Protein–RNA interactions for Protein: O70400

Pdlim1, PDZ and LIM domain protein 1, mousemouse

Predictions only

Length 327 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pdlim1O70400 Cobll1-202ENSMUST00000102726 5031 ntAPPRIS P3 TSL 1 (best) BASIC18.66■□□□□ 0.58
Pdlim1O70400 Cobll1-203ENSMUST00000112429 5045 ntAPPRIS ALT2 TSL 5 BASIC18.66■□□□□ 0.58
Pdlim1O70400 Stx4a-201ENSMUST00000033075 1456 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Pdlim1O70400 Ube4b-202ENSMUST00000103212 5626 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Pdlim1O70400 Ift57-201ENSMUST00000046777 2601 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Pdlim1O70400 Aadat-201ENSMUST00000079472 1972 ntAPPRIS P2 TSL 1 (best) BASIC18.65■□□□□ 0.58
Pdlim1O70400 Rian-206ENSMUST00000182119 329 ntTSL 3 BASIC18.65■□□□□ 0.58
Pdlim1O70400 Specc1-215ENSMUST00000202744 674 ntTSL 3 BASIC18.65■□□□□ 0.58
Pdlim1O70400 D830036C21Rik-201ENSMUST00000207444 453 ntTSL 3 BASIC18.65■□□□□ 0.58
Pdlim1O70400 Lhx2-203ENSMUST00000143783 1696 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
Pdlim1O70400 Donson-202ENSMUST00000114031 2147 ntAPPRIS ALT2 TSL 5 BASIC18.65■□□□□ 0.58
Pdlim1O70400 R3hdm4-201ENSMUST00000045628 1898 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Pdlim1O70400 Dao-201ENSMUST00000086599 1525 ntTSL 1 (best) BASIC18.64■□□□□ 0.58
Pdlim1O70400 Znrf1-204ENSMUST00000171182 5466 ntTSL 3 BASIC18.64■□□□□ 0.58
Pdlim1O70400 Mgat4b-201ENSMUST00000041725 2429 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.58
Pdlim1O70400 Sec24b-201ENSMUST00000001079 5128 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.58
Pdlim1O70400 Hoxd13-201ENSMUST00000001872 2483 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.58
Pdlim1O70400 E4f1-205ENSMUST00000226941 2642 ntAPPRIS ALT2 BASIC18.64■□□□□ 0.57
Pdlim1O70400 Irx3-201ENSMUST00000093312 2610 ntAPPRIS P4 TSL 1 (best) BASIC18.64■□□□□ 0.57
Pdlim1O70400 Sae1-204ENSMUST00000211741 1663 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
Pdlim1O70400 Tmem54-203ENSMUST00000106064 1066 ntAPPRIS P3 TSL 1 (best) BASIC18.64■□□□□ 0.57
Pdlim1O70400 Psenen-201ENSMUST00000043898 708 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Pdlim1O70400 Gm18688-201ENSMUST00000204695 1859 ntBASIC18.64■□□□□ 0.57
Pdlim1O70400 Pcyt2-203ENSMUST00000106188 1486 ntAPPRIS ALT2 TSL 1 (best) BASIC18.64■□□□□ 0.57
Pdlim1O70400 Kl-201ENSMUST00000078856 5118 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Pdlim1O70400 Khk-204ENSMUST00000201621 1583 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Pdlim1O70400 Gas2l1-203ENSMUST00000109895 2530 ntAPPRIS P3 TSL 1 (best) BASIC18.63■□□□□ 0.57
Pdlim1O70400 Gatad1-201ENSMUST00000007559 2545 ntAPPRIS P2 TSL 1 (best) BASIC18.63■□□□□ 0.57
Pdlim1O70400 Ppm1m-203ENSMUST00000140761 1846 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Pdlim1O70400 Dstn-201ENSMUST00000103172 1911 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Pdlim1O70400 Gm27405-201ENSMUST00000184201 112 ntBASIC18.63■□□□□ 0.57
Pdlim1O70400 Gm44238-201ENSMUST00000203300 353 ntTSL 3 BASIC18.63■□□□□ 0.57
Pdlim1O70400 AC133650.2-201ENSMUST00000217036 607 ntTSL 3 BASIC18.63■□□□□ 0.57
