Protein–RNA interactions for Protein: P02831

Hoxa3, Homeobox protein Hox-A3, mousemouse

Predictions only

Length 443 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hoxa3P02831 Arl4d-201ENSMUST00000039388 1382 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Hoxa3P02831 Rps6ka2-201ENSMUST00000024575 5404 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Hoxa3P02831 Sys1-202ENSMUST00000109352 2001 ntAPPRIS P1 TSL 5 BASIC15.79■□□□□ 0.12
Hoxa3P02831 Rab5c-201ENSMUST00000019317 1967 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
Hoxa3P02831 Man2c1os-201ENSMUST00000125333 1910 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
Hoxa3P02831 Syt17-203ENSMUST00000203485 1932 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
Hoxa3P02831 Tmem203-201ENSMUST00000104998 854 ntAPPRIS P1 BASIC15.79■□□□□ 0.12
Hoxa3P02831 Atraid-201ENSMUST00000013766 966 ntAPPRIS P2 TSL 1 (best) BASIC15.79■□□□□ 0.12
Hoxa3P02831 Smim1-209ENSMUST00000145527 562 ntAPPRIS P1 TSL 2 BASIC15.79■□□□□ 0.12
Hoxa3P02831 Krtcap3-205ENSMUST00000201625 902 ntAPPRIS P1 TSL 5 BASIC15.79■□□□□ 0.12
Hoxa3P02831 Gm44732-201ENSMUST00000208055 635 ntTSL 3 BASIC15.79■□□□□ 0.12
Hoxa3P02831 4732440D04Rik-203ENSMUST00000191825 5428 ntBASIC15.79■□□□□ 0.12
Hoxa3P02831 Atoh8-201ENSMUST00000042646 2355 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Hoxa3P02831 Kmt5b-216ENSMUST00000176926 1551 ntAPPRIS ALT2 TSL 5 BASIC15.79■□□□□ 0.12
Hoxa3P02831 Ntn1-201ENSMUST00000021284 5738 ntAPPRIS P1 TSL 5 BASIC15.79■□□□□ 0.12
Hoxa3P02831 Stk35-201ENSMUST00000165413 2882 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Hoxa3P02831 Nudt19-201ENSMUST00000040962 2298 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Hoxa3P02831 Hrh3-201ENSMUST00000056480 2706 ntAPPRIS P2 TSL 1 (best) BASIC15.78■□□□□ 0.12
Hoxa3P02831 3010003L21Rik-201ENSMUST00000047953 1729 ntTSL 5 BASIC15.78■□□□□ 0.12
Hoxa3P02831 Gm12933-201ENSMUST00000120203 872 ntBASIC15.78■□□□□ 0.12
Hoxa3P02831 Prcd-205ENSMUST00000178875 1227 ntTSL 5 BASIC15.78■□□□□ 0.12
Hoxa3P02831 Tmem42-202ENSMUST00000213514 631 ntTSL 3 BASIC15.78■□□□□ 0.12
Hoxa3P02831 Rasef-203ENSMUST00000222414 2127 ntAPPRIS P1 TSL 5 BASIC15.78■□□□□ 0.12
Hoxa3P02831 Rbks-201ENSMUST00000031018 1042 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Hoxa3P02831 Med30-201ENSMUST00000037115 1007 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Hoxa3P02831 Cd37-204ENSMUST00000209779 2541 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
Hoxa3P02831 Gm16505-202ENSMUST00000220976 1626 ntTSL 5 BASIC15.78■□□□□ 0.12
Hoxa3P02831 Fbxw2-206ENSMUST00000113080 1923 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Hoxa3P02831 Zfp213-201ENSMUST00000095606 2672 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Hoxa3P02831 Eml4-203ENSMUST00000112363 5238 ntAPPRIS ALT2 TSL 1 (best) BASIC15.78■□□□□ 0.12
Hoxa3P02831 Zfp771-201ENSMUST00000052509 1484 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Hoxa3P02831 Arhgap23-203ENSMUST00000121799 5816 ntAPPRIS P1 TSL 5 BASIC15.78■□□□□ 0.12
