Protein–RNA interactions for Protein: O54965

Rnf13, E3 ubiquitin-protein ligase RNF13, mousemouse

Predictions only

Length 381 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rnf13O54965 Gm35558-201ENSMUST00000222675 2219 ntBASIC17.11■□□□□ 0.33
Rnf13O54965 Tmem131-201ENSMUST00000027290 6546 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Rnf13O54965 Kcns1-201ENSMUST00000045196 2712 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Rnf13O54965 Kcnd3-202ENSMUST00000098761 7169 ntAPPRIS ALT1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Rnf13O54965 2310061I04Rik-203ENSMUST00000148482 1193 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
Rnf13O54965 Gm26558-201ENSMUST00000180559 861 ntAPPRIS P1 BASIC17.1■□□□□ 0.33
Rnf13O54965 Kcnma1-215ENSMUST00000190339 890 ntTSL 5 BASIC17.1■□□□□ 0.33
Rnf13O54965 6030419C18Rik-201ENSMUST00000085658 2139 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Rnf13O54965 Snx16-202ENSMUST00000099223 2512 ntAPPRIS ALT2 TSL 1 (best) BASIC17.1■□□□□ 0.33
Rnf13O54965 Pno1-201ENSMUST00000020317 1544 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Rnf13O54965 D16Ertd472e-202ENSMUST00000114219 1576 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Rnf13O54965 Nin-203ENSMUST00000095666 7183 ntAPPRIS ALT2 TSL 5 BASIC17.1■□□□□ 0.33
Rnf13O54965 Anks6-202ENSMUST00000107747 3980 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
Rnf13O54965 Nudt10-201ENSMUST00000103006 1775 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Rnf13O54965 Ppp1r13b-201ENSMUST00000054815 4389 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Rnf13O54965 Fem1c-201ENSMUST00000036226 5726 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Rnf13O54965 Plekhg3-207ENSMUST00000219063 4535 ntAPPRIS ALT2 TSL 5 BASIC17.09■□□□□ 0.33
Rnf13O54965 Ssx2ip-204ENSMUST00000106153 3446 ntAPPRIS P3 TSL 1 (best) BASIC17.09■□□□□ 0.33
Rnf13O54965 Arfrp1-209ENSMUST00000170190 2483 ntTSL 5 BASIC17.09■□□□□ 0.33
Rnf13O54965 Fgf11-201ENSMUST00000011285 2534 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
Rnf13O54965 Gm5953-201ENSMUST00000220644 2616 ntBASIC17.09■□□□□ 0.33
Rnf13O54965 Abr-202ENSMUST00000072740 5394 ntAPPRIS P1 TSL 5 BASIC17.09■□□□□ 0.33
Rnf13O54965 Serbp1-212ENSMUST00000204294 717 ntTSL 5 BASIC17.09■□□□□ 0.33
Rnf13O54965 Ptms-201ENSMUST00000032216 1149 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Rnf13O54965 Emc10-201ENSMUST00000118515 1662 ntAPPRIS ALT2 TSL 1 (best) BASIC17.09■□□□□ 0.33
Rnf13O54965 Oxct2a-201ENSMUST00000102640 1760 ntAPPRIS P1 BASIC17.09■□□□□ 0.33
Rnf13O54965 Coq9-201ENSMUST00000034234 1789 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Rnf13O54965 Shisa4-201ENSMUST00000041240 1763 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Rnf13O54965 Cyp4f16-201ENSMUST00000003416 2227 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Rnf13O54965 Fbxo30-201ENSMUST00000070300 2492 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Rnf13O54965 Gas2l1-203ENSMUST00000109895 2530 ntAPPRIS P3 TSL 1 (best) BASIC17.09■□□□□ 0.33
Rnf13O54965 Cyb5r4-201ENSMUST00000168529 2644 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Rnf13O54965 Galnt9-201ENSMUST00000040001 2883 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Rnf13O54965 Nkd1-201ENSMUST00000034086 3035 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
Rnf13O54965 Ciz1-205ENSMUST00000113338 2666 ntAPPRIS P3 TSL 5 BASIC17.08■□□□□ 0.33
Rnf13O54965 Miga1-201ENSMUST00000068243 2689 ntTSL 1 (best) BASIC17.08■□□□□ 0.33
Rnf13O54965 Schip1-206ENSMUST00000182719 2156 ntTSL 1 (best) BASIC17.08■□□□□ 0.33
Rnf13O54965 Neurl1b-201ENSMUST00000053020 6195 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
Rnf13O54965 Map4k4-202ENSMUST00000168431 5632 ntAPPRIS ALT2 TSL 5 BASIC17.08■□□□□ 0.33
Rnf13O54965 Dhx36-201ENSMUST00000029336 5620 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
Rnf13O54965 Matk-204ENSMUST00000120265 1618 ntAPPRIS ALT2 TSL 5 BASIC17.08■□□□□ 0.32
Rnf13O54965 Hnrnpab-203ENSMUST00000109103 1437 ntAPPRIS ALT2 TSL 1 (best) BASIC17.08■□□□□ 0.32
Rnf13O54965 Naxd-202ENSMUST00000177955 1307 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Rnf13O54965 Dctn3-203ENSMUST00000171641 885 ntTSL 3 BASIC17.08■□□□□ 0.32
Rnf13O54965 Alad-201ENSMUST00000030090 1206 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Rnf13O54965 Col4a3bp-202ENSMUST00000109444 5285 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
Rnf13O54965 Map6-206ENSMUST00000208605 2275 ntAPPRIS ALT2 TSL 1 (best) BASIC17.08■□□□□ 0.32
Rnf13O54965 Tada2b-201ENSMUST00000031097 3791 ntAPPRIS P1 TSL 2 BASIC17.08■□□□□ 0.32
Rnf13O54965 Lrrc58-201ENSMUST00000078717 8604 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Rnf13O54965 Pou2f2-205ENSMUST00000108417 1937 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
