Protein–RNA interactions for Protein: O89079

Cope, Coatomer subunit epsilon, mousemouse

Predictions only

Length 308 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CopeO89079 Alad-201ENSMUST00000030090 1206 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
CopeO89079 6330562C20Rik-201ENSMUST00000098867 784 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
CopeO89079 Ptgfrn-201ENSMUST00000102694 5902 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
CopeO89079 Arhgap21-201ENSMUST00000114594 7351 ntAPPRIS ALT2 TSL 5 BASIC19.48■□□□□ 0.71
CopeO89079 Cdkl3-207ENSMUST00000109080 2749 ntAPPRIS ALT2 TSL 1 (best) BASIC19.47■□□□□ 0.71
CopeO89079 Mt2-201ENSMUST00000034214 511 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
CopeO89079 Ntn5-201ENSMUST00000107742 1574 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
CopeO89079 Schip1-206ENSMUST00000182719 2156 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
CopeO89079 Atp11a-202ENSMUST00000091237 7443 ntAPPRIS P3 TSL 1 (best) BASIC19.47■□□□□ 0.71
CopeO89079 Stmn4-201ENSMUST00000074523 1303 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
CopeO89079 Gas2l1-203ENSMUST00000109895 2530 ntAPPRIS P3 TSL 1 (best) BASIC19.47■□□□□ 0.71
CopeO89079 Fgf11-201ENSMUST00000011285 2534 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
CopeO89079 Nr1h3-204ENSMUST00000111356 1955 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
CopeO89079 Tpbgl-201ENSMUST00000178124 3022 ntAPPRIS P1 BASIC19.46■□□□□ 0.71
CopeO89079 Gm10941-201ENSMUST00000105408 708 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
CopeO89079 Gm26558-201ENSMUST00000180559 861 ntAPPRIS P1 BASIC19.46■□□□□ 0.71
CopeO89079 4930519P11Rik-201ENSMUST00000181369 501 ntAPPRIS P1 BASIC19.46■□□□□ 0.71
CopeO89079 Golgb1-201ENSMUST00000023534 498 ntBASIC19.46■□□□□ 0.71
CopeO89079 Slc25a41-201ENSMUST00000058661 1225 ntAPPRIS P3 TSL 1 (best) BASIC19.46■□□□□ 0.71
CopeO89079 Cdkl3-206ENSMUST00000109079 2051 ntAPPRIS ALT2 TSL 5 BASIC19.46■□□□□ 0.71
CopeO89079 Cdkl3-208ENSMUST00000109081 2063 ntAPPRIS ALT2 TSL 5 BASIC19.46■□□□□ 0.71
CopeO89079 Tmod1-201ENSMUST00000107773 3158 ntAPPRIS P1 TSL 5 BASIC19.46■□□□□ 0.71
CopeO89079 Impdh2-201ENSMUST00000081111 1858 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
CopeO89079 Cyp4f16-201ENSMUST00000003416 2227 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
CopeO89079 Nkiras2-203ENSMUST00000107376 1727 ntAPPRIS P1 TSL 5 BASIC19.45■□□□□ 0.7
CopeO89079 Etnk1-203ENSMUST00000204947 1791 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
CopeO89079 Camta1-204ENSMUST00000105670 4961 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
CopeO89079 Spire1-203ENSMUST00000115050 5405 ntAPPRIS ALT2 TSL 1 (best) BASIC19.45■□□□□ 0.7
CopeO89079 Tmem62-201ENSMUST00000067582 2921 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
CopeO89079 4930412F12Rik-201ENSMUST00000211700 1471 ntBASIC19.45■□□□□ 0.7
CopeO89079 Anapc5-218ENSMUST00000200645 2404 ntAPPRIS ALT2 TSL 1 (best) BASIC19.45■□□□□ 0.7
CopeO89079 Sebox-202ENSMUST00000125670 1300 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
