Protein–RNA interactions for Protein: O88627

Slc28a2, Sodium/nucleoside cotransporter 2, mousemouse

Predictions only

Length 660 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Slc28a2O88627 Cox5b-204ENSMUST00000193210 865 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Slc28a2O88627 AC158777.2-201ENSMUST00000228787 398 ntAPPRIS P1 BASIC16.75■□□□□ 0.27
Slc28a2O88627 Proca1-201ENSMUST00000060539 960 ntAPPRIS ALT2 TSL 2 BASIC16.75■□□□□ 0.27
Slc28a2O88627 Gm3448-202ENSMUST00000097400 747 ntAPPRIS ALT2 TSL 5 BASIC16.75■□□□□ 0.27
Slc28a2O88627 Rab34-202ENSMUST00000056241 1558 ntTSL 5 BASIC16.75■□□□□ 0.27
Slc28a2O88627 Mplkip-201ENSMUST00000049744 2672 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Slc28a2O88627 Kansl1l-201ENSMUST00000068168 4459 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Slc28a2O88627 Nsmf-206ENSMUST00000114388 2781 ntAPPRIS ALT2 TSL 1 (best) BASIC16.75■□□□□ 0.27
Slc28a2O88627 Pnldc1-201ENSMUST00000163394 1689 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Slc28a2O88627 AA386476-201ENSMUST00000098781 1665 ntBASIC16.75■□□□□ 0.27
Slc28a2O88627 Tekt5-201ENSMUST00000043415 1803 ntAPPRIS ALT2 TSL 1 (best) BASIC16.75■□□□□ 0.27
Slc28a2O88627 Pard3-209ENSMUST00000160272 5815 ntAPPRIS ALT2 TSL 1 (best) BASIC16.74■□□□□ 0.27
Slc28a2O88627 Dzip3-202ENSMUST00000121869 5820 ntAPPRIS ALT2 TSL 5 BASIC16.74■□□□□ 0.27
Slc28a2O88627 Pdpk1-205ENSMUST00000115411 1724 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
Slc28a2O88627 Meis3-201ENSMUST00000002495 1731 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Slc28a2O88627 Larp6-201ENSMUST00000038407 2440 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Slc28a2O88627 Kdelr3-201ENSMUST00000010974 1414 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Slc28a2O88627 Dtymk-202ENSMUST00000112890 1055 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
Slc28a2O88627 Taf3-203ENSMUST00000114907 695 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
Slc28a2O88627 Gm12821-201ENSMUST00000120022 600 ntBASIC16.74■□□□□ 0.27
Slc28a2O88627 Magi3-203ENSMUST00000122303 3827 ntAPPRIS P3 TSL 1 (best) BASIC16.74■□□□□ 0.27
Slc28a2O88627 Igfbp7-202ENSMUST00000163898 1200 ntAPPRIS P4 TSL 5 BASIC16.74■□□□□ 0.27
Slc28a2O88627 AC122379.1-201ENSMUST00000220658 355 ntTSL 3 BASIC16.74■□□□□ 0.27
Slc28a2O88627 Trmt11-201ENSMUST00000019927 2359 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Slc28a2O88627 Maf1-205ENSMUST00000160853 1651 ntAPPRIS P2 TSL 1 (best) BASIC16.74■□□□□ 0.27
Slc28a2O88627 Nfe2-201ENSMUST00000075192 1697 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Slc28a2O88627 Nsfl1c-202ENSMUST00000089140 1486 ntAPPRIS P3 TSL 5 BASIC16.73■□□□□ 0.27
Slc28a2O88627 Ppp2r1b-209ENSMUST00000176349 1890 ntAPPRIS ALT2 TSL 5 BASIC16.73■□□□□ 0.27
Slc28a2O88627 Mmadhc-201ENSMUST00000102769 1342 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Slc28a2O88627 Bag1-202ENSMUST00000108089 1336 ntAPPRIS ALT2 TSL 1 (best) BASIC16.73■□□□□ 0.27
Slc28a2O88627 Sox17-208ENSMUST00000195555 1977 ntTSL 5 BASIC16.73■□□□□ 0.27
Slc28a2O88627 Gfi1-201ENSMUST00000031205 2860 ntAPPRIS P3 TSL 1 (best) BASIC16.73■□□□□ 0.27
Slc28a2O88627 Pigp-204ENSMUST00000113914 912 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