Rnf13O54965 Smad7-201ENSMUST00000026999 4278 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Rnf13O54965 Them6-201ENSMUST00000070923 1784 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Rnf13O54965 Srsf1-201ENSMUST00000079866 2948 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
Rnf13O54965 Negr1-202ENSMUST00000074015 4983 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Rnf13O54965 Nsmf-205ENSMUST00000114386 2685 ntTSL 5 BASIC17.07■□□□□ 0.32
Rnf13O54965 Pigw-201ENSMUST00000067058 2675 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Rnf13O54965 Gpc6-204ENSMUST00000125435 2423 ntAPPRIS ALT2 TSL 1 (best) BASIC17.07■□□□□ 0.32
Rnf13O54965 Nptxr-201ENSMUST00000023057 5004 ntAPPRIS ALT2 TSL 1 (best) BASIC17.07■□□□□ 0.32
Rnf13O54965 Cnot11-201ENSMUST00000003219 3162 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Rnf13O54965 Ikbip-202ENSMUST00000020150 1328 ntAPPRIS P3 TSL 1 (best) BASIC17.07■□□□□ 0.32
Rnf13O54965 Unc119-201ENSMUST00000002127 1329 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Rnf13O54965 Rps2-ps6-201ENSMUST00000095471 855 ntBASIC17.07■□□□□ 0.32
Rnf13O54965 A130051J06Rik-201ENSMUST00000180649 2618 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
Rnf13O54965 Zfpm1-201ENSMUST00000054052 3390 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Rnf13O54965 Azi2-207ENSMUST00000134433 2499 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
Rnf13O54965 Dtwd2-201ENSMUST00000025383 2476 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Rnf13O54965 Mfhas1-201ENSMUST00000037666 6408 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Rnf13O54965 Znrf1-205ENSMUST00000172856 4600 ntAPPRIS P1 TSL 5 BASIC17.06■□□□□ 0.32
Rnf13O54965 Rarb-207ENSMUST00000225921 2756 ntBASIC17.06■□□□□ 0.32
Rnf13O54965 Cacna1a-202ENSMUST00000122053 7589 ntAPPRIS ALT2 TSL 1 (best) BASIC17.06■□□□□ 0.32
Rnf13O54965 Ptges3-201ENSMUST00000052798 2000 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Rnf13O54965 Ncoa7-206ENSMUST00000215725 1445 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
Rnf13O54965 Gm11586-201ENSMUST00000123060 566 ntTSL 2 BASIC17.06■□□□□ 0.32
Rnf13O54965 Zfp963-202ENSMUST00000154063 640 ntTSL 3 BASIC17.06■□□□□ 0.32
Rnf13O54965 Siglec15-201ENSMUST00000170760 1156 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Rnf13O54965 AC161180.2-201ENSMUST00000222567 1015 ntAPPRIS P1 BASIC17.06■□□□□ 0.32
Rnf13O54965 B4galt4-205ENSMUST00000114712 2168 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Rnf13O54965 Lhfp-201ENSMUST00000059562 2108 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Rnf13O54965 Fcmr-201ENSMUST00000038829 1600 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Rnf13O54965 Grk6-206ENSMUST00000224995 2971 ntBASIC17.06■□□□□ 0.32
Rnf13O54965 Rer1-201ENSMUST00000030914 1596 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Rnf13O54965 Nr1h3-204ENSMUST00000111356 1955 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Rnf13O54965 Fbxo17-201ENSMUST00000032818 1958 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Rnf13O54965 Agfg1-206ENSMUST00000189220 8044 ntAPPRIS P2 TSL 1 (best) BASIC17.06■□□□□ 0.32
Rnf13O54965 Ube2d2a-201ENSMUST00000167406 2393 ntAPPRIS P1 TSL 5 BASIC17.06■□□□□ 0.32
Rnf13O54965 S1pr4-201ENSMUST00000053646 2386 ntAPPRIS P1 BASIC17.06■□□□□ 0.32
Rnf13O54965 Txnrd2-203ENSMUST00000115606 1905 ntAPPRIS P2 TSL 1 (best) BASIC17.06■□□□□ 0.32
Rnf13O54965 Kansl1l-201ENSMUST00000068168 4459 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Rnf13O54965 Slit3-201ENSMUST00000069837 5228 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Rnf13O54965 Mapre3-202ENSMUST00000200692 1816 ntTSL 5 BASIC17.05■□□□□ 0.32
Rnf13O54965 Gab1-202ENSMUST00000210676 4985 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
Rnf13O54965 Syncrip-205ENSMUST00000173801 2944 ntAPPRIS ALT1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Rnf13O54965 Pparg-202ENSMUST00000171644 2125 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Rnf13O54965 Cdc42ep5-201ENSMUST00000076831 1025 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Rnf13O54965 Nr2c2ap-201ENSMUST00000095273 1161 ntAPPRIS P2 TSL 1 (best) BASIC17.05■□□□□ 0.32
Rnf13O54965 Gm10209-201ENSMUST00000203397 1607 ntBASIC17.05■□□□□ 0.32
Rnf13O54965 March11-202ENSMUST00000140840 1558 ntAPPRIS P3 TSL 2 BASIC17.05■□□□□ 0.32
Rnf13O54965 Pycr2-201ENSMUST00000027802 1580 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Rnf13O54965 Mzt1-201ENSMUST00000042662 2240 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Rnf13O54965 Adrm1-201ENSMUST00000061437 1535 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Retrieved 100 of 76,532 protein–RNA pairs in 18.6 ms