Protein–RNA interactions for Protein: O09111

Ndufb11, NADH dehydrogenase [ubiquinone] 1 beta subcomplex subunit 11, mitochondrial, mousemouse

Predictions only

Length 151 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ndufb11O09111 Tle2-213ENSMUST00000146358 2749 ntAPPRIS P3 TSL 1 (best) BASIC15.2■□□□□ 0.02
Ndufb11O09111 Jmy-201ENSMUST00000065537 8776 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Ndufb11O09111 Prkar2a-201ENSMUST00000035220 4965 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Ndufb11O09111 Uba52-207ENSMUST00000140679 697 ntAPPRIS P1 TSL 2 BASIC15.2■□□□□ 0.02
Ndufb11O09111 Mboat1-201ENSMUST00000047311 2905 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Ndufb11O09111 Ctcf-201ENSMUST00000005841 3782 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Ndufb11O09111 Jdp2-201ENSMUST00000050687 1643 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Ndufb11O09111 Vsig10l-204ENSMUST00000203769 2473 ntAPPRIS P2 TSL 1 (best) BASIC15.2■□□□□ 0.02
Ndufb11O09111 BC051019-202ENSMUST00000106735 1957 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Ndufb11O09111 Cxcl14-202ENSMUST00000224801 1467 ntBASIC15.2■□□□□ 0.02
Ndufb11O09111 Tcf24-202ENSMUST00000185184 4193 ntAPPRIS P1 TSL 5 BASIC15.2■□□□□ 0.02
Ndufb11O09111 Hhat-203ENSMUST00000128619 1819 ntAPPRIS ALT2 TSL 1 (best) BASIC15.2■□□□□ 0.02
Ndufb11O09111 Tmem198-202ENSMUST00000113575 2185 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Ndufb11O09111 Pitpnm2-210ENSMUST00000162812 6952 ntAPPRIS P3 TSL 1 (best) BASIC15.19■□□□□ 0.02
Ndufb11O09111 Trim68-201ENSMUST00000082175 2388 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Ndufb11O09111 Tuba3b-201ENSMUST00000087445 1775 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Ndufb11O09111 Zcchc4-203ENSMUST00000113904 2485 ntAPPRIS ALT2 TSL 1 (best) BASIC15.19■□□□□ 0.02
Ndufb11O09111 Acot3-203ENSMUST00000223080 1545 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
Ndufb11O09111 Ovol2-201ENSMUST00000037423 1539 ntAPPRIS P4 TSL 1 (best) BASIC15.19■□□□□ 0.02
Ndufb11O09111 G730003C15Rik-202ENSMUST00000189096 2309 ntBASIC15.19■□□□□ 0.02
Ndufb11O09111 Abcd4-210ENSMUST00000223107 2410 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
Ndufb11O09111 Cpd-201ENSMUST00000021201 7946 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Ndufb11O09111 Gnao1-207ENSMUST00000138659 5526 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
Ndufb11O09111 Fiz1-208ENSMUST00000208944 2306 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Ndufb11O09111 Gm5828-201ENSMUST00000071842 1860 ntBASIC15.18■□□□□ 0.02
Ndufb11O09111 Btg3-201ENSMUST00000023570 1414 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Ndufb11O09111 Myrip-201ENSMUST00000048121 4906 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Ndufb11O09111 Gapvd1-203ENSMUST00000113099 5758 ntAPPRIS ALT2 TSL 5 BASIC15.18■□□□□ 0.02
Ndufb11O09111 Podxl2-202ENSMUST00000061262 2195 ntAPPRIS P3 TSL 1 (best) BASIC15.18■□□□□ 0.02
Ndufb11O09111 Zfp467-202ENSMUST00000114556 2287 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
Ndufb11O09111 Cntln-201ENSMUST00000047023 5528 ntAPPRIS ALT2 TSL 5 BASIC15.18■□□□□ 0.02
Ndufb11O09111 Snap91-202ENSMUST00000074468 4336 ntAPPRIS ALT2 TSL 5 BASIC15.18■□□□□ 0.02