CopeO89079 Ikbip-202ENSMUST00000020150 1328 ntAPPRIS P3 TSL 1 (best) BASIC19.45■□□□□ 0.7
CopeO89079 Aire-203ENSMUST00000105396 1749 ntAPPRIS ALT2 TSL 1 (best) BASIC19.45■□□□□ 0.7
CopeO89079 Pgs1-203ENSMUST00000132676 2863 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
CopeO89079 Aire-214ENSMUST00000154374 1712 ntAPPRIS ALT2 TSL 1 (best) BASIC19.45■□□□□ 0.7
CopeO89079 Aire-215ENSMUST00000155021 1737 ntAPPRIS ALT2 TSL 1 (best) BASIC19.45■□□□□ 0.7
CopeO89079 Pou2f2-205ENSMUST00000108417 1937 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
CopeO89079 Ppa1-201ENSMUST00000020286 1364 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
CopeO89079 Mtg1-201ENSMUST00000036977 1595 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
CopeO89079 Abr-202ENSMUST00000072740 5394 ntAPPRIS P1 TSL 5 BASIC19.44■□□□□ 0.7
CopeO89079 Gm35558-201ENSMUST00000222675 2219 ntBASIC19.44■□□□□ 0.7
CopeO89079 Ptges3-201ENSMUST00000052798 2000 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
CopeO89079 4930452B06Rik-201ENSMUST00000102996 2681 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
CopeO89079 Arfrp1-209ENSMUST00000170190 2483 ntTSL 5 BASIC19.44■□□□□ 0.7
CopeO89079 Map6-206ENSMUST00000208605 2275 ntAPPRIS ALT2 TSL 1 (best) BASIC19.44■□□□□ 0.7
CopeO89079 Gm10575-201ENSMUST00000097947 1671 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
CopeO89079 BC034090-204ENSMUST00000186156 4873 ntAPPRIS P5 TSL 5 BASIC19.44■□□□□ 0.7
CopeO89079 Atrnl1-201ENSMUST00000077282 6581 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
CopeO89079 Prodh-206ENSMUST00000139861 677 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
CopeO89079 D630036H23Rik-201ENSMUST00000171007 940 ntAPPRIS P1 BASIC19.44■□□□□ 0.7
CopeO89079 Dctn3-203ENSMUST00000171641 885 ntTSL 3 BASIC19.44■□□□□ 0.7
CopeO89079 Cyc1-201ENSMUST00000023210 1194 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
CopeO89079 Lbx2-201ENSMUST00000041265 817 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
CopeO89079 Gm26694-201ENSMUST00000180868 1902 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
CopeO89079 AU019823-202ENSMUST00000145139 2805 ntTSL 2 BASIC19.44■□□□□ 0.7
CopeO89079 Gp5-201ENSMUST00000061190 2196 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
CopeO89079 Mgll-202ENSMUST00000113581 1308 ntTSL 5 BASIC19.44■□□□□ 0.7
CopeO89079 Mark2-203ENSMUST00000051711 2867 ntAPPRIS P4 TSL 1 (best) BASIC19.44■□□□□ 0.7
CopeO89079 Fbxo7-202ENSMUST00000117597 1799 ntAPPRIS ALT2 TSL 1 (best) BASIC19.44■□□□□ 0.7
CopeO89079 Lrrc58-201ENSMUST00000078717 8604 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
CopeO89079 Matk-205ENSMUST00000121205 1841 ntAPPRIS ALT2 TSL 1 (best) BASIC19.44■□□□□ 0.7
CopeO89079 Tesk1-201ENSMUST00000060864 3947 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
CopeO89079 Xrcc6-202ENSMUST00000100399 3296 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
CopeO89079 Cyp4f15-204ENSMUST00000168171 2168 ntAPPRIS P3 TSL 1 (best) BASIC19.43■□□□□ 0.7
CopeO89079 Notch4-201ENSMUST00000015612 6591 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
