Protein–RNA interactions for Protein: O35704

Sptlc1, Serine palmitoyltransferase 1, mousemouse

Predictions only

Length 473 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sptlc1O35704 Gm7075-201ENSMUST00000054760 425 ntAPPRIS P1 BASIC20.71■□□□□ 0.91
Sptlc1O35704 Gm16262-201ENSMUST00000162306 1751 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
Sptlc1O35704 Syt5-201ENSMUST00000065957 1750 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Sptlc1O35704 Stx3-202ENSMUST00000069285 2810 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Sptlc1O35704 Maff-202ENSMUST00000163691 1905 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.91
Sptlc1O35704 Polr3gl-201ENSMUST00000091924 1427 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Sptlc1O35704 Rchy1-201ENSMUST00000031345 1967 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Sptlc1O35704 Fbxw2-203ENSMUST00000113075 2260 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
Sptlc1O35704 Set-201ENSMUST00000067996 2834 ntAPPRIS ALT2 TSL 1 (best) BASIC20.7■□□□□ 0.9
Sptlc1O35704 Lgmn-202ENSMUST00000110020 1835 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Sptlc1O35704 a-202ENSMUST00000109697 705 ntAPPRIS P1 TSL 5 BASIC20.7■□□□□ 0.9
Sptlc1O35704 Alcam-206ENSMUST00000168071 878 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
Sptlc1O35704 Gm44965-201ENSMUST00000204121 360 ntAPPRIS P1 TSL 3 BASIC20.7■□□□□ 0.9
Sptlc1O35704 Kcmf1-206ENSMUST00000206378 544 ntTSL 5 BASIC20.7■□□□□ 0.9
Sptlc1O35704 Cmc1-201ENSMUST00000044220 1169 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Sptlc1O35704 Nhlh1-201ENSMUST00000059794 2464 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Sptlc1O35704 Flot2-203ENSMUST00000100784 2699 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
Sptlc1O35704 Aars-201ENSMUST00000034441 5750 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Sptlc1O35704 1110032F04Rik-201ENSMUST00000054551 2578 ntAPPRIS P1 BASIC20.69■□□□□ 0.9
Sptlc1O35704 Bola3-207ENSMUST00000136501 2312 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Sptlc1O35704 Rgs19-207ENSMUST00000108779 642 ntTSL 5 BASIC20.69■□□□□ 0.9
Sptlc1O35704 6430500D05Rik-201ENSMUST00000198286 1176 ntBASIC20.69■□□□□ 0.9
Sptlc1O35704 Gm44238-201ENSMUST00000203300 353 ntTSL 3 BASIC20.69■□□□□ 0.9
Sptlc1O35704 Tradd-201ENSMUST00000034359 1689 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Sptlc1O35704 Cltb-202ENSMUST00000091609 2186 ntAPPRIS P3 TSL 1 (best) BASIC20.69■□□□□ 0.9
Sptlc1O35704 9130221H12Rik-201ENSMUST00000169914 1465 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
Sptlc1O35704 Slc16a11-205ENSMUST00000126388 1938 ntAPPRIS P1 TSL 5 BASIC20.68■□□□□ 0.9
Sptlc1O35704 N4bp1-201ENSMUST00000034074 6469 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Sptlc1O35704 Gm27275-201ENSMUST00000184318 272 ntBASIC20.68■□□□□ 0.9
Sptlc1O35704 Ramp1-203ENSMUST00000188475 711 ntTSL 3 BASIC20.68■□□□□ 0.9
Sptlc1O35704 Cklf-203ENSMUST00000211809 525 ntAPPRIS ALT2 TSL 1 (best) BASIC20.68■□□□□ 0.9
Sptlc1O35704 Hspe1-201ENSMUST00000075242 774 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Sptlc1O35704 Hist2h2ac-201ENSMUST00000090782 520 ntAPPRIS P1 BASIC20.68■□□□□ 0.9
