASIC15.2■□□□□ 0.02
P06323 1700023F06Rik-202ENSMUST00000107026 1127 ntAPPRIS ALT2 TSL 1 (best) BASIC15.2■□□□□ 0.02
P06323 Pde6d-203ENSMUST00000146220 879 ntTSL 2 BASIC15.2■□□□□ 0.02
P06323 AC140930.3-201ENSMUST00000222935 274 ntBASIC15.2■□□□□ 0.02
P06323 Trim72-202ENSMUST00000106248 2134 ntAPPRIS P1 TSL 5 BASIC15.2■□□□□ 0.02
P06323 Slc17a7-202ENSMUST00000209634 1860 ntTSL 5 BASIC15.2■□□□□ 0.02
P06323 1810055G02Rik-201ENSMUST00000039048 1882 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
P06323 Sbspon-201ENSMUST00000040695 2748 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
P06323 Ptpre-201ENSMUST00000073961 5410 ntAPPRIS P3 TSL 1 (best) BASIC15.2■□□□□ 0.02
P06323 Wnt8a-201ENSMUST00000012426 1746 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
P06323 Rhbdd3-202ENSMUST00000101610 2333 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
P06323 Lrch2-201ENSMUST00000112819 4892 ntAPPRIS P1 TSL 5 BASIC15.2■□□□□ 0.02
Retrieved 100 of 76,532 protein–RNA pairs in 21.5 ms