Slc28a2O88627 Rfxap-204ENSMUST00000217267 696 ntAPPRIS P2 TSL 1 (best) BASIC16.73■□□□□ 0.27
Slc28a2O88627 Ppfia1-201ENSMUST00000168134 5181 ntAPPRIS P3 TSL 1 (best) BASIC16.73■□□□□ 0.27
Slc28a2O88627 C230037L18Rik-201ENSMUST00000136218 1886 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
Slc28a2O88627 Ankrd9-204ENSMUST00000140788 1451 ntAPPRIS P2 TSL 3 BASIC16.73■□□□□ 0.27
Slc28a2O88627 Rdh14-201ENSMUST00000020947 1480 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Slc28a2O88627 Kcns2-201ENSMUST00000072868 5456 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Slc28a2O88627 1700086O06Rik-202ENSMUST00000181871 1564 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
Slc28a2O88627 Rab40c-207ENSMUST00000167626 2506 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Slc28a2O88627 Chtop-202ENSMUST00000049937 2012 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Slc28a2O88627 Cyb5d2-201ENSMUST00000079681 2393 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Slc28a2O88627 Ssx2ip-201ENSMUST00000039021 3410 ntAPPRIS ALT2 TSL 1 (best) BASIC16.72■□□□□ 0.27
Slc28a2O88627 Gnao1-207ENSMUST00000138659 5526 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
Slc28a2O88627 Kdm1a-202ENSMUST00000105847 3028 ntAPPRIS ALT2 TSL 5 BASIC16.72■□□□□ 0.27
Slc28a2O88627 Asphd1-203ENSMUST00000106340 1647 ntAPPRIS ALT2 TSL 1 (best) BASIC16.72■□□□□ 0.27
Slc28a2O88627 Tusc3-202ENSMUST00000169034 1262 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
Slc28a2O88627 Spcs1-204ENSMUST00000226782 949 ntBASIC16.72■□□□□ 0.27
Slc28a2O88627 Fgf3-201ENSMUST00000105898 2299 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Slc28a2O88627 Gm10300-201ENSMUST00000094662 2296 ntAPPRIS P1 BASIC16.72■□□□□ 0.27
Slc28a2O88627 Eif4h-205ENSMUST00000202622 2726 ntAPPRIS P3 TSL 1 (best) BASIC16.72■□□□□ 0.27
Slc28a2O88627 4930412F12Rik-201ENSMUST00000211700 1471 ntBASIC16.72■□□□□ 0.27
Slc28a2O88627 Aebp2-202ENSMUST00000087614 3727 ntAPPRIS P4 TSL 1 (best) BASIC16.72■□□□□ 0.27
Slc28a2O88627 Kctd15-201ENSMUST00000032709 2480 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Slc28a2O88627 Nkx2-1-202ENSMUST00000178477 2242 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Slc28a2O88627 Mgll-202ENSMUST00000113581 1308 ntTSL 5 BASIC16.71■□□□□ 0.27
Slc28a2O88627 Moap1-201ENSMUST00000173760 1312 ntAPPRIS P1 TSL 2 BASIC16.71■□□□□ 0.27
Slc28a2O88627 Snx21-206ENSMUST00000174070 1446 ntTSL 5 BASIC16.71■□□□□ 0.27
Slc28a2O88627 Adrm1-201ENSMUST00000061437 1535 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Slc28a2O88627 Fbxl5-204ENSMUST00000119523 2801 ntTSL 5 BASIC16.71■□□□□ 0.27
Slc28a2O88627 Cacnb3-201ENSMUST00000003442 2819 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Slc28a2O88627 Map6-206ENSMUST00000208605 2275 ntAPPRIS ALT2 TSL 1 (best) BASIC16.71■□□□□ 0.27
Slc28a2O88627 Tmem196-202ENSMUST00000183694 845 ntTSL 3 BASIC16.71■□□□□ 0.27
Slc28a2O88627 Appbp2os-202ENSMUST00000206972 447 ntBASIC16.71■□□□□ 0.27
Slc28a2O88627 Gpx4-201ENSMUST00000097227 995 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