Sptlc1O35704 Intu-201ENSMUST00000061590 1589 ntAPPRIS ALT2 TSL 2 BASIC20.68■□□□□ 0.9
Sptlc1O35704 Pou2f2-210ENSMUST00000176408 1697 ntTSL 5 BASIC20.67■□□□□ 0.9
Sptlc1O35704 Cyp4f13-201ENSMUST00000075253 1752 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Sptlc1O35704 Ppm1m-203ENSMUST00000140761 1846 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Sptlc1O35704 Krt24-201ENSMUST00000017255 1847 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Sptlc1O35704 Rab7-206ENSMUST00000203674 424 ntTSL 5 BASIC20.67■□□□□ 0.9
Sptlc1O35704 Mvb12a-201ENSMUST00000034272 1062 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Sptlc1O35704 Gtf2h2-201ENSMUST00000066940 1065 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
Sptlc1O35704 Chpt1-202ENSMUST00000073783 852 ntAPPRIS ALT2 TSL 1 (best) BASIC20.67■□□□□ 0.9
Sptlc1O35704 Prr29-201ENSMUST00000009354 1112 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
Sptlc1O35704 Gdf1-201ENSMUST00000207684 1349 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Sptlc1O35704 Cox18-201ENSMUST00000048363 1333 ntAPPRIS P3 TSL 1 (best) BASIC20.67■□□□□ 0.9
Sptlc1O35704 AB124611-202ENSMUST00000086361 1310 ntAPPRIS ALT2 TSL 1 (best) BASIC20.67■□□□□ 0.9
Sptlc1O35704 Fgf2os-201ENSMUST00000153785 1441 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
Sptlc1O35704 Car11-201ENSMUST00000003360 1585 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Sptlc1O35704 Cd82-201ENSMUST00000028644 1824 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Sptlc1O35704 Gm45640-201ENSMUST00000210665 1896 ntBASIC20.67■□□□□ 0.9
Sptlc1O35704 Zbed3-201ENSMUST00000045909 1894 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Sptlc1O35704 Lsr-205ENSMUST00000205961 2021 ntAPPRIS P3 TSL 1 (best) BASIC20.66■□□□□ 0.9
Sptlc1O35704 Nup153-201ENSMUST00000021803 6109 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Sptlc1O35704 6030419C18Rik-201ENSMUST00000085658 2139 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Sptlc1O35704 Neo1-202ENSMUST00000214547 5414 ntAPPRIS ALT2 TSL 1 (best) BASIC20.66■□□□□ 0.9
Sptlc1O35704 Smad4-201ENSMUST00000025393 3384 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Sptlc1O35704 Npm3-ps1-201ENSMUST00000119728 528 ntBASIC20.66■□□□□ 0.9
Sptlc1O35704 Nnat-205ENSMUST00000153739 1146 ntAPPRIS ALT1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Sptlc1O35704 Nnat-206ENSMUST00000172487 404 ntTSL 5 BASIC20.66■□□□□ 0.9
Sptlc1O35704 Nnat-210ENSMUST00000173839 1135 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
Sptlc1O35704 Gm29458-201ENSMUST00000187093 354 ntTSL 3 BASIC20.66■□□□□ 0.9
Sptlc1O35704 Mrps10-201ENSMUST00000060752 1109 ntTSL 5 BASIC20.66■□□□□ 0.9
Sptlc1O35704 Npm3-201ENSMUST00000070215 888 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Sptlc1O35704 Kcne1l-201ENSMUST00000134825 1543 ntAPPRIS P1 BASIC20.66■□□□□ 0.9
Sptlc1O35704 Gm26708-203ENSMUST00000208236 1624 ntTSL 5 BASIC20.66■□□□□ 0.9
Sptlc1O35704 Porcn-202ENSMUST00000082320 1883 ntAPPRIS ALT1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Sptlc1O35704 Vgf-202ENSMUST00000186451 2277 ntAPPRIS P1 TSL 5 BASIC20.66■□□□□ 0.9
