Protein–RNA interactions for Protein: O55038

Cxcl13, C-X-C motif chemokine 13, mousemouse

Predictions only

Length 109 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cxcl13O55038 Paip1-201ENSMUST00000026520 2551 ntAPPRIS P3 TSL 1 (best) BASIC16.03■□□□□ 0.16
Cxcl13O55038 Cd24a-201ENSMUST00000058714 1816 ntAPPRIS P2 TSL 1 (best) BASIC16.03■□□□□ 0.16
Cxcl13O55038 Arrb2-205ENSMUST00000108568 1777 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
Cxcl13O55038 Kcnip2-202ENSMUST00000079431 2302 ntAPPRIS ALT1 TSL 1 (best) BASIC16.02■□□□□ 0.16
Cxcl13O55038 Wdr20-205ENSMUST00000193053 1351 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
Cxcl13O55038 Chtop-207ENSMUST00000107346 1321 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
Cxcl13O55038 Map2k2-207ENSMUST00000143517 2405 ntAPPRIS P3 TSL 1 (best) BASIC16.02■□□□□ 0.16
Cxcl13O55038 Gal3st3-201ENSMUST00000061169 2421 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
Cxcl13O55038 2900042K21Rik-201ENSMUST00000194444 653 ntBASIC16.02■□□□□ 0.16
Cxcl13O55038 Gm44238-201ENSMUST00000203300 353 ntTSL 3 BASIC16.02■□□□□ 0.16
Cxcl13O55038 1810059H22Rik-205ENSMUST00000204570 690 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
Cxcl13O55038 1110004E09Rik-201ENSMUST00000023694 1143 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
Cxcl13O55038 Avp-201ENSMUST00000046001 577 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
Cxcl13O55038 Gm10065-201ENSMUST00000076238 345 ntAPPRIS P1 BASIC16.02■□□□□ 0.16
Cxcl13O55038 Snapc2-201ENSMUST00000011981 1536 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
Cxcl13O55038 Trim72-201ENSMUST00000081042 1755 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
Cxcl13O55038 Lemd3-201ENSMUST00000119093 4370 ntAPPRIS ALT2 TSL 2 BASIC16.02■□□□□ 0.15
Cxcl13O55038 Cav2-201ENSMUST00000000058 2733 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
Cxcl13O55038 E4f1-201ENSMUST00000056032 2574 ntAPPRIS P2 TSL 1 (best) BASIC16.01■□□□□ 0.15
Cxcl13O55038 Spint1-203ENSMUST00000110817 2323 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Cxcl13O55038 Dmrt1-201ENSMUST00000025755 2340 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Cxcl13O55038 Gm5540-201ENSMUST00000131852 1848 ntBASIC16.01■□□□□ 0.15
Cxcl13O55038 1810010K12Rik-201ENSMUST00000070378 1324 ntBASIC16.01■□□□□ 0.15
Cxcl13O55038 Nhlh1-201ENSMUST00000059794 2464 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Cxcl13O55038 Gm37563-201ENSMUST00000192580 1513 ntBASIC16.01■□□□□ 0.15
Cxcl13O55038 Aunip-201ENSMUST00000105866 1275 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Cxcl13O55038 5730522E02Rik-201ENSMUST00000109511 1162 ntAPPRIS P5 TSL 1 (best) BASIC16.01■□□□□ 0.15
Cxcl13O55038 2610035F20Rik-202ENSMUST00000177306 1149 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
Cxcl13O55038 Smn1-201ENSMUST00000022147 1222 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Cxcl13O55038 Tcf7-202ENSMUST00000109071 1742 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Cxcl13O55038 Picalm-215ENSMUST00000209068 3511 ntAPPRIS ALT2 TSL 5 BASIC16.01■□□□□ 0.15
