Protein–RNA interactions for Protein: O88935

Syn1, Synapsin-1, mousemouse

Predictions only

Length 706 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Syn1O88935 Sfrp5-201ENSMUST00000018966 1900 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Syn1O88935 Spock1-204ENSMUST00000186271 2005 ntAPPRIS P3 TSL 1 (best) BASIC19.54■□□□□ 0.72
Syn1O88935 Hoxa5-201ENSMUST00000048794 1877 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Syn1O88935 3010003L21Rik-201ENSMUST00000047953 1729 ntTSL 5 BASIC19.54■□□□□ 0.72
Syn1O88935 Spry1-201ENSMUST00000038569 2481 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Syn1O88935 Whrn-204ENSMUST00000095037 2419 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
Syn1O88935 Bcl10-201ENSMUST00000029842 1949 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Syn1O88935 Znrf3-201ENSMUST00000109867 6311 ntAPPRIS P3 TSL 5 BASIC19.53■□□□□ 0.72
Syn1O88935 Smim14-202ENSMUST00000121661 1056 ntAPPRIS P1 TSL 3 BASIC19.53■□□□□ 0.72
Syn1O88935 Gm11527-201ENSMUST00000153795 596 ntTSL 2 BASIC19.53■□□□□ 0.72
Syn1O88935 Atp5l-201ENSMUST00000043675 544 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Syn1O88935 March2-206ENSMUST00000173329 2566 ntTSL 2 BASIC19.53■□□□□ 0.72
Syn1O88935 Intu-201ENSMUST00000061590 1589 ntAPPRIS ALT2 TSL 2 BASIC19.53■□□□□ 0.72
Syn1O88935 Ksr1-201ENSMUST00000018478 5495 ntAPPRIS P1 TSL 5 BASIC19.52■□□□□ 0.72
Syn1O88935 Mprip-202ENSMUST00000072031 8718 ntAPPRIS P4 TSL 1 (best) BASIC19.52■□□□□ 0.72
Syn1O88935 Polg2-201ENSMUST00000021060 1506 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
Syn1O88935 Ttc14-211ENSMUST00000200271 2724 ntAPPRIS ALT2 TSL 1 (best) BASIC19.52■□□□□ 0.72
Syn1O88935 1600023N17Rik-201ENSMUST00000196242 1007 ntBASIC19.52■□□□□ 0.72
Syn1O88935 Fdxacb1-203ENSMUST00000176335 1817 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
Syn1O88935 Reep6-207ENSMUST00000186864 2015 ntAPPRIS P3 TSL 1 (best) BASIC19.52■□□□□ 0.72
Syn1O88935 Hsf1-201ENSMUST00000072838 2018 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
Syn1O88935 Zfp771-201ENSMUST00000052509 1484 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
Syn1O88935 Tead2-201ENSMUST00000033060 2140 ntAPPRIS P3 TSL 1 (best) BASIC19.52■□□□□ 0.72
Syn1O88935 Tradd-201ENSMUST00000034359 1689 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.71
Syn1O88935 Tbc1d2b-201ENSMUST00000041767 5956 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Syn1O88935 Slc35b2-201ENSMUST00000041353 2326 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
Syn1O88935 Cnnm1-202ENSMUST00000223787 2931 ntAPPRIS ALT2 BASIC19.51■□□□□ 0.71
Syn1O88935 Gm6728-201ENSMUST00000178117 1065 ntBASIC19.51■□□□□ 0.71
Syn1O88935 Crybb1-201ENSMUST00000031286 882 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Syn1O88935 Avp-201ENSMUST00000046001 577 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Syn1O88935 Dnajb2-201ENSMUST00000055223 1199 ntTSL 5 BASIC19.51■□□□□ 0.71
Syn1O88935 Arid3c-204ENSMUST00000171251 1751 ntAPPRIS P3 TSL 5 BASIC19.51■□□□□ 0.71
Syn1O88935 Cacnb1-202ENSMUST00000092736 1880 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
Syn1O88935 Spry1-203ENSMUST00000108109 2451 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Syn1O88935 Fam193b-201ENSMUST00000021957 4341 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Syn1O88935 Chsy1-201ENSMUST00000036372 4176 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Syn1O88935 Arid3c-202ENSMUST00000150809 1327 ntAPPRIS ALT2 TSL 1 (best) BASIC19.51■□□□□ 0.71
Syn1O88935 Gm10125-201ENSMUST00000074702 2286 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
Syn1O88935 Snhg20-203ENSMUST00000182811 2153 ntBASIC19.5■□□□□ 0.71
Syn1O88935 Ets1-202ENSMUST00000050797 1976 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
Syn1O88935 Dus1l-203ENSMUST00000106135 1863 ntAPPRIS ALT2 TSL 5 BASIC19.5■□□□□ 0.71
Syn1O88935 Zbtb7a-204ENSMUST00000121840 1676 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
Syn1O88935 Gm42884-202ENSMUST00000202523 423 ntTSL 3 BASIC19.5■□□□□ 0.71
Syn1O88935 AC142113.1-201ENSMUST00000214931 801 ntTSL 5 BASIC19.5■□□□□ 0.71
Syn1O88935 Mall-201ENSMUST00000028856 2006 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
Syn1O88935 Faap24-201ENSMUST00000032704 1857 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
Syn1O88935 Pou3f3-201ENSMUST00000054883 7409 ntAPPRIS P1 BASIC19.5■□□□□ 0.71
Syn1O88935 Nipsnap2-201ENSMUST00000086046 2112 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Syn1O88935 Prkab1-201ENSMUST00000031486 2089 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Syn1O88935 Snca-201ENSMUST00000114268 1280 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Syn1O88935 Gm7860-201ENSMUST00000121190 879 ntBASIC19.49■□□□□ 0.71
