Protein–RNA interactions for Protein: O55055

Trdmt1, tRNA (cytosine(38)-C(5))-methyltransferase, mousemouse

Predictions only

Length 415 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trdmt1O55055 Bola3-207ENSMUST00000136501 2312 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
Trdmt1O55055 Gm12356-201ENSMUST00000122854 353 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
Trdmt1O55055 Tex30-204ENSMUST00000128190 1275 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
Trdmt1O55055 Dohh-206ENSMUST00000131968 672 ntAPPRIS P1 TSL 3 BASIC20.92■□□□□ 0.94
Trdmt1O55055 Gm11527-201ENSMUST00000153795 596 ntTSL 2 BASIC20.92■□□□□ 0.94
Trdmt1O55055 Grp-201ENSMUST00000025395 862 ntAPPRIS P2 TSL 1 (best) BASIC20.92■□□□□ 0.94
Trdmt1O55055 Hmga1-202ENSMUST00000117254 1328 ntAPPRIS P3 TSL 2 BASIC20.92■□□□□ 0.94
Trdmt1O55055 Adcy9-203ENSMUST00000120080 4974 ntAPPRIS ALT2 TSL 1 (best) BASIC20.92■□□□□ 0.94
Trdmt1O55055 Ptpre-202ENSMUST00000209256 2593 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
Trdmt1O55055 Arl5a-201ENSMUST00000036541 5239 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
Trdmt1O55055 Dstn-201ENSMUST00000103172 1911 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
Trdmt1O55055 Ndel1-203ENSMUST00000108672 1653 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
Trdmt1O55055 Slc35f3-201ENSMUST00000108759 2309 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
Trdmt1O55055 Spc25-202ENSMUST00000112320 1527 ntAPPRIS ALT2 TSL 1 (best) BASIC20.91■□□□□ 0.94
Trdmt1O55055 Mthfsl-201ENSMUST00000113110 801 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
Trdmt1O55055 Pigt-202ENSMUST00000117066 1712 ntAPPRIS ALT2 TSL 1 (best) BASIC20.91■□□□□ 0.94
Trdmt1O55055 Mthfs-203ENSMUST00000118870 705 ntTSL 3 BASIC20.91■□□□□ 0.94
Trdmt1O55055 Stard6-203ENSMUST00000168249 1167 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
Trdmt1O55055 Gm6576-201ENSMUST00000169678 883 ntBASIC20.91■□□□□ 0.94
Trdmt1O55055 K230010J24Rik-204ENSMUST00000187868 1810 ntAPPRIS P1 TSL 5 BASIC20.91■□□□□ 0.94
Trdmt1O55055 Lsr-205ENSMUST00000205961 2021 ntAPPRIS P3 TSL 1 (best) BASIC20.91■□□□□ 0.94
Trdmt1O55055 Arhgef33-211ENSMUST00000225658 473 ntBASIC20.91■□□□□ 0.94
Trdmt1O55055 AC158538.1-201ENSMUST00000225870 294 ntBASIC20.91■□□□□ 0.94
Trdmt1O55055 Slc35d3-201ENSMUST00000059805 2630 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
Trdmt1O55055 Mthfs-201ENSMUST00000085256 816 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
Trdmt1O55055 2700081O15Rik-202ENSMUST00000159348 4989 ntAPPRIS P1 TSL 5 BASIC20.91■□□□□ 0.94
Trdmt1O55055 Gm45640-201ENSMUST00000210665 1896 ntBASIC20.9■□□□□ 0.94
Trdmt1O55055 Gm26708-203ENSMUST00000208236 1624 ntTSL 5 BASIC20.9■□□□□ 0.94
Trdmt1O55055 Tsc22d1-214ENSMUST00000177207 1476 ntTSL 3 BASIC20.9■□□□□ 0.94
Trdmt1O55055 Gm45472-201ENSMUST00000211295 1426 ntTSL 5 BASIC20.9■□□□□ 0.94
Trdmt1O55055 Speg-203ENSMUST00000113588 1078 ntTSL 5 BASIC20.9■□□□□ 0.94
Trdmt1O55055 Gm2479-201ENSMUST00000173312 1053 ntTSL 3 BASIC20.9■□□□□ 0.94
Trdmt1O55055 Rsu1-209ENSMUST00000191959 720 ntTSL 3 BASIC20.9■□□□□ 0.94
