Protein–RNA interactions for Protein: O35652

Lhx8, LIM/homeobox protein Lhx8, mousemouse

Predictions only

Length 367 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lhx8O35652 Clcc1-203ENSMUST00000106613 3064 ntAPPRIS ALT2 TSL 1 (best) BASIC18.22■□□□□ 0.51
Lhx8O35652 Arhgef1-204ENSMUST00000117796 3508 ntAPPRIS ALT2 TSL 1 (best) BASIC18.22■□□□□ 0.51
Lhx8O35652 Gm13830-204ENSMUST00000149609 1851 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
Lhx8O35652 Rncr4-201ENSMUST00000194541 2234 ntBASIC18.22■□□□□ 0.51
Lhx8O35652 Acvr1-201ENSMUST00000056376 2394 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Lhx8O35652 1700016H13Rik-203ENSMUST00000120108 797 ntAPPRIS P1 TSL 2 BASIC18.21■□□□□ 0.51
Lhx8O35652 Tcte2-209ENSMUST00000143162 1221 ntAPPRIS ALT2 TSL 1 (best) BASIC18.21■□□□□ 0.51
Lhx8O35652 Gm6569-201ENSMUST00000154520 811 ntAPPRIS P1 TSL 3 BASIC18.21■□□□□ 0.51
Lhx8O35652 Gm28041-201ENSMUST00000166080 779 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Lhx8O35652 C230062I16Rik-202ENSMUST00000207746 1022 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
Lhx8O35652 Gpx7-201ENSMUST00000030332 1289 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Lhx8O35652 Vamp5-201ENSMUST00000074231 553 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Lhx8O35652 Gm7628-201ENSMUST00000134690 2010 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
Lhx8O35652 Dio3-202ENSMUST00000173014 2030 ntAPPRIS P1 BASIC18.21■□□□□ 0.51
Lhx8O35652 Crlf2-203ENSMUST00000200284 1405 ntAPPRIS ALT2 TSL 1 (best) BASIC18.21■□□□□ 0.51
Lhx8O35652 Mplkip-201ENSMUST00000049744 2672 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Lhx8O35652 Gm38342-201ENSMUST00000195710 2980 ntBASIC18.21■□□□□ 0.5
Lhx8O35652 Chmp7-201ENSMUST00000036381 2649 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Lhx8O35652 Trmt11-201ENSMUST00000019927 2359 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Lhx8O35652 R3hdm4-201ENSMUST00000045628 1898 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Lhx8O35652 Srp68-201ENSMUST00000021133 2526 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Lhx8O35652 Eif3b-201ENSMUST00000100507 2945 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Lhx8O35652 Cenpb-201ENSMUST00000089510 4886 ntAPPRIS P1 BASIC18.2■□□□□ 0.5
Lhx8O35652 Trib3-201ENSMUST00000040312 2026 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Lhx8O35652 Btnl9-202ENSMUST00000066531 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC18.2■□□□□ 0.5
Lhx8O35652 Gm26871-201ENSMUST00000180593 700 ntTSL 3 BASIC18.2■□□□□ 0.5
Lhx8O35652 3110082J24Rik-202ENSMUST00000199573 767 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Lhx8O35652 Jkamp-201ENSMUST00000057257 1292 ntAPPRIS P3 TSL 1 (best) BASIC18.2■□□□□ 0.5
Lhx8O35652 Fam91a1-201ENSMUST00000037270 5560 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Lhx8O35652 Tm9sf3-201ENSMUST00000025989 6144 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Lhx8O35652 Cdk13-201ENSMUST00000042365 5202 ntAPPRIS P2 TSL 1 (best) BASIC18.2■□□□□ 0.5
