Protein–RNA interactions for Protein: O35491

Clk2, Dual specificity protein kinase CLK2, mousemouse

Predictions only

Length 499 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Clk2O35491 Dstn-201ENSMUST00000103172 1911 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Clk2O35491 Cbfb-201ENSMUST00000052209 2883 ntAPPRIS P3 TSL 1 (best) BASIC20.64■□□□□ 0.9
Clk2O35491 Macrod2-202ENSMUST00000078027 1669 ntAPPRIS P2 TSL 5 BASIC20.64■□□□□ 0.9
Clk2O35491 Rfk-201ENSMUST00000025617 2482 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.9
Clk2O35491 Gm11713-201ENSMUST00000139941 523 ntTSL 3 BASIC20.64■□□□□ 0.89
Clk2O35491 Spcs1-201ENSMUST00000186131 1005 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
Clk2O35491 Lbx2-201ENSMUST00000041265 817 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
Clk2O35491 Selenom-201ENSMUST00000094469 707 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
Clk2O35491 Gm3667-201ENSMUST00000171906 2053 ntAPPRIS P1 TSL 5 BASIC20.64■□□□□ 0.89
Clk2O35491 Cbfb-204ENSMUST00000109395 2709 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
Clk2O35491 Rin3-202ENSMUST00000101114 2394 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
Clk2O35491 Sirt1-203ENSMUST00000120239 4430 ntAPPRIS P3 TSL 5 BASIC20.63■□□□□ 0.89
Clk2O35491 Cnn3-201ENSMUST00000029773 2049 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Clk2O35491 Bmpr1b-202ENSMUST00000098568 1910 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Clk2O35491 Plekha1-211ENSMUST00000151119 2397 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
Clk2O35491 Tfam-203ENSMUST00000121685 899 ntAPPRIS ALT2 TSL 2 BASIC20.63■□□□□ 0.89
Clk2O35491 Tpsg1-204ENSMUST00000160920 867 ntTSL 3 BASIC20.63■□□□□ 0.89
Clk2O35491 Gm5408-201ENSMUST00000197998 747 ntBASIC20.63■□□□□ 0.89
Clk2O35491 Theg-202ENSMUST00000077433 1275 ntAPPRIS ALT2 TSL 1 (best) BASIC20.63■□□□□ 0.89
Clk2O35491 Ick-201ENSMUST00000009972 873 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
Clk2O35491 Mroh6-201ENSMUST00000184858 2216 ntAPPRIS P1 TSL 5 BASIC20.63■□□□□ 0.89
Clk2O35491 Bag5-201ENSMUST00000054636 2139 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Clk2O35491 Gas2l1-203ENSMUST00000109895 2530 ntAPPRIS P3 TSL 1 (best) BASIC20.63■□□□□ 0.89
Clk2O35491 Runx2-210ENSMUST00000162373 1565 ntAPPRIS ALT2 TSL 5 BASIC20.63■□□□□ 0.89
Clk2O35491 Gm37563-201ENSMUST00000192580 1513 ntBASIC20.63■□□□□ 0.89
Clk2O35491 Fbxo44-201ENSMUST00000057907 1829 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Clk2O35491 Rab43-203ENSMUST00000078647 4605 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Clk2O35491 Lhx8-201ENSMUST00000177846 2076 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
Clk2O35491 Fam53a-202ENSMUST00000065119 2009 ntAPPRIS P2 TSL 1 (best) BASIC20.62■□□□□ 0.89
Clk2O35491 Nat9-201ENSMUST00000103038 1143 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Clk2O35491 Ndufa12-204ENSMUST00000179990 566 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
Clk2O35491 Gm26524-201ENSMUST00000192339 390 ntBASIC20.62■□□□□ 0.89
Clk2O35491 Park7-201ENSMUST00000030805 908 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Clk2O35491 Sap30-201ENSMUST00000034022 1178 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Clk2O35491 Mras-201ENSMUST00000035045 4701 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Clk2O35491 Hoxa10-202ENSMUST00000125581 2565 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
Clk2O35491 Ajap1-201ENSMUST00000105646 3048 ntAPPRIS P1 TSL 5 BASIC20.62■□□□□ 0.89
Clk2O35491 Golph3-202ENSMUST00000226517 2359 ntBASIC20.61■□□□□ 0.89
Clk2O35491 Neto2-205ENSMUST00000216286 2932 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Clk2O35491 Fgf3-201ENSMUST00000105898 2299 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Clk2O35491 Grsf1-201ENSMUST00000078945 2538 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Clk2O35491 Ubtf-213ENSMUST00000178839 4580 ntAPPRIS ALT2 TSL 1 (best) BASIC20.61■□□□□ 0.89
Clk2O35491 Mtg1-201ENSMUST00000036977 1595 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Clk2O35491 Gm13441-201ENSMUST00000140104 1168 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
Clk2O35491 1700067K01Rik-203ENSMUST00000172548 986 ntAPPRIS P2 TSL 1 (best) BASIC20.61■□□□□ 0.89
Clk2O35491 Prmt1-205ENSMUST00000207659 945 ntTSL 5 BASIC20.61■□□□□ 0.89
Clk2O35491 AC124603.1-201ENSMUST00000223843 308 ntBASIC20.61■□□□□ 0.89
Clk2O35491 Prmt1-201ENSMUST00000045325 1071 ntTSL 5 BASIC20.61■□□□□ 0.89
Clk2O35491 Maz-203ENSMUST00000205568 2650 ntAPPRIS P1 TSL 5 BASIC20.61■□□□□ 0.89
