Protein–RNA interactions for Protein: P04925

Prnp, Major prion protein, mousemouse

Predictions only

Length 254 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PrnpP04925 Gm29241-201ENSMUST00000189260 1096 ntBASIC19.68■□□□□ 0.74
PrnpP04925 Prdx5-201ENSMUST00000025904 1262 ntAPPRIS P2 TSL 1 (best) BASIC19.68■□□□□ 0.74
PrnpP04925 Gart-202ENSMUST00000120450 1865 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
PrnpP04925 Gm21596-201ENSMUST00000178049 1316 ntBASIC19.68■□□□□ 0.74
PrnpP04925 Mcmbp-202ENSMUST00000119081 2347 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
PrnpP04925 Tsc22d1-214ENSMUST00000177207 1476 ntTSL 3 BASIC19.67■□□□□ 0.74
PrnpP04925 Nkd1-203ENSMUST00000211113 1474 ntTSL 5 BASIC19.67■□□□□ 0.74
PrnpP04925 Nrxn1-213ENSMUST00000172466 2477 ntTSL 5 BASIC19.67■□□□□ 0.74
PrnpP04925 Sphk1-203ENSMUST00000100201 1800 ntAPPRIS ALT2 TSL 1 (best) BASIC19.67■□□□□ 0.74
PrnpP04925 Rbfox3-206ENSMUST00000120061 2150 ntAPPRIS ALT2 TSL 5 BASIC19.67■□□□□ 0.74
PrnpP04925 Mpp6-201ENSMUST00000036225 1896 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
PrnpP04925 Cbx4-201ENSMUST00000026665 5179 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
PrnpP04925 Josd2-205ENSMUST00000120852 727 ntAPPRIS P1 TSL 3 BASIC19.67■□□□□ 0.74
PrnpP04925 Gm2479-201ENSMUST00000173312 1053 ntTSL 3 BASIC19.67■□□□□ 0.74
PrnpP04925 Gm18666-201ENSMUST00000190039 958 ntBASIC19.67■□□□□ 0.74
PrnpP04925 Gm44899-201ENSMUST00000207451 391 ntTSL 3 BASIC19.67■□□□□ 0.74
PrnpP04925 Olfr718-ps1-204ENSMUST00000218872 963 ntAPPRIS ALT2 BASIC19.67■□□□□ 0.74
PrnpP04925 St3gal4-201ENSMUST00000034537 2095 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
PrnpP04925 Gnas-208ENSMUST00000109087 1716 ntAPPRIS P4 TSL 1 (best) BASIC19.67■□□□□ 0.74
PrnpP04925 Ntmt1-201ENSMUST00000041830 1387 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
PrnpP04925 Rhoq-201ENSMUST00000024956 4151 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
PrnpP04925 9130221H12Rik-201ENSMUST00000169914 1465 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
PrnpP04925 Smpdl3a-201ENSMUST00000020022 1961 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
PrnpP04925 Alg9-201ENSMUST00000034561 2873 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
PrnpP04925 Hfe2-201ENSMUST00000049208 2028 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
PrnpP04925 Ung-202ENSMUST00000102584 2136 ntAPPRIS P3 TSL 1 (best) BASIC19.66■□□□□ 0.74
PrnpP04925 Cpne2-202ENSMUST00000109537 2121 ntAPPRIS ALT2 TSL 1 (best) BASIC19.66■□□□□ 0.74
PrnpP04925 Sdr39u1-201ENSMUST00000111325 1255 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
PrnpP04925 Atp8a1-204ENSMUST00000113652 854 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
PrnpP04925 Snca-201ENSMUST00000114268 1280 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
PrnpP04925 Ccnd2-202ENSMUST00000201066 983 ntTSL 2 BASIC19.66■□□□□ 0.74
PrnpP04925 Aprt-204ENSMUST00000212093 723 ntTSL 2 BASIC19.66■□□□□ 0.74
PrnpP04925 Cst3-201ENSMUST00000028938 860 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
