Protein–RNA interactions for Protein: O88456

Capns1, Calpain small subunit 1, mousemouse

Predictions only

Length 269 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Capns1O88456 Gabra4-205ENSMUST00000199357 2407 ntAPPRIS ALT2 TSL 1 (best) BASIC17.4■□□□□ 0.38
Capns1O88456 Rncr4-201ENSMUST00000194541 2234 ntBASIC17.4■□□□□ 0.38
Capns1O88456 Tnfsf11-201ENSMUST00000022592 2236 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Capns1O88456 Tesk1-201ENSMUST00000060864 3947 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Capns1O88456 Neil2-201ENSMUST00000038229 1932 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Capns1O88456 Rxrb-203ENSMUST00000173354 1743 ntAPPRIS ALT2 TSL 1 (best) BASIC17.39■□□□□ 0.37
Capns1O88456 Ube2q2-201ENSMUST00000059555 3456 ntAPPRIS P3 TSL 1 (best) BASIC17.39■□□□□ 0.37
Capns1O88456 Dennd2a-201ENSMUST00000036877 4468 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Capns1O88456 Gm4285-201ENSMUST00000131222 902 ntTSL 2 BASIC17.39■□□□□ 0.37
Capns1O88456 Polr3gl-204ENSMUST00000145001 607 ntTSL 3 BASIC17.39■□□□□ 0.37
Capns1O88456 Tusc2-203ENSMUST00000193418 410 ntTSL 3 BASIC17.39■□□□□ 0.37
Capns1O88456 Gm10657-201ENSMUST00000193528 1031 ntBASIC17.39■□□□□ 0.37
Capns1O88456 AC164629.5-201ENSMUST00000220387 632 ntBASIC17.39■□□□□ 0.37
Capns1O88456 Spata33-201ENSMUST00000060133 491 ntAPPRIS P2 TSL 1 (best) BASIC17.39■□□□□ 0.37
Capns1O88456 Gm9870-201ENSMUST00000063874 645 ntBASIC17.39■□□□□ 0.37
Capns1O88456 Gabarapl1-201ENSMUST00000032264 1820 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Capns1O88456 Sema6d-203ENSMUST00000077847 6444 ntTSL 5 BASIC17.39■□□□□ 0.37
Capns1O88456 1810055G02Rik-201ENSMUST00000039048 1882 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Capns1O88456 Ppp2r1b-206ENSMUST00000175645 1931 ntAPPRIS ALT2 TSL 5 BASIC17.39■□□□□ 0.37
Capns1O88456 1600012H06Rik-202ENSMUST00000164837 2523 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Capns1O88456 Hbs1l-202ENSMUST00000061324 1998 ntTSL 3 BASIC17.39■□□□□ 0.37
Capns1O88456 Mmp15-201ENSMUST00000034243 5135 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Capns1O88456 Krt77-201ENSMUST00000087996 2930 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Capns1O88456 Kat14-201ENSMUST00000028911 3801 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Capns1O88456 Gm26646-201ENSMUST00000180715 1490 ntTSL 5 BASIC17.38■□□□□ 0.37
Capns1O88456 Gas1-201ENSMUST00000065086 2961 ntAPPRIS ALT2 BASIC17.38■□□□□ 0.37
Capns1O88456 Tmtc1-201ENSMUST00000060095 8383 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Capns1O88456 Alkbh5-201ENSMUST00000044250 5730 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Capns1O88456 Tpbgl-201ENSMUST00000178124 3022 ntAPPRIS P1 BASIC17.38■□□□□ 0.37
Capns1O88456 Ciapin1-201ENSMUST00000034233 1807 ntAPPRIS P1 TSL 5 BASIC17.38■□□□□ 0.37
Capns1O88456 Hoxa5-201ENSMUST00000048794 1877 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Capns1O88456 Rrad-201ENSMUST00000034351 1577 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Capns1O88456 Pdp1-206ENSMUST00000108302 2525 ntTSL 3 BASIC17.38■□□□□ 0.37