Ndufb11O09111 Map3k1-201ENSMUST00000109267 6978 ntAPPRIS P1 TSL 2 BASIC15.18■□□□□ 0.02
Ndufb11O09111 Src-203ENSMUST00000109529 2020 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
Ndufb11O09111 Gm20503-201ENSMUST00000174664 1294 ntAPPRIS P1 TSL 5 BASIC15.18■□□□□ 0.02
Ndufb11O09111 6430500D05Rik-201ENSMUST00000198286 1176 ntBASIC15.18■□□□□ 0.02
Ndufb11O09111 Stx18-202ENSMUST00000042146 1473 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
Ndufb11O09111 Plpp1-201ENSMUST00000016144 1598 ntAPPRIS P4 TSL 1 (best) BASIC15.18■□□□□ 0.02
Ndufb11O09111 Etv6-201ENSMUST00000081028 5545 ntAPPRIS P1 TSL 2 BASIC15.18■□□□□ 0.02
Ndufb11O09111 Csnk1a1-207ENSMUST00000166990 1860 ntTSL 5 BASIC15.18■□□□□ 0.02
Ndufb11O09111 Eif4enif1-203ENSMUST00000110049 3614 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Ndufb11O09111 Cul4a-201ENSMUST00000016680 3728 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Ndufb11O09111 Tmbim1-201ENSMUST00000016309 2378 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Ndufb11O09111 Mex3a-201ENSMUST00000172699 5778 ntAPPRIS P1 TSL 2 BASIC15.18■□□□□ 0.02
Ndufb11O09111 Amacr-201ENSMUST00000070877 2577 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Ndufb11O09111 Card10-202ENSMUST00000164826 4726 ntAPPRIS P2 TSL 1 (best) BASIC15.18■□□□□ 0.02
Ndufb11O09111 Cdca7l-201ENSMUST00000021592 2957 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Ndufb11O09111 Ifrd2-201ENSMUST00000010192 2056 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Ndufb11O09111 Runx2-210ENSMUST00000162373 1565 ntAPPRIS ALT2 TSL 5 BASIC15.17■□□□□ 0.02
Ndufb11O09111 Hes1-201ENSMUST00000023171 1468 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Ndufb11O09111 Nploc4-201ENSMUST00000044271 4121 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Ndufb11O09111 Dtnbp1-201ENSMUST00000072329 1362 ntAPPRIS P2 TSL 1 (best) BASIC15.17■□□□□ 0.02
Ndufb11O09111 Dgcr6-207ENSMUST00000151266 1086 ntAPPRIS ALT1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Ndufb11O09111 Pkd1-207ENSMUST00000228550 1050 ntBASIC15.17■□□□□ 0.02
Ndufb11O09111 Gm15743-202ENSMUST00000182690 1901 ntBASIC15.17■□□□□ 0.02
Ndufb11O09111 Fcho2-208ENSMUST00000224992 2964 ntBASIC15.17■□□□□ 0.02
Ndufb11O09111 Sapcd2-203ENSMUST00000114293 1600 ntAPPRIS ALT2 TSL 1 (best) BASIC15.17■□□□□ 0.02
Ndufb11O09111 AC154231.1-201ENSMUST00000220564 2175 ntBASIC15.17■□□□□ 0.02
Ndufb11O09111 Scrib-201ENSMUST00000002603 5599 ntAPPRIS P3 TSL 1 (best) BASIC15.17■□□□□ 0.02
Ndufb11O09111 Atp8b2-201ENSMUST00000069805 5559 ntAPPRIS ALT2 TSL 5 BASIC15.17■□□□□ 0.02
Ndufb11O09111 Mpp6-201ENSMUST00000036225 1896 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
Ndufb11O09111 Ppm1b-202ENSMUST00000112304 3262 ntAPPRIS P3 TSL 1 (best) BASIC15.16■□□□□ 0.02
Ndufb11O09111 Exosc4-201ENSMUST00000059045 1796 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Ndufb11O09111 Gmpr-201ENSMUST00000000260 1580 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Ndufb11O09111 Mtss1l-201ENSMUST00000052457 4717 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Ndufb11O09111 Map4k5-210ENSMUST00000171211 4334 ntTSL 2 BASIC15.16■□□□□ 0.02
Ndufb11O09111 Crebzf-201ENSMUST00000061767 3376 ntAPPRIS P1 BASIC15.16■□□□□ 0.02