Slc28a2O88627 Hes1-201ENSMUST00000023171 1468 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Slc28a2O88627 Nxph4-201ENSMUST00000095266 1675 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Slc28a2O88627 Xpo4-209ENSMUST00000174545 8680 ntAPPRIS P2 TSL 1 (best) BASIC16.71■□□□□ 0.27
Slc28a2O88627 Hoxa5-201ENSMUST00000048794 1877 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Slc28a2O88627 Ankrd17-202ENSMUST00000081914 8057 ntAPPRIS ALT2 TSL 5 BASIC16.71■□□□□ 0.27
Slc28a2O88627 Clcn4-206ENSMUST00000210594 2539 ntAPPRIS ALT2 TSL 5 BASIC16.7■□□□□ 0.26
Slc28a2O88627 Snx16-202ENSMUST00000099223 2512 ntAPPRIS ALT2 TSL 1 (best) BASIC16.7■□□□□ 0.26
Slc28a2O88627 Eif3b-201ENSMUST00000100507 2945 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Slc28a2O88627 Hnrnph3-202ENSMUST00000118898 2168 ntAPPRIS ALT1 TSL 5 BASIC16.7■□□□□ 0.26
Slc28a2O88627 Sost-201ENSMUST00000001534 2066 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Slc28a2O88627 2310015A10Rik-201ENSMUST00000180643 1399 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
Slc28a2O88627 C1qtnf4-201ENSMUST00000111466 1290 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Slc28a2O88627 Polr3gl-204ENSMUST00000145001 607 ntTSL 3 BASIC16.7■□□□□ 0.26
Slc28a2O88627 Vgf-204ENSMUST00000190827 2834 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Slc28a2O88627 Nectin3-202ENSMUST00000023335 9116 ntAPPRIS ALT2 TSL 1 (best) BASIC16.7■□□□□ 0.26
Slc28a2O88627 Tada2b-201ENSMUST00000031097 3791 ntAPPRIS P1 TSL 2 BASIC16.7■□□□□ 0.26
Slc28a2O88627 Fbxo22-204ENSMUST00000146201 2009 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
Slc28a2O88627 Kcnb1-201ENSMUST00000059826 4015 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Slc28a2O88627 Ciz1-205ENSMUST00000113338 2666 ntAPPRIS P3 TSL 5 BASIC16.7■□□□□ 0.26
Slc28a2O88627 Snx30-201ENSMUST00000030080 7314 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Slc28a2O88627 Eif5a-210ENSMUST00000108613 1343 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Slc28a2O88627 Lhx8-201ENSMUST00000177846 2076 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
Slc28a2O88627 Tmem245-202ENSMUST00000107609 2643 ntAPPRIS P2 TSL 5 BASIC16.69■□□□□ 0.26
Slc28a2O88627 Usp6nl-202ENSMUST00000114937 7484 ntAPPRIS ALT2 TSL 1 (best) BASIC16.69■□□□□ 0.26
Slc28a2O88627 Rhbdd3-202ENSMUST00000101610 2333 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Slc28a2O88627 Rer1-201ENSMUST00000030914 1596 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Slc28a2O88627 Rarb-207ENSMUST00000225921 2756 ntBASIC16.69■□□□□ 0.26
Slc28a2O88627 Zfp653-201ENSMUST00000043922 2108 ntAPPRIS P3 TSL 1 (best) BASIC16.69■□□□□ 0.26
Slc28a2O88627 Baiap2-201ENSMUST00000026436 2394 ntAPPRIS P4 TSL 1 (best) BASIC16.69■□□□□ 0.26
Slc28a2O88627 Ssbp1-203ENSMUST00000117411 933 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Slc28a2O88627 Cnih2-201ENSMUST00000025805 1237 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Slc28a2O88627 Ttc39b-201ENSMUST00000030205 842 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
Slc28a2O88627 Bri3-201ENSMUST00000056578 955 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Slc28a2O88627 A530010L16Rik-201ENSMUST00000212007 2336 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
Retrieved 100 of 76,532 protein–RNA pairs in 19.3 ms