Cxcl13O55038 Ccdc34-201ENSMUST00000028580 2070 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Cxcl13O55038 Lpar3-201ENSMUST00000039164 2464 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Cxcl13O55038 Chtop-202ENSMUST00000049937 2012 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Cxcl13O55038 Kirrel3-202ENSMUST00000115148 2851 ntAPPRIS P3 TSL 5 BASIC16.01■□□□□ 0.15
Cxcl13O55038 Stim2-201ENSMUST00000117661 4934 ntAPPRIS P2 TSL 1 (best) BASIC16■□□□□ 0.15
Cxcl13O55038 Siah1b-201ENSMUST00000037928 1783 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
Cxcl13O55038 Siah2-201ENSMUST00000070368 2511 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
Cxcl13O55038 Gpc3-202ENSMUST00000114857 1880 ntTSL 1 (best) BASIC16■□□□□ 0.15
Cxcl13O55038 Cracr2b-201ENSMUST00000053670 1698 ntAPPRIS P2 TSL 1 (best) BASIC16■□□□□ 0.15
Cxcl13O55038 Vkorc1-202ENSMUST00000119922 387 ntTSL 3 BASIC16■□□□□ 0.15
Cxcl13O55038 Gm10653-202ENSMUST00000139570 835 ntBASIC16■□□□□ 0.15
Cxcl13O55038 Gm26524-201ENSMUST00000192339 390 ntBASIC16■□□□□ 0.15
Cxcl13O55038 AC122769.4-201ENSMUST00000228166 901 ntBASIC16■□□□□ 0.15
Cxcl13O55038 Tmem54-201ENSMUST00000030575 1064 ntTSL 1 (best) BASIC16■□□□□ 0.15
Cxcl13O55038 Lbx2-201ENSMUST00000041265 817 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
Cxcl13O55038 Dnpep-204ENSMUST00000185797 2510 ntAPPRIS ALT2 TSL 1 (best) BASIC16■□□□□ 0.15
Cxcl13O55038 AC165249.1-201ENSMUST00000220031 1599 ntTSL 1 (best) BASIC16■□□□□ 0.15
Cxcl13O55038 Anapc16-201ENSMUST00000020307 1379 ntTSL 2 BASIC16■□□□□ 0.15
Cxcl13O55038 Gm13509-201ENSMUST00000119733 1308 ntBASIC15.99■□□□□ 0.15
Cxcl13O55038 Plin1-202ENSMUST00000178257 1841 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
Cxcl13O55038 Gm11627-202ENSMUST00000107081 818 ntAPPRIS P1 TSL 2 BASIC15.99■□□□□ 0.15
Cxcl13O55038 Grrp1-201ENSMUST00000060050 1226 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
Cxcl13O55038 Acot7-201ENSMUST00000030779 1425 ntAPPRIS ALT2 TSL 1 (best) BASIC15.99■□□□□ 0.15
Cxcl13O55038 Kcnq2-203ENSMUST00000081528 2382 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
Cxcl13O55038 Ntmt1-201ENSMUST00000041830 1387 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
Cxcl13O55038 Gm37352-201ENSMUST00000193908 2181 ntBASIC15.99■□□□□ 0.15
Cxcl13O55038 Slc35d3-201ENSMUST00000059805 2630 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
Cxcl13O55038 Nol7-201ENSMUST00000071926 1800 ntAPPRIS P2 TSL 1 (best) BASIC15.98■□□□□ 0.15
Cxcl13O55038 Tcp11-201ENSMUST00000042692 1984 ntAPPRIS P3 TSL 1 (best) BASIC15.98■□□□□ 0.15
Cxcl13O55038 Gdf1-201ENSMUST00000207684 1349 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
Cxcl13O55038 Henmt1-202ENSMUST00000098680 1466 ntAPPRIS ALT2 TSL 1 (best) BASIC15.98■□□□□ 0.15
Cxcl13O55038 Zmiz2-201ENSMUST00000012612 4199 ntAPPRIS P2 TSL 5 BASIC15.98■□□□□ 0.15
Cxcl13O55038 Gm12527-201ENSMUST00000117967 564 ntBASIC15.98■□□□□ 0.15
Cxcl13O55038 Josd2-204ENSMUST00000118628 864 ntAPPRIS P1 TSL 2 BASIC15.98■□□□□ 0.15
Cxcl13O55038 Nudt8-203ENSMUST00000122924 1082 ntTSL 2 BASIC15.98■□□□□ 0.15
Cxcl13O55038 Gm12473-201ENSMUST00000137535 579 ntTSL 5 BASIC15.98■□□□□ 0.15