Syn1O88935 Zfp428-203ENSMUST00000177205 1159 ntAPPRIS ALT2 TSL 1 (best) BASIC19.49■□□□□ 0.71
Syn1O88935 Cdkl3-202ENSMUST00000063321 2008 ntAPPRIS ALT2 TSL 1 (best) BASIC19.49■□□□□ 0.71
Syn1O88935 Sec22c-202ENSMUST00000111560 2669 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Syn1O88935 Grin2c-202ENSMUST00000106554 4895 ntAPPRIS P1 TSL 5 BASIC19.48■□□□□ 0.71
Syn1O88935 Arrb2-205ENSMUST00000108568 1777 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
Syn1O88935 Mir142hg-201ENSMUST00000123700 269 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
Syn1O88935 Stard3nl-208ENSMUST00000200323 1128 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
Syn1O88935 Gm44549-201ENSMUST00000208351 577 ntBASIC19.48■□□□□ 0.71
Syn1O88935 Bax-201ENSMUST00000033093 867 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Syn1O88935 Psenen-201ENSMUST00000043898 708 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Syn1O88935 Grhpr-201ENSMUST00000045078 1280 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Syn1O88935 March11-202ENSMUST00000140840 1558 ntAPPRIS P3 TSL 2 BASIC19.48■□□□□ 0.71
Syn1O88935 Wrnip1-201ENSMUST00000021832 2633 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Syn1O88935 Cntfr-203ENSMUST00000102961 1995 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Syn1O88935 Runx1-203ENSMUST00000168195 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC19.48■□□□□ 0.71
Syn1O88935 B430319F04Rik-201ENSMUST00000209731 2669 ntBASIC19.47■□□□□ 0.71
Syn1O88935 Cenps-201ENSMUST00000030813 1110 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Syn1O88935 Capg-202ENSMUST00000114071 1400 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Syn1O88935 3110053B16Rik-202ENSMUST00000140360 2004 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
Syn1O88935 Trp73os-201ENSMUST00000143429 2192 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
Syn1O88935 Ccdc112-201ENSMUST00000072835 2801 ntAPPRIS P1 TSL 5 BASIC19.47■□□□□ 0.71
Syn1O88935 Tfdp2-202ENSMUST00000165120 2341 ntAPPRIS ALT2 TSL 1 (best) BASIC19.46■□□□□ 0.71
Syn1O88935 Tekt5-202ENSMUST00000115831 1277 ntAPPRIS P3 TSL 1 (best) BASIC19.46■□□□□ 0.71
Syn1O88935 Gm20390-201ENSMUST00000170303 991 ntAPPRIS P1 TSL 5 BASIC19.46■□□□□ 0.71
Syn1O88935 AC061963.1-203ENSMUST00000213473 453 ntTSL 3 BASIC19.46■□□□□ 0.71
Syn1O88935 AC154266.1-201ENSMUST00000223190 503 ntBASIC19.46■□□□□ 0.71
Syn1O88935 Pfdn6-201ENSMUST00000025163 807 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Syn1O88935 Magi3-202ENSMUST00000121198 5912 ntAPPRIS ALT2 TSL 5 BASIC19.46■□□□□ 0.71
Syn1O88935 Pomgnt1-203ENSMUST00000106498 2719 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Syn1O88935 Disc1-204ENSMUST00000115885 2408 ntAPPRIS ALT2 TSL 5 BASIC19.46■□□□□ 0.71
Syn1O88935 Disc1-202ENSMUST00000075730 2408 ntAPPRIS P3 TSL 5 BASIC19.46■□□□□ 0.71
Syn1O88935 Dirc2-201ENSMUST00000023554 5395 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Syn1O88935 Gm37035-201ENSMUST00000194809 2148 ntBASIC19.45■□□□□ 0.7
Syn1O88935 Gm13158-201ENSMUST00000122007 736 ntBASIC19.45■□□□□ 0.7
Syn1O88935 Psen2-202ENSMUST00000111104 1475 ntAPPRIS ALT1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Syn1O88935 4930518J20Rik-201ENSMUST00000195064 1478 ntBASIC19.45■□□□□ 0.7
Syn1O88935 Usp39-201ENSMUST00000070345 2244 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Syn1O88935 3830408C21Rik-205ENSMUST00000225426 1898 ntBASIC19.45■□□□□ 0.7
Syn1O88935 Dbndd2-201ENSMUST00000017878 1338 ntAPPRIS P1 TSL 2 BASIC19.45■□□□□ 0.7
Syn1O88935 Zfp467-202ENSMUST00000114556 2287 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
Syn1O88935 Cbln2-201ENSMUST00000068423 2475 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Syn1O88935 Gpr162-201ENSMUST00000046893 2676 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Syn1O88935 Rbfox3-206ENSMUST00000120061 2150 ntAPPRIS ALT2 TSL 5 BASIC19.44■□□□□ 0.7
Syn1O88935 Mpz-201ENSMUST00000070758 2002 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Syn1O88935 Gpatch2-201ENSMUST00000044812 1639 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
Syn1O88935 Cdan1-201ENSMUST00000110700 5996 ntAPPRIS ALT2 TSL 5 BASIC19.44■□□□□ 0.7
Syn1O88935 Acsl3-203ENSMUST00000134566 2492 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
Syn1O88935 Pacsin3-215ENSMUST00000168916 1859 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Syn1O88935 Pacsin3-201ENSMUST00000028694 1862 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Retrieved 100 of 76,532 protein–RNA pairs in 23.6 ms