Pdlim1O70400 Ndufa5-201ENSMUST00000023851 875 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Pdlim1O70400 2200002D01Rik-201ENSMUST00000032808 1466 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Pdlim1O70400 Nrm-201ENSMUST00000074259 1466 ntAPPRIS P2 TSL 1 (best) BASIC18.63■□□□□ 0.57
Pdlim1O70400 Srp68-201ENSMUST00000021133 2526 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Pdlim1O70400 Tmem11-203ENSMUST00000168218 1511 ntTSL 2 BASIC18.63■□□□□ 0.57
Pdlim1O70400 Cdo1-201ENSMUST00000035804 1530 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Pdlim1O70400 Gnas-208ENSMUST00000109087 1716 ntAPPRIS P4 TSL 1 (best) BASIC18.63■□□□□ 0.57
Pdlim1O70400 Amdhd1-201ENSMUST00000016034 2421 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Pdlim1O70400 Adpgk-201ENSMUST00000026266 2464 ntAPPRIS ALT1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Pdlim1O70400 Ypel1-202ENSMUST00000090199 631 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
Pdlim1O70400 Fbxo44-201ENSMUST00000057907 1829 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Pdlim1O70400 Slc39a5-202ENSMUST00000167859 2025 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Pdlim1O70400 Myef2-209ENSMUST00000152367 2071 ntAPPRIS P4 TSL 1 (best) BASIC18.62■□□□□ 0.57
Pdlim1O70400 Sept7-202ENSMUST00000165594 2516 ntAPPRIS P2 TSL 5 BASIC18.62■□□□□ 0.57
Pdlim1O70400 Tcf7l1-201ENSMUST00000069536 3042 ntAPPRIS P3 TSL 1 (best) BASIC18.61■□□□□ 0.57
Pdlim1O70400 Gnpda1-201ENSMUST00000063814 2289 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Pdlim1O70400 Unc5b-201ENSMUST00000077925 5869 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Pdlim1O70400 Podxl-201ENSMUST00000026698 5379 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Pdlim1O70400 Arid3c-204ENSMUST00000171251 1751 ntAPPRIS P3 TSL 5 BASIC18.61■□□□□ 0.57
Pdlim1O70400 Trp73-204ENSMUST00000105644 5042 ntAPPRIS P3 TSL 1 (best) BASIC18.61■□□□□ 0.57
Pdlim1O70400 Nt5c3b-204ENSMUST00000107398 1635 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
Pdlim1O70400 Pno1-201ENSMUST00000020317 1544 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Pdlim1O70400 Sigmar1-202ENSMUST00000071561 1547 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
Pdlim1O70400 Rchy1-204ENSMUST00000169948 1417 ntTSL 3 BASIC18.61■□□□□ 0.57
Pdlim1O70400 Tssk2-201ENSMUST00000055374 1387 ntAPPRIS P1 BASIC18.61■□□□□ 0.57
Pdlim1O70400 Dpyd-204ENSMUST00000149101 531 ntTSL 3 BASIC18.61■□□□□ 0.57
Pdlim1O70400 Stx6-209ENSMUST00000195302 955 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
Pdlim1O70400 Zfp777-202ENSMUST00000114583 3111 ntAPPRIS P3 TSL 5 BASIC18.6■□□□□ 0.57
Pdlim1O70400 Galnt14-202ENSMUST00000112591 1843 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
Pdlim1O70400 Sstr1-202ENSMUST00000110671 1752 ntAPPRIS P1 TSL 2 BASIC18.6■□□□□ 0.57
Pdlim1O70400 Hoxc6-201ENSMUST00000001711 1581 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Pdlim1O70400 Gpr137-203ENSMUST00000099776 1569 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
Pdlim1O70400 Hmx2-202ENSMUST00000183219 1546 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Pdlim1O70400 1700065D16Rik-204ENSMUST00000189348 1540 ntTSL 2 BASIC18.6■□□□□ 0.57