PrnpP04925 Tmem91-201ENSMUST00000079439 877 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
PrnpP04925 Nol7-201ENSMUST00000071926 1800 ntAPPRIS P2 TSL 1 (best) BASIC19.66■□□□□ 0.74
PrnpP04925 Mgat5b-201ENSMUST00000103027 4258 ntAPPRIS P1 TSL 5 BASIC19.66■□□□□ 0.74
PrnpP04925 Osbpl2-201ENSMUST00000040668 2805 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
PrnpP04925 Klhl32-201ENSMUST00000084781 2287 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
PrnpP04925 Tmem250-ps-201ENSMUST00000133808 2483 ntTSL 2 BASIC19.65■□□□□ 0.74
PrnpP04925 Mboat4-201ENSMUST00000095345 1836 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
PrnpP04925 Gm11249-201ENSMUST00000117071 859 ntBASIC19.65■□□□□ 0.74
PrnpP04925 Gm11527-201ENSMUST00000153795 596 ntTSL 2 BASIC19.65■□□□□ 0.74
PrnpP04925 Marc1-202ENSMUST00000110992 2152 ntAPPRIS ALT2 TSL 5 BASIC19.65■□□□□ 0.74
PrnpP04925 Hmga1-202ENSMUST00000117254 1328 ntAPPRIS P3 TSL 2 BASIC19.65■□□□□ 0.74
PrnpP04925 Agps-202ENSMUST00000111952 2589 ntTSL 2 BASIC19.65■□□□□ 0.74
PrnpP04925 Gm43672-201ENSMUST00000199072 1731 ntBASIC19.65■□□□□ 0.74
PrnpP04925 Krt24-201ENSMUST00000017255 1847 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
PrnpP04925 Usp39-201ENSMUST00000070345 2244 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.74
PrnpP04925 Krt1-201ENSMUST00000023790 2445 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.74
PrnpP04925 Cyp4f13-201ENSMUST00000075253 1752 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
PrnpP04925 E030030I06Rik-202ENSMUST00000179054 2081 ntAPPRIS P4 TSL 1 (best) BASIC19.64■□□□□ 0.73
PrnpP04925 Hcn4-201ENSMUST00000034889 6118 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
PrnpP04925 Gfi1-202ENSMUST00000065478 2639 ntAPPRIS ALT2 TSL 1 (best) BASIC19.63■□□□□ 0.73
PrnpP04925 Nhlh1-201ENSMUST00000059794 2464 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
PrnpP04925 Slc9a3r2-201ENSMUST00000002572 2118 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
PrnpP04925 Arid3c-202ENSMUST00000150809 1327 ntAPPRIS ALT2 TSL 1 (best) BASIC19.63■□□□□ 0.73
PrnpP04925 Rpl36al-202ENSMUST00000110619 1276 ntAPPRIS P1 BASIC19.63■□□□□ 0.73
PrnpP04925 Mthfsl-201ENSMUST00000113110 801 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
PrnpP04925 Speg-203ENSMUST00000113588 1078 ntTSL 5 BASIC19.63■□□□□ 0.73
PrnpP04925 Mthfs-203ENSMUST00000118870 705 ntTSL 3 BASIC19.63■□□□□ 0.73
PrnpP04925 Gm10830-201ENSMUST00000186379 636 ntTSL 5 BASIC19.63■□□□□ 0.73
PrnpP04925 AC160393.1-201ENSMUST00000218378 1279 ntBASIC19.63■□□□□ 0.73
PrnpP04925 Mthfs-201ENSMUST00000085256 816 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
PrnpP04925 Sec22c-202ENSMUST00000111560 2669 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
PrnpP04925 Zfp69-201ENSMUST00000106280 2362 ntAPPRIS P1 TSL 5 BASIC19.63■□□□□ 0.73
PrnpP04925 H19-202ENSMUST00000136359 2286 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
PrnpP04925 Hras-207ENSMUST00000168550 2272 ntTSL 5 BASIC19.63■□□□□ 0.73