Hoxa3P02831 Ccdc50-201ENSMUST00000039443 2192 ntTSL 1 (best) BASIC15.77■□□□□ 0.12
Hoxa3P02831 Stx1a-201ENSMUST00000005509 2162 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
Hoxa3P02831 Disc1-204ENSMUST00000115885 2408 ntAPPRIS ALT2 TSL 5 BASIC15.77■□□□□ 0.12
Hoxa3P02831 Disc1-202ENSMUST00000075730 2408 ntAPPRIS P3 TSL 5 BASIC15.77■□□□□ 0.12
Hoxa3P02831 Gm9725-202ENSMUST00000166229 2326 ntTSL 5 BASIC15.77■□□□□ 0.12
Hoxa3P02831 Map3k9-201ENSMUST00000035987 4564 ntAPPRIS P2 TSL 1 (best) BASIC15.77■□□□□ 0.12
Hoxa3P02831 S100a6-201ENSMUST00000001051 731 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
Hoxa3P02831 Hsp25-ps1-201ENSMUST00000109187 630 ntBASIC15.77■□□□□ 0.12
Hoxa3P02831 Lhx1-204ENSMUST00000184646 1201 ntTSL 5 BASIC15.77■□□□□ 0.12
Hoxa3P02831 C230062I16Rik-202ENSMUST00000207746 1022 ntTSL 1 (best) BASIC15.77■□□□□ 0.12
Hoxa3P02831 Fbxo6-202ENSMUST00000056965 1163 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
Hoxa3P02831 Cyp2r1-207ENSMUST00000211506 1887 ntTSL 5 BASIC15.77■□□□□ 0.11
Hoxa3P02831 Bspry-202ENSMUST00000107449 2167 ntAPPRIS ALT2 TSL 1 (best) BASIC15.77■□□□□ 0.11
Hoxa3P02831 Prpf19-201ENSMUST00000025642 2134 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.11
Hoxa3P02831 Pink1-201ENSMUST00000030536 2375 ntAPPRIS P2 TSL 1 (best) BASIC15.77■□□□□ 0.11
Hoxa3P02831 Mtfr1l-201ENSMUST00000102550 2025 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.11
Hoxa3P02831 Kirrel3-202ENSMUST00000115148 2851 ntAPPRIS P3 TSL 5 BASIC15.77■□□□□ 0.11
Hoxa3P02831 Itsn1-206ENSMUST00000113999 5393 ntTSL 5 BASIC15.76■□□□□ 0.11
Hoxa3P02831 Capzb-204ENSMUST00000102508 1674 ntAPPRIS ALT1 TSL 1 (best) BASIC15.76■□□□□ 0.11
Hoxa3P02831 Dvl3-203ENSMUST00000171572 2493 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
Hoxa3P02831 Zfp282-201ENSMUST00000061890 5573 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
Hoxa3P02831 Slc9a6-201ENSMUST00000077741 4976 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
Hoxa3P02831 Tnrc18-201ENSMUST00000151477 6487 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
Hoxa3P02831 Gm39115-201ENSMUST00000211350 699 ntAPPRIS P1 BASIC15.76■□□□□ 0.11
Hoxa3P02831 Cox4i1-201ENSMUST00000034276 745 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
Hoxa3P02831 Gm10602-201ENSMUST00000098239 609 ntBASIC15.76■□□□□ 0.11
Hoxa3P02831 Etnk1-203ENSMUST00000204947 1791 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
Hoxa3P02831 Stx2-202ENSMUST00000100680 2769 ntAPPRIS ALT2 TSL 1 (best) BASIC15.76■□□□□ 0.11
Hoxa3P02831 Ttc9-202ENSMUST00000218362 4754 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
Hoxa3P02831 Cd83-201ENSMUST00000015540 2477 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
Hoxa3P02831 Caskin1-201ENSMUST00000024958 6172 ntAPPRIS P1 TSL 5 BASIC15.76■□□□□ 0.11
Hoxa3P02831 Gls2-201ENSMUST00000044776 2573 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
Hoxa3P02831 Ttc39a-203ENSMUST00000106619 1778 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
Hoxa3P02831 C1qtnf12-201ENSMUST00000024338 1315 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