Clk2O35491 Eid2b-201ENSMUST00000094651 1751 ntAPPRIS P1 BASIC20.61■□□□□ 0.89
Clk2O35491 Mgarp-202ENSMUST00000108046 1409 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
Clk2O35491 Slc39a5-201ENSMUST00000042666 1947 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Clk2O35491 Gpr137-203ENSMUST00000099776 1569 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
Clk2O35491 Chtop-207ENSMUST00000107346 1321 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
Clk2O35491 Thra-201ENSMUST00000064187 2452 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
Clk2O35491 2900042K21Rik-201ENSMUST00000194444 653 ntBASIC20.6■□□□□ 0.89
Clk2O35491 Gm19094-201ENSMUST00000209791 1246 ntBASIC20.6■□□□□ 0.89
Clk2O35491 AC112142.1-201ENSMUST00000228796 918 ntBASIC20.6■□□□□ 0.89
Clk2O35491 1700018M17Rik-201ENSMUST00000052502 456 ntBASIC20.6■□□□□ 0.89
Clk2O35491 Gnas-208ENSMUST00000109087 1716 ntAPPRIS P4 TSL 1 (best) BASIC20.6■□□□□ 0.89
Clk2O35491 Anapc16-204ENSMUST00000182898 1852 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Clk2O35491 Snapc2-201ENSMUST00000011981 1536 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Clk2O35491 AC122769.4-201ENSMUST00000228166 901 ntBASIC20.59■□□□□ 0.89
Clk2O35491 Slc35d2-201ENSMUST00000099441 2303 ntAPPRIS P2 TSL 1 (best) BASIC20.59■□□□□ 0.89
Clk2O35491 Mknk2-205ENSMUST00000200082 3439 ntAPPRIS P2 TSL 1 (best) BASIC20.59■□□□□ 0.89
Clk2O35491 Slc25a4-201ENSMUST00000034049 1925 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Clk2O35491 E4f1-205ENSMUST00000226941 2642 ntAPPRIS ALT2 BASIC20.58■□□□□ 0.89
Clk2O35491 Gm13509-201ENSMUST00000119733 1308 ntBASIC20.58■□□□□ 0.89
Clk2O35491 Gdf1-201ENSMUST00000207684 1349 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
Clk2O35491 Ndel1-201ENSMUST00000018880 2382 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
Clk2O35491 Uncx-201ENSMUST00000172997 2498 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
Clk2O35491 Gm12527-201ENSMUST00000117967 564 ntBASIC20.58■□□□□ 0.89
Clk2O35491 Vkorc1-202ENSMUST00000119922 387 ntTSL 3 BASIC20.58■□□□□ 0.89
Clk2O35491 Gm26837-201ENSMUST00000180821 2110 ntTSL 5 BASIC20.58■□□□□ 0.89
Clk2O35491 Rabac1-203ENSMUST00000205871 986 ntTSL 1 (best) BASIC20.58■□□□□ 0.89
Clk2O35491 Smn1-201ENSMUST00000022147 1222 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
Clk2O35491 Gm10065-201ENSMUST00000076238 345 ntAPPRIS P1 BASIC20.58■□□□□ 0.89
Clk2O35491 1700028I16Rik-201ENSMUST00000076984 1048 ntTSL 5 BASIC20.58■□□□□ 0.89
Clk2O35491 Hcn4-201ENSMUST00000034889 6118 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
Clk2O35491 Nags-201ENSMUST00000055409 2028 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
Clk2O35491 Foxj3-209ENSMUST00000162267 1391 ntAPPRIS ALT2 TSL 1 (best) BASIC20.58■□□□□ 0.88
Clk2O35491 Metrn-202ENSMUST00000165838 1363 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
Clk2O35491 Ppp3ca-201ENSMUST00000056758 2194 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
Clk2O35491 Gcgr-201ENSMUST00000026119 1957 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Clk2O35491 Eif1-201ENSMUST00000049385 1322 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Clk2O35491 Henmt1-202ENSMUST00000098680 1466 ntAPPRIS ALT2 TSL 1 (best) BASIC20.57■□□□□ 0.88
Clk2O35491 Nbl1-201ENSMUST00000042844 1793 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Clk2O35491 Magi3-201ENSMUST00000064371 6640 ntAPPRIS P3 TSL 1 (best) BASIC20.57■□□□□ 0.88
Clk2O35491 Magi2-202ENSMUST00000101558 6530 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
Clk2O35491 5730522E02Rik-201ENSMUST00000109511 1162 ntAPPRIS P5 TSL 1 (best) BASIC20.57■□□□□ 0.88
Clk2O35491 Gm12356-201ENSMUST00000122854 353 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
Clk2O35491 Fam98c-203ENSMUST00000134176 1189 ntTSL 2 BASIC20.57■□□□□ 0.88
Clk2O35491 Trabd-206ENSMUST00000169891 1422 ntAPPRIS ALT2 TSL 1 (best) BASIC20.57■□□□□ 0.88
Clk2O35491 Ube2i-213ENSMUST00000174031 824 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Clk2O35491 Olfr718-ps1-204ENSMUST00000218872 963 ntAPPRIS ALT2 BASIC20.57■□□□□ 0.88
Clk2O35491 Nat8-201ENSMUST00000032073 1123 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Clk2O35491 Dhx15-205ENSMUST00000199321 2550 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
Clk2O35491 Sept7-201ENSMUST00000115272 2533 ntAPPRIS ALT1 TSL 5 BASIC20.57■□□□□ 0.88
Clk2O35491 Man2c1os-201ENSMUST00000125333 1910 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
Clk2O35491 Rxrb-201ENSMUST00000044858 2623 ntAPPRIS P4 TSL 1 (best) BASIC20.57■□□□□ 0.88
Retrieved 100 of 76,532 protein–RNA pairs in 21.3 ms