Lhx8O35652 Enah-203ENSMUST00000111025 3385 ntAPPRIS ALT2 TSL 5 BASIC18.2■□□□□ 0.5
Lhx8O35652 Pxk-201ENSMUST00000036682 2812 ntAPPRIS ALT2 TSL 1 (best) BASIC18.2■□□□□ 0.5
Lhx8O35652 BC021767-201ENSMUST00000126387 1716 ntBASIC18.2■□□□□ 0.5
Lhx8O35652 Sox10-201ENSMUST00000040019 2713 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Lhx8O35652 Nipa2-202ENSMUST00000117812 3039 ntAPPRIS P1 TSL 2 BASIC18.2■□□□□ 0.5
Lhx8O35652 Ttc39a-203ENSMUST00000106619 1778 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
Lhx8O35652 Nbn-201ENSMUST00000029879 2533 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Lhx8O35652 Pitx3-201ENSMUST00000026259 1380 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Lhx8O35652 Vgll2-202ENSMUST00000163017 1650 ntAPPRIS P3 TSL 1 (best) BASIC18.19■□□□□ 0.5
Lhx8O35652 Ciapin1-201ENSMUST00000034233 1807 ntAPPRIS P1 TSL 5 BASIC18.19■□□□□ 0.5
Lhx8O35652 Zfp467-201ENSMUST00000101443 599 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
Lhx8O35652 Cacfd1-202ENSMUST00000114004 2194 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
Lhx8O35652 Pigt-202ENSMUST00000117066 1712 ntAPPRIS ALT2 TSL 1 (best) BASIC18.19■□□□□ 0.5
Lhx8O35652 Gm9828-202ENSMUST00000126622 1446 ntTSL 3 BASIC18.19■□□□□ 0.5
Lhx8O35652 Cnih2-201ENSMUST00000025805 1237 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Lhx8O35652 BC031181-201ENSMUST00000040284 1047 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Lhx8O35652 Vgll2-201ENSMUST00000058347 966 ntAPPRIS ALT2 TSL 1 (best) BASIC18.19■□□□□ 0.5
Lhx8O35652 Tmcc1-202ENSMUST00000088896 5838 ntAPPRIS P2 TSL 1 (best) BASIC18.19■□□□□ 0.5
Lhx8O35652 Nup153-201ENSMUST00000021803 6109 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Lhx8O35652 Gm32699-201ENSMUST00000221728 1988 ntBASIC18.19■□□□□ 0.5
Lhx8O35652 Clip1-205ENSMUST00000111566 6133 ntAPPRIS P3 TSL 1 (best) BASIC18.19■□□□□ 0.5
Lhx8O35652 Arhgap27-202ENSMUST00000092557 1504 ntTSL 2 BASIC18.18■□□□□ 0.5
Lhx8O35652 Metap1-201ENSMUST00000029804 2686 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Lhx8O35652 Spsb4-201ENSMUST00000055433 2720 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Lhx8O35652 Neil2-201ENSMUST00000038229 1932 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Lhx8O35652 Pknox1-203ENSMUST00000175806 2272 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Lhx8O35652 Spr-202ENSMUST00000174286 775 ntTSL 2 BASIC18.18■□□□□ 0.5
Lhx8O35652 Gm44731-201ENSMUST00000203086 542 ntTSL 3 BASIC18.18■□□□□ 0.5
Lhx8O35652 CT009738.1-201ENSMUST00000219031 809 ntBASIC18.18■□□□□ 0.5
Lhx8O35652 Gabarapl1-201ENSMUST00000032264 1820 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Lhx8O35652 Sh2b3-203ENSMUST00000118580 2393 ntAPPRIS ALT2 TSL 2 BASIC18.18■□□□□ 0.5
Lhx8O35652 Dhx15-205ENSMUST00000199321 2550 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