CopeO89079 Fbxo17-201ENSMUST00000032818 1958 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
CopeO89079 Gm45102-201ENSMUST00000207427 857 ntBASIC19.43■□□□□ 0.7
CopeO89079 Bag1-201ENSMUST00000030125 1295 ntAPPRIS ALT2 TSL 1 (best) BASIC19.43■□□□□ 0.7
CopeO89079 Hpca-204ENSMUST00000116444 1847 ntAPPRIS P1 TSL 5 BASIC19.43■□□□□ 0.7
CopeO89079 Hes3-201ENSMUST00000094438 1829 ntAPPRIS P2 TSL 1 (best) BASIC19.43■□□□□ 0.7
CopeO89079 Lhfp-201ENSMUST00000059562 2108 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
CopeO89079 B4galt4-205ENSMUST00000114712 2168 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
CopeO89079 Snrnp70-201ENSMUST00000074575 1735 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
CopeO89079 S1pr4-201ENSMUST00000053646 2386 ntAPPRIS P1 BASIC19.42■□□□□ 0.7
CopeO89079 Ripk2-201ENSMUST00000037035 2692 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
CopeO89079 Pparg-202ENSMUST00000171644 2125 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
CopeO89079 Fbxo30-201ENSMUST00000070300 2492 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
CopeO89079 Naa20-202ENSMUST00000110000 1142 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
CopeO89079 Gm14117-201ENSMUST00000122417 843 ntBASIC19.42■□□□□ 0.7
CopeO89079 AC161180.2-201ENSMUST00000222567 1015 ntAPPRIS P1 BASIC19.42■□□□□ 0.7
CopeO89079 Rps2-ps6-201ENSMUST00000095471 855 ntBASIC19.42■□□□□ 0.7
CopeO89079 Usp36-201ENSMUST00000092382 5609 ntAPPRIS P1 TSL 5 BASIC19.42■□□□□ 0.7
CopeO89079 Fam53a-202ENSMUST00000065119 2009 ntAPPRIS P2 TSL 1 (best) BASIC19.42■□□□□ 0.7
CopeO89079 Ezh2-204ENSMUST00000114618 2775 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
CopeO89079 Hcn2-202ENSMUST00000099513 3195 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
CopeO89079 Klhl36-201ENSMUST00000034287 2181 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
CopeO89079 Miga1-201ENSMUST00000068243 2689 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
CopeO89079 Asap2-204ENSMUST00000101562 5552 ntAPPRIS ALT2 TSL 1 (best) BASIC19.41■□□□□ 0.7
CopeO89079 Src-203ENSMUST00000109529 2020 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
CopeO89079 Dtwd2-201ENSMUST00000025383 2476 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
CopeO89079 Nkx6-2-202ENSMUST00000106095 1299 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
CopeO89079 Gm6569-201ENSMUST00000154520 811 ntAPPRIS P1 TSL 3 BASIC19.41■□□□□ 0.7
CopeO89079 Gm9207-201ENSMUST00000198773 1115 ntBASIC19.41■□□□□ 0.7
CopeO89079 Cxxc1-201ENSMUST00000025444 2618 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
CopeO89079 Cnot11-201ENSMUST00000003219 3162 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
CopeO89079 Kcns1-201ENSMUST00000045196 2712 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
CopeO89079 Znrf1-205ENSMUST00000172856 4600 ntAPPRIS P1 TSL 5 BASIC19.41■□□□□ 0.7
CopeO89079 Emc10-201ENSMUST00000118515 1662 ntAPPRIS ALT2 TSL 1 (best) BASIC19.4■□□□□ 0.7
CopeO89079 Ica1-203ENSMUST00000115519 1706 ntAPPRIS ALT2 TSL 5 BASIC19.4■□□□□ 0.7
Retrieved 100 of 76,532 protein–RNA pairs in 23.5 ms