Sptlc1O35704 Ccng2-201ENSMUST00000031331 2810 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Sptlc1O35704 Agtpbp1-222ENSMUST00000171606 3037 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
Sptlc1O35704 Glrx5-201ENSMUST00000021522 2925 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Sptlc1O35704 Mtfr1l-201ENSMUST00000102550 2025 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Sptlc1O35704 Khdc3-201ENSMUST00000034737 1681 ntAPPRIS P3 TSL 1 (best) BASIC20.65■□□□□ 0.9
Sptlc1O35704 Cd37-209ENSMUST00000211373 1428 ntAPPRIS ALT2 TSL 1 (best) BASIC20.65■□□□□ 0.9
Sptlc1O35704 Pdlim5-202ENSMUST00000058626 873 ntTSL 5 BASIC20.65■□□□□ 0.9
Sptlc1O35704 Smn1-202ENSMUST00000091321 223 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
Sptlc1O35704 Phospho1-201ENSMUST00000054173 1910 ntAPPRIS P1 TSL 2 BASIC20.65■□□□□ 0.9
Sptlc1O35704 Fgfr2-217ENSMUST00000124096 2425 ntTSL 5 BASIC20.64■□□□□ 0.89
Sptlc1O35704 Pcmtd1-201ENSMUST00000061280 5232 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
Sptlc1O35704 Ppp1r8-202ENSMUST00000105919 1090 ntAPPRIS ALT1 TSL 3 BASIC20.64■□□□□ 0.89
Sptlc1O35704 Gm12896-201ENSMUST00000118430 226 ntBASIC20.64■□□□□ 0.89
Sptlc1O35704 Gm16141-201ENSMUST00000152073 790 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
Sptlc1O35704 Bnip1-201ENSMUST00000015725 1085 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
Sptlc1O35704 Hcn4-201ENSMUST00000034889 6118 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
Sptlc1O35704 Rell2-202ENSMUST00000091932 1995 ntTSL 2 BASIC20.64■□□□□ 0.89
Sptlc1O35704 Ppp1r14c-201ENSMUST00000043374 2617 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
Sptlc1O35704 Nrxn2-208ENSMUST00000137166 6314 ntAPPRIS ALT2 TSL 5 BASIC20.63■□□□□ 0.89
Sptlc1O35704 Vti1b-201ENSMUST00000055262 1490 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Sptlc1O35704 Slc35d3-201ENSMUST00000059805 2630 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Sptlc1O35704 Dnpep-204ENSMUST00000185797 2510 ntAPPRIS ALT2 TSL 1 (best) BASIC20.63■□□□□ 0.89
Sptlc1O35704 Rilpl2-201ENSMUST00000031347 1391 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Sptlc1O35704 Nol7-201ENSMUST00000071926 1800 ntAPPRIS P2 TSL 1 (best) BASIC20.63■□□□□ 0.89
Sptlc1O35704 Gm11713-201ENSMUST00000139941 523 ntTSL 3 BASIC20.63■□□□□ 0.89
Sptlc1O35704 Avp-201ENSMUST00000046001 577 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Sptlc1O35704 Sox15-201ENSMUST00000047373 861 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Sptlc1O35704 A230083G16Rik-201ENSMUST00000069553 991 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
Sptlc1O35704 Rpl38-202ENSMUST00000082092 345 ntAPPRIS P1 TSL 2 BASIC20.63■□□□□ 0.89
Sptlc1O35704 Pigt-202ENSMUST00000117066 1712 ntAPPRIS ALT2 TSL 1 (best) BASIC20.63■□□□□ 0.89
Sptlc1O35704 Kctd2-202ENSMUST00000106533 2649 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
Sptlc1O35704 Strn3-201ENSMUST00000013130 3046 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Sptlc1O35704 Ttc32-202ENSMUST00000219470 1645 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
Retrieved 100 of 76,532 protein–RNA pairs in 22 ms