Ndufb11O09111 Msl1-204ENSMUST00000107487 2836 ntAPPRIS ALT2 TSL 2 BASIC15.16■□□□□ 0.02
Ndufb11O09111 Gadd45g-201ENSMUST00000021903 1071 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Ndufb11O09111 Dusp4-201ENSMUST00000033930 2740 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Ndufb11O09111 Pigl-201ENSMUST00000014389 2174 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Ndufb11O09111 Smim15-205ENSMUST00000225972 2097 ntAPPRIS P1 BASIC15.16■□□□□ 0.02
Ndufb11O09111 Ube3c-201ENSMUST00000049453 5048 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Ndufb11O09111 Vrk1-202ENSMUST00000072040 1509 ntAPPRIS ALT2 TSL 1 (best) BASIC15.16■□□□□ 0.02
Ndufb11O09111 Lrp5-202ENSMUST00000176867 2759 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
Ndufb11O09111 Tfdp2-202ENSMUST00000165120 2341 ntAPPRIS ALT2 TSL 1 (best) BASIC15.16■□□□□ 0.02
Ndufb11O09111 Fndc4-202ENSMUST00000172435 2333 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Ndufb11O09111 Hat1-202ENSMUST00000112122 1899 ntAPPRIS ALT2 TSL 5 BASIC15.16■□□□□ 0.02
Ndufb11O09111 Pacsin1-204ENSMUST00000114873 1857 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Ndufb11O09111 Crlf2-203ENSMUST00000200284 1405 ntAPPRIS ALT2 TSL 1 (best) BASIC15.16■□□□□ 0.02
Ndufb11O09111 Rsph6a-201ENSMUST00000035521 2354 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Ndufb11O09111 Dvl2-201ENSMUST00000019362 2968 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Ndufb11O09111 Pcgf3-202ENSMUST00000112597 2169 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
Ndufb11O09111 Uso1-204ENSMUST00000202155 3707 ntAPPRIS ALT2 TSL 1 (best) BASIC15.15■□□□□ 0.02
Ndufb11O09111 Edem1-201ENSMUST00000089162 5817 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Ndufb11O09111 Prdm6-203ENSMUST00000115399 2227 ntAPPRIS ALT2 TSL 1 (best) BASIC15.15■□□□□ 0.02
Ndufb11O09111 Trim3-203ENSMUST00000106791 2466 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
Ndufb11O09111 1110065P20Rik-201ENSMUST00000106190 968 ntAPPRIS P1 TSL 2 BASIC15.15■□□□□ 0.02
Ndufb11O09111 Gm11614-201ENSMUST00000137598 736 ntTSL 5 BASIC15.15■□□□□ 0.02
Ndufb11O09111 Gm29442-201ENSMUST00000188725 724 ntTSL 3 BASIC15.15■□□□□ 0.02
Ndufb11O09111 Lysmd4-209ENSMUST00000208998 2110 ntAPPRIS P2 TSL 1 (best) BASIC15.15■□□□□ 0.02
Ndufb11O09111 Gnb5-206ENSMUST00000215875 2105 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Ndufb11O09111 Tceal3-201ENSMUST00000060904 1116 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Ndufb11O09111 Sucla2-201ENSMUST00000022706 1545 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Ndufb11O09111 Gm37352-201ENSMUST00000193908 2181 ntBASIC15.15■□□□□ 0.02
Ndufb11O09111 2810459M11Rik-202ENSMUST00000165824 3331 ntAPPRIS P3 TSL 1 (best) BASIC15.15■□□□□ 0.02
Ndufb11O09111 Nsmf-202ENSMUST00000074422 2824 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
Ndufb11O09111 Srrm2-209ENSMUST00000190686 8864 ntAPPRIS P1 TSL 5 BASIC15.15■□□□□ 0.02
Ndufb11O09111 Gbx1-201ENSMUST00000088311 3475 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Ndufb11O09111 Dhx36-201ENSMUST00000029336 5620 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Retrieved 100 of 76,532 protein–RNA pairs in 16.6 ms