Trdmt1O55055 Gm44899-201ENSMUST00000207451 391 ntTSL 3 BASIC20.9■□□□□ 0.94
Trdmt1O55055 Dbf4-207ENSMUST00000171808 2402 ntAPPRIS P3 TSL 1 (best) BASIC20.9■□□□□ 0.94
Trdmt1O55055 BC037034-205ENSMUST00000159649 2093 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
Trdmt1O55055 Cd82-201ENSMUST00000028644 1824 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
Trdmt1O55055 Gm16432-201ENSMUST00000094273 1663 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.94
Trdmt1O55055 Gm10167-201ENSMUST00000150411 1479 ntBASIC20.89■□□□□ 0.94
Trdmt1O55055 Crlf2-203ENSMUST00000200284 1405 ntAPPRIS ALT2 TSL 1 (best) BASIC20.89■□□□□ 0.94
Trdmt1O55055 Acot7-201ENSMUST00000030779 1425 ntAPPRIS ALT2 TSL 1 (best) BASIC20.89■□□□□ 0.94
Trdmt1O55055 Gm2399-201ENSMUST00000104944 225 ntBASIC20.89■□□□□ 0.93
Trdmt1O55055 Lhpp-202ENSMUST00000106170 999 ntTSL 1 (best) BASIC20.89■□□□□ 0.93
Trdmt1O55055 Sdr39u1-201ENSMUST00000111325 1255 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
Trdmt1O55055 Pigp-203ENSMUST00000113910 966 ntTSL 1 (best) BASIC20.89■□□□□ 0.93
Trdmt1O55055 Dmrta2os-202ENSMUST00000141893 691 ntTSL 3 BASIC20.89■□□□□ 0.93
Trdmt1O55055 Gm18666-201ENSMUST00000190039 958 ntBASIC20.89■□□□□ 0.93
Trdmt1O55055 Ccnd2-202ENSMUST00000201066 983 ntTSL 2 BASIC20.89■□□□□ 0.93
Trdmt1O55055 Gpc3-202ENSMUST00000114857 1880 ntTSL 1 (best) BASIC20.89■□□□□ 0.93
Trdmt1O55055 Fbxo44-201ENSMUST00000057907 1829 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
Trdmt1O55055 Etv4-202ENSMUST00000107176 2377 ntTSL 1 (best) BASIC20.89■□□□□ 0.93
Trdmt1O55055 Snrnp70-201ENSMUST00000074575 1735 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
Trdmt1O55055 Cers2-201ENSMUST00000015858 2216 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
Trdmt1O55055 Taf4-201ENSMUST00000041618 4416 ntAPPRIS P2 TSL 1 (best) BASIC20.89■□□□□ 0.93
Trdmt1O55055 Magi2-201ENSMUST00000088516 4843 ntAPPRIS P2 TSL 5 BASIC20.89■□□□□ 0.93
Trdmt1O55055 Daxx-202ENSMUST00000170075 2673 ntAPPRIS P2 TSL 1 (best) BASIC20.89■□□□□ 0.93
Trdmt1O55055 Rassf7-201ENSMUST00000046890 1525 ntAPPRIS P2 TSL 1 (best) BASIC20.88■□□□□ 0.93
Trdmt1O55055 Mettl25-201ENSMUST00000046638 2033 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
Trdmt1O55055 Dynll2-201ENSMUST00000020775 2476 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
Trdmt1O55055 Anks3-201ENSMUST00000023157 2483 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
Trdmt1O55055 Brd1-203ENSMUST00000109381 4886 ntTSL 5 BASIC20.88■□□□□ 0.93
Trdmt1O55055 Selenoo-201ENSMUST00000082439 2383 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
Trdmt1O55055 Naxd-201ENSMUST00000033901 1359 ntTSL 2 BASIC20.88■□□□□ 0.93
Trdmt1O55055 Crtc2-201ENSMUST00000029545 2747 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
Trdmt1O55055 Iglon5-201ENSMUST00000107974 2622 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
Trdmt1O55055 Pigp-202ENSMUST00000113906 745 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
Trdmt1O55055 Unc50-203ENSMUST00000118059 1179 ntAPPRIS P1 TSL 5 BASIC20.88■□□□□ 0.93