PrnpP04925 Ewsr1-205ENSMUST00000102930 2174 ntAPPRIS ALT2 TSL 5 BASIC19.63■□□□□ 0.73
PrnpP04925 Syt5-201ENSMUST00000065957 1750 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
PrnpP04925 Gm16432-201ENSMUST00000094273 1663 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
PrnpP04925 Raph1-202ENSMUST00000090293 2409 ntAPPRIS ALT2 TSL 5 BASIC19.62■□□□□ 0.73
PrnpP04925 Acot7-201ENSMUST00000030779 1425 ntAPPRIS ALT2 TSL 1 (best) BASIC19.62■□□□□ 0.73
PrnpP04925 Nsfl1c-203ENSMUST00000103160 1369 ntTSL 5 BASIC19.62■□□□□ 0.73
PrnpP04925 Eefsec-206ENSMUST00000205179 2208 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
PrnpP04925 Lhpp-202ENSMUST00000106170 999 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
PrnpP04925 Pigp-202ENSMUST00000113906 745 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
PrnpP04925 Pigp-203ENSMUST00000113910 966 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
PrnpP04925 Tpgs1-201ENSMUST00000020552 1143 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
PrnpP04925 AC158538.1-201ENSMUST00000225870 294 ntBASIC19.62■□□□□ 0.73
PrnpP04925 Mrps33-201ENSMUST00000031978 1107 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
PrnpP04925 Cox8a-201ENSMUST00000039758 545 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
PrnpP04925 Rchy1-201ENSMUST00000031345 1967 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
PrnpP04925 Pacsin3-215ENSMUST00000168916 1859 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
PrnpP04925 Pacsin3-201ENSMUST00000028694 1862 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
PrnpP04925 6430573P05Rik-203ENSMUST00000195547 2457 ntBASIC19.62■□□□□ 0.73
PrnpP04925 Tmem164-206ENSMUST00000112896 5224 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
PrnpP04925 Rassf7-201ENSMUST00000046890 1525 ntAPPRIS P2 TSL 1 (best) BASIC19.61■□□□□ 0.73
PrnpP04925 Fam20b-201ENSMUST00000086153 4414 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
PrnpP04925 Unc50-203ENSMUST00000118059 1179 ntAPPRIS P1 TSL 5 BASIC19.61■□□□□ 0.73
PrnpP04925 Stard6-203ENSMUST00000168249 1167 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
PrnpP04925 AC154649.1-201ENSMUST00000227392 384 ntBASIC19.61■□□□□ 0.73
PrnpP04925 Lbx2-201ENSMUST00000041265 817 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
PrnpP04925 Pigt-202ENSMUST00000117066 1712 ntAPPRIS ALT2 TSL 1 (best) BASIC19.61■□□□□ 0.73
PrnpP04925 Cacna2d2-201ENSMUST00000010210 5783 ntAPPRIS ALT2 TSL 1 (best) BASIC19.61■□□□□ 0.73
PrnpP04925 Gm45472-201ENSMUST00000211295 1426 ntTSL 5 BASIC19.6■□□□□ 0.73
PrnpP04925 Nrn1-203ENSMUST00000223611 1443 ntBASIC19.6■□□□□ 0.73
PrnpP04925 N4bp1-201ENSMUST00000034074 6469 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
PrnpP04925 Suz12-201ENSMUST00000017692 4373 ntAPPRIS P3 TSL 1 (best) BASIC19.6■□□□□ 0.73
PrnpP04925 Gm2399-201ENSMUST00000104944 225 ntBASIC19.6■□□□□ 0.73
PrnpP04925 Gm12356-201ENSMUST00000122854 353 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
Retrieved 100 of 76,532 protein–RNA pairs in 16.7 ms