Capns1O88456 Gm17055-201ENSMUST00000166951 2232 ntTSL 5 BASIC17.38■□□□□ 0.37
Capns1O88456 Gng5-203ENSMUST00000119130 593 ntTSL 2 BASIC17.38■□□□□ 0.37
Capns1O88456 Gm21168-201ENSMUST00000199646 1096 ntBASIC17.38■□□□□ 0.37
Capns1O88456 Gm4553-202ENSMUST00000210925 1044 ntAPPRIS P5 BASIC17.38■□□□□ 0.37
Capns1O88456 AC124603.1-201ENSMUST00000223843 308 ntBASIC17.38■□□□□ 0.37
Capns1O88456 Xylt1-201ENSMUST00000032892 9020 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Capns1O88456 Slc5a10-201ENSMUST00000051552 2261 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Capns1O88456 Htr6-202ENSMUST00000105802 2341 ntAPPRIS P1 TSL 5 BASIC17.38■□□□□ 0.37
Capns1O88456 Prss32-201ENSMUST00000061725 1689 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Capns1O88456 Zfpm1-201ENSMUST00000054052 3390 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Capns1O88456 Pigt-202ENSMUST00000117066 1712 ntAPPRIS ALT2 TSL 1 (best) BASIC17.38■□□□□ 0.37
Capns1O88456 Prss12-201ENSMUST00000029603 2602 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Capns1O88456 Impdh2-201ENSMUST00000081111 1858 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Capns1O88456 Fam78b-205ENSMUST00000165874 4986 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Capns1O88456 Mgme1-203ENSMUST00000110028 2308 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Capns1O88456 Tmtc1-202ENSMUST00000100772 8269 ntTSL 2 BASIC17.37■□□□□ 0.37
Capns1O88456 Eomes-202ENSMUST00000111763 2869 ntAPPRIS ALT2 TSL 1 (best) BASIC17.37■□□□□ 0.37
Capns1O88456 Syndig1-202ENSMUST00000109935 2050 ntAPPRIS P1 TSL 5 BASIC17.37■□□□□ 0.37
Capns1O88456 E130218I03Rik-201ENSMUST00000122952 943 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Capns1O88456 Gm14205-201ENSMUST00000138427 739 ntTSL 3 BASIC17.37■□□□□ 0.37
Capns1O88456 Thap8-201ENSMUST00000014072 1182 ntAPPRIS ALT2 TSL 5 BASIC17.37■□□□□ 0.37
Capns1O88456 Kiss1-203ENSMUST00000193888 624 ntAPPRIS P1 TSL 2 BASIC17.37■□□□□ 0.37
Capns1O88456 Kcnk15-201ENSMUST00000044798 1199 ntAPPRIS P2 TSL 1 (best) BASIC17.37■□□□□ 0.37
Capns1O88456 Ttc19-201ENSMUST00000050646 3410 ntAPPRIS P3 TSL 1 (best) BASIC17.37■□□□□ 0.37
Capns1O88456 Hoxa10-202ENSMUST00000125581 2565 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
Capns1O88456 Nudt11-201ENSMUST00000103007 3036 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Capns1O88456 Irx3-201ENSMUST00000093312 2610 ntAPPRIS P4 TSL 1 (best) BASIC17.37■□□□□ 0.37
Capns1O88456 Ppp1r3f-201ENSMUST00000115742 3066 ntAPPRIS P3 TSL 1 (best) BASIC17.37■□□□□ 0.37
Capns1O88456 Gxylt1-201ENSMUST00000049484 6611 ntAPPRIS P3 TSL 1 (best) BASIC17.37■□□□□ 0.37
Capns1O88456 Rap1b-201ENSMUST00000064667 2724 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Capns1O88456 Ankrd9-207ENSMUST00000148765 1431 ntAPPRIS P2 TSL 2 BASIC17.37■□□□□ 0.37
Capns1O88456 Btnl9-202ENSMUST00000066531 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC17.37■□□□□ 0.37
Capns1O88456 Gorasp2-202ENSMUST00000112201 2417 ntAPPRIS ALT2 TSL 1 (best) BASIC17.37■□□□□ 0.37
Capns1O88456 Tmem121b-201ENSMUST00000178687 4869 ntAPPRIS P1 BASIC17.37■□□□□ 0.37