Pdlim1O70400 Carm1-202ENSMUST00000115394 3320 ntAPPRIS ALT2 TSL 5 BASIC18.6■□□□□ 0.57
Pdlim1O70400 Kansl1-205ENSMUST00000106977 5510 ntAPPRIS P2 TSL 1 (best) BASIC18.6■□□□□ 0.57
Pdlim1O70400 Gm39115-201ENSMUST00000211350 699 ntAPPRIS P1 BASIC18.6■□□□□ 0.57
Pdlim1O70400 Dusp15-201ENSMUST00000037715 715 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
Pdlim1O70400 Dyrk1b-203ENSMUST00000172761 2018 ntAPPRIS ALT1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Pdlim1O70400 Tmem55b-205ENSMUST00000160835 2755 ntAPPRIS P3 TSL 1 (best) BASIC18.6■□□□□ 0.57
Pdlim1O70400 Ntn5-201ENSMUST00000107742 1574 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
Pdlim1O70400 Pqlc3-201ENSMUST00000054536 1928 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Pdlim1O70400 Nhlh1-201ENSMUST00000059794 2464 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Pdlim1O70400 Prcd-201ENSMUST00000106381 724 ntTSL 3 BASIC18.59■□□□□ 0.57
Pdlim1O70400 Stmn4-202ENSMUST00000118426 1281 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
Pdlim1O70400 Sds-201ENSMUST00000066540 1207 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Pdlim1O70400 Snx20-201ENSMUST00000034087 1699 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Pdlim1O70400 Sox12-202ENSMUST00000182625 4453 ntAPPRIS P1 BASIC18.59■□□□□ 0.57
Pdlim1O70400 Anks3-201ENSMUST00000023157 2483 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Pdlim1O70400 Tmbim1-201ENSMUST00000016309 2378 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Pdlim1O70400 Anapc16-204ENSMUST00000182898 1852 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
Pdlim1O70400 Tifa-201ENSMUST00000054483 2245 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
Pdlim1O70400 Smarcd3-208ENSMUST00000195943 1712 ntTSL 5 BASIC18.58■□□□□ 0.57
Pdlim1O70400 Smarcd3-201ENSMUST00000030791 1735 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
Pdlim1O70400 Wnt16-201ENSMUST00000031681 1663 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
Pdlim1O70400 Zfp467-201ENSMUST00000101443 599 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
Pdlim1O70400 Tgfbr3l-201ENSMUST00000110993 1075 ntAPPRIS P1 TSL 5 BASIC18.58■□□□□ 0.56
Pdlim1O70400 Gm7291-201ENSMUST00000199147 382 ntBASIC18.58■□□□□ 0.56
Pdlim1O70400 Gm44732-201ENSMUST00000208055 635 ntTSL 3 BASIC18.58■□□□□ 0.56
Pdlim1O70400 Sbspon-201ENSMUST00000040695 2748 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
Pdlim1O70400 Glrb-201ENSMUST00000029654 3029 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
Pdlim1O70400 Nudt3-201ENSMUST00000025050 2193 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
Pdlim1O70400 3830408C21Rik-206ENSMUST00000225489 1810 ntBASIC18.58■□□□□ 0.56
Pdlim1O70400 Dcbld1-201ENSMUST00000069004 3024 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
Pdlim1O70400 Gdf11-201ENSMUST00000026408 4062 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Pdlim1O70400 Lamp1-201ENSMUST00000033824 2229 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Pdlim1O70400 Sptssa-201ENSMUST00000056228 1346 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Retrieved 100 of 76,532 protein–RNA pairs in 18.3 ms