Hoxa3P02831 Mgat2-201ENSMUST00000060579 2614 ntAPPRIS P1 BASIC15.75■□□□□ 0.11
Hoxa3P02831 Romo1-202ENSMUST00000109597 550 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
Hoxa3P02831 Rpusd3-202ENSMUST00000113092 1269 ntAPPRIS P2 TSL 1 (best) BASIC15.75■□□□□ 0.11
Hoxa3P02831 Cox16-207ENSMUST00000169124 685 ntTSL 2 BASIC15.75■□□□□ 0.11
Hoxa3P02831 Gm42555-201ENSMUST00000199304 1039 ntBASIC15.75■□□□□ 0.11
Hoxa3P02831 Zfand3-202ENSMUST00000226208 923 ntAPPRIS P1 BASIC15.75■□□□□ 0.11
Hoxa3P02831 Atp8b2-202ENSMUST00000107396 5705 ntAPPRIS ALT2 TSL 5 BASIC15.75■□□□□ 0.11
Hoxa3P02831 Uqcrc1-201ENSMUST00000026743 1653 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
Hoxa3P02831 6820408C15Rik-201ENSMUST00000039961 1684 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
Hoxa3P02831 Rbm7-201ENSMUST00000170000 1773 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
Hoxa3P02831 Cdc37l1-205ENSMUST00000224599 1769 ntBASIC15.75■□□□□ 0.11
Hoxa3P02831 Slc39a10-201ENSMUST00000027131 5498 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
Hoxa3P02831 Brsk2-205ENSMUST00000172652 2501 ntTSL 5 BASIC15.74■□□□□ 0.11
Hoxa3P02831 Nkx2-1-202ENSMUST00000178477 2242 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
Hoxa3P02831 Mlf2-201ENSMUST00000032214 1451 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
Hoxa3P02831 Mrps16-201ENSMUST00000061444 2572 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
Hoxa3P02831 Eif3j2-201ENSMUST00000057110 2379 ntAPPRIS P1 BASIC15.74■□□□□ 0.11
Hoxa3P02831 E130307A14Rik-208ENSMUST00000145971 830 ntTSL 3 BASIC15.74■□□□□ 0.11
Hoxa3P02831 Areg-201ENSMUST00000031325 1215 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
Hoxa3P02831 Mmp15-201ENSMUST00000034243 5135 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
Hoxa3P02831 Tbc1d25-201ENSMUST00000039892 2648 ntAPPRIS P3 TSL 1 (best) BASIC15.74■□□□□ 0.11
Hoxa3P02831 1700008J07Rik-201ENSMUST00000185351 2432 ntBASIC15.74■□□□□ 0.11
Hoxa3P02831 Rhoa-201ENSMUST00000007959 2197 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Hoxa3P02831 Itga9-201ENSMUST00000044165 7020 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Hoxa3P02831 Ly6h-204ENSMUST00000127095 1336 ntAPPRIS P3 TSL 1 (best) BASIC15.73■□□□□ 0.11
Hoxa3P02831 Siah1b-201ENSMUST00000037928 1783 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Hoxa3P02831 Asph-217ENSMUST00000146441 2576 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
Hoxa3P02831 Gm13534-201ENSMUST00000121169 513 ntBASIC15.73■□□□□ 0.11
Hoxa3P02831 Rian-206ENSMUST00000182119 329 ntTSL 3 BASIC15.73■□□□□ 0.11
Hoxa3P02831 Gm27011-201ENSMUST00000182352 972 ntBASIC15.73■□□□□ 0.11
Hoxa3P02831 Sstr4-201ENSMUST00000109962 1424 ntAPPRIS P1 BASIC15.73■□□□□ 0.11
Hoxa3P02831 H2-Q7-201ENSMUST00000071951 1406 ntAPPRIS P2 TSL 1 (best) BASIC15.73■□□□□ 0.11
Hoxa3P02831 Rab34-202ENSMUST00000056241 1558 ntTSL 5 BASIC15.73■□□□□ 0.11
Hoxa3P02831 Dapk1-207ENSMUST00000226059 5009 ntBASIC15.73■□□□□ 0.11
Retrieved 100 of 76,532 protein–RNA pairs in 18.2 ms