Capns1O88456 Mfsd4a-202ENSMUST00000112365 1536 ntAPPRIS ALT2 TSL 5 BASIC17.37■□□□□ 0.37
Capns1O88456 A030001D20Rik-201ENSMUST00000211533 1542 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
Capns1O88456 Gnb5-206ENSMUST00000215875 2105 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Capns1O88456 Zfp710-204ENSMUST00000206039 2194 ntAPPRIS ALT2 TSL 1 (best) BASIC17.36■□□□□ 0.37
Capns1O88456 Mark2-203ENSMUST00000051711 2867 ntAPPRIS P4 TSL 1 (best) BASIC17.36■□□□□ 0.37
Capns1O88456 Nr0b1-201ENSMUST00000026036 1808 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Capns1O88456 Foxp1-230ENSMUST00000177437 2468 ntAPPRIS P2 TSL 1 (best) BASIC17.36■□□□□ 0.37
Capns1O88456 Gm13830-204ENSMUST00000149609 1851 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
Capns1O88456 Mpp6-201ENSMUST00000036225 1896 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
Capns1O88456 Ppp1r18os-201ENSMUST00000145804 784 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
Capns1O88456 Rps2-208ENSMUST00000170715 998 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Capns1O88456 AB124611-203ENSMUST00000173769 1188 ntAPPRIS P3 TSL 1 (best) BASIC17.36■□□□□ 0.37
Capns1O88456 Kiss1-204ENSMUST00000194044 583 ntAPPRIS P1 TSL 2 BASIC17.36■□□□□ 0.37
Capns1O88456 Kiss1-205ENSMUST00000195286 656 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Capns1O88456 Fst-201ENSMUST00000022287 2556 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Capns1O88456 Cckbr-201ENSMUST00000033189 2573 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Capns1O88456 Yipf2-203ENSMUST00000180365 2014 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Capns1O88456 Foxa2-201ENSMUST00000047315 2128 ntAPPRIS P3 TSL 1 (best) BASIC17.36■□□□□ 0.37
Capns1O88456 Ubald2-201ENSMUST00000057676 1482 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Capns1O88456 Itgb5-201ENSMUST00000069345 3056 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
Capns1O88456 Lrrfip1-201ENSMUST00000068116 2050 ntAPPRIS ALT2 TSL 5 BASIC17.35■□□□□ 0.37
Capns1O88456 Bhlhe22-201ENSMUST00000026120 3344 ntAPPRIS P1 BASIC17.35■□□□□ 0.37
Capns1O88456 Ssx2ip-204ENSMUST00000106153 3446 ntAPPRIS P3 TSL 1 (best) BASIC17.35■□□□□ 0.37
Capns1O88456 Gm13790-201ENSMUST00000156209 473 ntTSL 3 BASIC17.35■□□□□ 0.37
Capns1O88456 Gm37564-201ENSMUST00000195000 330 ntTSL 5 BASIC17.35■□□□□ 0.37
Capns1O88456 Twist2-201ENSMUST00000007949 1329 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Capns1O88456 Arhgap23-203ENSMUST00000121799 5816 ntAPPRIS P1 TSL 5 BASIC17.35■□□□□ 0.37
Capns1O88456 Ankrd9-204ENSMUST00000140788 1451 ntAPPRIS P2 TSL 3 BASIC17.35■□□□□ 0.37
Capns1O88456 Rcor3-203ENSMUST00000192128 1578 ntAPPRIS P3 TSL 1 (best) BASIC17.35■□□□□ 0.37
Capns1O88456 Tomm40-201ENSMUST00000032555 1646 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Capns1O88456 Rnf44-208ENSMUST00000128257 1689 ntTSL 5 BASIC17.35■□□□□ 0.37
Capns1O88456 A430057M04Rik-202ENSMUST00000170150 2176 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
Capns1O88456 Dap3-201ENSMUST00000090938 4760 ntAPPRIS P2 TSL 1 (best) BASIC17.34■□□□□ 0.37
Retrieved 100 of 76,532 protein–RNA pairs in 18.6 ms