Trdmt1O55055 Sdf4-204ENSMUST00000105579 1670 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
Trdmt1O55055 Gm43006-201ENSMUST00000197702 1602 ntBASIC20.88■□□□□ 0.93
Trdmt1O55055 Magi2-205ENSMUST00000197354 4785 ntAPPRIS ALT2 TSL 5 BASIC20.88■□□□□ 0.93
Trdmt1O55055 Marc2-201ENSMUST00000068725 1917 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
Trdmt1O55055 Nsfl1c-203ENSMUST00000103160 1369 ntTSL 5 BASIC20.87■□□□□ 0.93
Trdmt1O55055 Lrg1-201ENSMUST00000041357 1351 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
Trdmt1O55055 Mpz-201ENSMUST00000070758 2002 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
Trdmt1O55055 Stau2-217ENSMUST00000162751 3030 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
Trdmt1O55055 Gm1673-203ENSMUST00000114383 511 ntAPPRIS ALT2 TSL 1 (best) BASIC20.87■□□□□ 0.93
Trdmt1O55055 Tpgs1-201ENSMUST00000020552 1143 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
Trdmt1O55055 Josd2-218ENSMUST00000206887 693 ntTSL 5 BASIC20.87■□□□□ 0.93
Trdmt1O55055 Nrn1l-201ENSMUST00000060167 617 ntAPPRIS P3 TSL 1 (best) BASIC20.87■□□□□ 0.93
Trdmt1O55055 Prrg2-201ENSMUST00000007981 1295 ntAPPRIS P2 TSL 1 (best) BASIC20.87■□□□□ 0.93
Trdmt1O55055 Gal3st3-201ENSMUST00000061169 2421 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
Trdmt1O55055 Stx18-201ENSMUST00000031008 1471 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
Trdmt1O55055 Arpc5-202ENSMUST00000097536 1737 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
Trdmt1O55055 Rab5c-201ENSMUST00000019317 1967 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
Trdmt1O55055 Commd7-202ENSMUST00000109782 1343 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
Trdmt1O55055 Chsy1-201ENSMUST00000036372 4176 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
Trdmt1O55055 Gm13647-201ENSMUST00000154654 622 ntTSL 5 BASIC20.86■□□□□ 0.93
Trdmt1O55055 Gm10698-201ENSMUST00000182663 604 ntBASIC20.86■□□□□ 0.93
Trdmt1O55055 AC154649.1-201ENSMUST00000227392 384 ntBASIC20.86■□□□□ 0.93
Trdmt1O55055 D930007J09Rik-201ENSMUST00000057911 393 ntAPPRIS P1 BASIC20.86■□□□□ 0.93
Trdmt1O55055 Rad1-201ENSMUST00000022856 1514 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
Trdmt1O55055 Hccs-202ENSMUST00000112115 2473 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
Trdmt1O55055 Phospho1-201ENSMUST00000054173 1910 ntAPPRIS P1 TSL 2 BASIC20.86■□□□□ 0.93
Trdmt1O55055 Nrn1-203ENSMUST00000223611 1443 ntBASIC20.86■□□□□ 0.93
Trdmt1O55055 Csrp2-201ENSMUST00000020403 1384 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
Trdmt1O55055 Flot2-203ENSMUST00000100784 2699 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
Trdmt1O55055 Ccnjl-201ENSMUST00000050574 2672 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
Trdmt1O55055 Gfer-201ENSMUST00000046839 1775 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
Trdmt1O55055 Arid3c-202ENSMUST00000150809 1327 ntAPPRIS ALT2 TSL 1 (best) BASIC20.85■□□□□ 0.93
Trdmt1O55055 Uba5-201ENSMUST00000035166 2404 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
Retrieved 100 of 76,532 protein–RNA pairs in 21.6 ms