Lhx8O35652 Tmem102-201ENSMUST00000051025 1933 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Lhx8O35652 Crhr1-201ENSMUST00000093925 2460 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Lhx8O35652 Fiz1-204ENSMUST00000207030 2178 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Lhx8O35652 Rbm18-201ENSMUST00000028251 2617 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Lhx8O35652 Sco2-201ENSMUST00000167643 1143 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Lhx8O35652 1700003C15Rik-202ENSMUST00000188236 710 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
Lhx8O35652 Gm42778-201ENSMUST00000199644 553 ntBASIC18.17■□□□□ 0.5
Lhx8O35652 4930413G21Rik-201ENSMUST00000205998 993 ntBASIC18.17■□□□□ 0.5
Lhx8O35652 Gm45878-201ENSMUST00000211839 241 ntBASIC18.17■□□□□ 0.5
Lhx8O35652 Olfr1411-201ENSMUST00000073748 972 ntAPPRIS P1 BASIC18.17■□□□□ 0.5
Lhx8O35652 Gspt1-201ENSMUST00000080030 2898 ntAPPRIS P3 TSL 1 (best) BASIC18.17■□□□□ 0.5
Lhx8O35652 Phldb3-204ENSMUST00000206422 2564 ntAPPRIS P1 TSL 5 BASIC18.17■□□□□ 0.5
Lhx8O35652 Gm4779-203ENSMUST00000147742 1991 ntAPPRIS P1 TSL 5 BASIC18.17■□□□□ 0.5
Lhx8O35652 Tmem245-202ENSMUST00000107609 2643 ntAPPRIS P2 TSL 5 BASIC18.17■□□□□ 0.5
Lhx8O35652 Maf1-205ENSMUST00000160853 1651 ntAPPRIS P2 TSL 1 (best) BASIC18.16■□□□□ 0.5
Lhx8O35652 Mycl-202ENSMUST00000106252 3293 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Lhx8O35652 Derl2-207ENSMUST00000171041 1466 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
Lhx8O35652 Cyb5r4-201ENSMUST00000168529 2644 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Lhx8O35652 Fzd5-202ENSMUST00000116133 2895 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Lhx8O35652 Gm45121-201ENSMUST00000205396 1153 ntTSL 5 BASIC18.16■□□□□ 0.5
Lhx8O35652 Pts-208ENSMUST00000215416 439 ntTSL 2 BASIC18.16■□□□□ 0.5
Lhx8O35652 Gtsf1-201ENSMUST00000023129 819 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Lhx8O35652 4930412O13Rik-201ENSMUST00000026889 1187 ntAPPRIS P5 TSL 1 (best) BASIC18.16■□□□□ 0.5
Lhx8O35652 Kif27-203ENSMUST00000225388 5121 ntAPPRIS P1 BASIC18.16■□□□□ 0.5
Lhx8O35652 Ndfip2-206ENSMUST00000181969 2532 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Lhx8O35652 Anapc5-203ENSMUST00000196640 2422 ntAPPRIS ALT2 TSL 1 (best) BASIC18.15■□□□□ 0.5
Lhx8O35652 Fam105a-203ENSMUST00000226170 3043 ntBASIC18.15■□□□□ 0.5
Lhx8O35652 Sqstm1-202ENSMUST00000102774 2037 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Lhx8O35652 Smkr-ps-202ENSMUST00000141679 901 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
Lhx8O35652 Sumo3-209ENSMUST00000174113 512 ntAPPRIS P1 TSL 2 BASIC18.15■□□□□ 0.5
Lhx8O35652 Gm20760-201ENSMUST00000179197 648 ntBASIC18.15■□□□□ 0.5
Lhx8O35652 Gm32390-201ENSMUST00000212713 1172 ntBASIC18.15■□□□□ 0.5
Lhx8O35652 D130020L05Rik-202ENSMUST00000220889 769 ntTSL 3 BASIC18.15■□□□□ 0.5
Lhx8O35652 Zfp579-206ENSMUST00000162731 2489 ntAPPRIS P1 BASIC18.15■□□□□ 0.5
Lhx8O35652 Usp21-201ENSMUST00000065941 2219 ntAPPRIS P2 TSL 1 (best) BASIC18.15■□□□□ 0.5
Lhx8O35652 Smap1-201ENSMUST00000027339 2289 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Lhx8O35652 Pgf-204ENSMUST00000223220 2080 ntAPPRIS ALT2 TSL 1 (best) BASIC18.14■□□□□ 0.5
Retrieved 100 of 76,532 protein–RNA pairs in 16.9 ms