Cxcl13O55038 Gm11713-201ENSMUST00000139941 523 ntTSL 3 BASIC15.98■□□□□ 0.15
Cxcl13O55038 Rab3c-203ENSMUST00000224180 967 ntBASIC15.98■□□□□ 0.15
Cxcl13O55038 Smad4-201ENSMUST00000025393 3384 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
Cxcl13O55038 Nat8-201ENSMUST00000032073 1123 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
Cxcl13O55038 Josd2-201ENSMUST00000035844 930 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
Cxcl13O55038 Rnf208-201ENSMUST00000060818 1137 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
Cxcl13O55038 Hist2h2aa2-201ENSMUST00000074976 528 ntAPPRIS P1 BASIC15.98■□□□□ 0.15
Cxcl13O55038 Hist2h2aa1-201ENSMUST00000078756 586 ntAPPRIS P1 BASIC15.98■□□□□ 0.15
Cxcl13O55038 Gab2-201ENSMUST00000004622 6168 ntAPPRIS P3 TSL 1 (best) BASIC15.98■□□□□ 0.15
Cxcl13O55038 Ppp1r16a-201ENSMUST00000037551 2692 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
Cxcl13O55038 Clasp2-211ENSMUST00000216817 2234 ntTSL 1 (best) BASIC15.98■□□□□ 0.15
Cxcl13O55038 Slc26a10-201ENSMUST00000095270 2215 ntAPPRIS P2 TSL 5 BASIC15.98■□□□□ 0.15
Cxcl13O55038 Rbmxl1-202ENSMUST00000211719 1622 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
Cxcl13O55038 Slc11a1-211ENSMUST00000187516 1893 ntAPPRIS ALT2 TSL 5 BASIC15.97■□□□□ 0.15
Cxcl13O55038 Arpc5-202ENSMUST00000097536 1737 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
Cxcl13O55038 Ube2i-213ENSMUST00000174031 824 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
Cxcl13O55038 Timp4-202ENSMUST00000205131 945 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
Cxcl13O55038 Gm44672-201ENSMUST00000206944 1098 ntBASIC15.97■□□□□ 0.15
Cxcl13O55038 Gng10-201ENSMUST00000041160 1192 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
Cxcl13O55038 Khdc3-201ENSMUST00000034737 1681 ntAPPRIS P3 TSL 1 (best) BASIC15.97■□□□□ 0.15
Cxcl13O55038 Sra1-201ENSMUST00000001415 2061 ntAPPRIS P4 TSL 5 BASIC15.97■□□□□ 0.15
Cxcl13O55038 Thra-201ENSMUST00000064187 2452 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
Cxcl13O55038 Cers1-203ENSMUST00000165819 2728 ntAPPRIS P4 TSL 1 (best) BASIC15.97■□□□□ 0.15
Cxcl13O55038 Rad1-201ENSMUST00000022856 1514 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
Cxcl13O55038 Foxj3-209ENSMUST00000162267 1391 ntAPPRIS ALT2 TSL 1 (best) BASIC15.97■□□□□ 0.15
Cxcl13O55038 2310022B05Rik-201ENSMUST00000034464 3307 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
Cxcl13O55038 Vav3-201ENSMUST00000046864 5019 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
Cxcl13O55038 Intu-201ENSMUST00000061590 1589 ntAPPRIS ALT2 TSL 2 BASIC15.96■□□□□ 0.15
Cxcl13O55038 Gm3164-201ENSMUST00000168866 1945 ntAPPRIS P1 TSL 5 BASIC15.96■□□□□ 0.15
Cxcl13O55038 Tradd-201ENSMUST00000034359 1689 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
Cxcl13O55038 Ndufb2-202ENSMUST00000119379 455 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
Cxcl13O55038 Gm15648-201ENSMUST00000149681 778 ntTSL 5 BASIC15.96■□□□□ 0.15
Cxcl13O55038 Gm19094-201ENSMUST00000209791 1246 ntBASIC15.96■□□□□ 0.15
Retrieved 100 of 76,532 protein–RNA pairs in 17.9 ms