Protein–RNA interactions for Protein: O08848

Trove2, 60 kDa SS-A/Ro ribonucleoprotein, mousemouse

Predictions only

Length 538 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trove2O08848 Ttyh3-202ENSMUST00000197452 4576 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
Trove2O08848 Hnrnph3-202ENSMUST00000118898 2168 ntAPPRIS ALT1 TSL 5 BASIC19.32■□□□□ 0.68
Trove2O08848 Rragd-201ENSMUST00000029946 5055 ntTSL 5 BASIC19.31■□□□□ 0.68
Trove2O08848 AB041806-201ENSMUST00000062902 2105 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
Trove2O08848 Gm3667-201ENSMUST00000171906 2053 ntAPPRIS P1 TSL 5 BASIC19.31■□□□□ 0.68
Trove2O08848 Rnf44-208ENSMUST00000128257 1689 ntTSL 5 BASIC19.31■□□□□ 0.68
Trove2O08848 Gas1-201ENSMUST00000065086 2961 ntAPPRIS ALT2 BASIC19.31■□□□□ 0.68
Trove2O08848 Larp4b-201ENSMUST00000091829 5720 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
Trove2O08848 Acvr1-201ENSMUST00000056376 2394 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Trove2O08848 Gm5540-201ENSMUST00000131852 1848 ntBASIC19.31■□□□□ 0.68
Trove2O08848 Gm15202-201ENSMUST00000154188 393 ntTSL 3 BASIC19.31■□□□□ 0.68
Trove2O08848 Golgb1-201ENSMUST00000023534 498 ntBASIC19.31■□□□□ 0.68
Trove2O08848 Sox17-208ENSMUST00000195555 1977 ntTSL 5 BASIC19.31■□□□□ 0.68
Trove2O08848 Ppm1a-201ENSMUST00000021514 7668 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Trove2O08848 D830036C21Rik-202ENSMUST00000208263 1548 ntBASIC19.3■□□□□ 0.68
Trove2O08848 Grk2-202ENSMUST00000088737 3376 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Trove2O08848 Nin-203ENSMUST00000095666 7183 ntAPPRIS ALT2 TSL 5 BASIC19.3■□□□□ 0.68
Trove2O08848 Tub-201ENSMUST00000033341 5997 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Trove2O08848 Rgl2-201ENSMUST00000047503 3252 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Trove2O08848 Gm11747-201ENSMUST00000142751 1648 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
Trove2O08848 Ahcyl2-202ENSMUST00000102995 5155 ntAPPRIS ALT1 TSL 5 BASIC19.3■□□□□ 0.68
Trove2O08848 Rell2-212ENSMUST00000177058 1762 ntAPPRIS P1 TSL 5 BASIC19.3■□□□□ 0.68
Trove2O08848 Hoxb7-201ENSMUST00000049352 1291 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Trove2O08848 Csnk1a1-207ENSMUST00000166990 1860 ntTSL 5 BASIC19.3■□□□□ 0.68
Trove2O08848 Mall-201ENSMUST00000028856 2006 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Trove2O08848 Adam22-205ENSMUST00000115385 2318 ntTSL 2 BASIC19.3■□□□□ 0.68
Trove2O08848 Dlg1-205ENSMUST00000115201 3248 ntTSL 5 BASIC19.3■□□□□ 0.68
Trove2O08848 Zbtb7c-202ENSMUST00000167921 2147 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Trove2O08848 Zfp467-202ENSMUST00000114556 2287 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
Trove2O08848 Fgf11-201ENSMUST00000011285 2534 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
Trove2O08848 Ddx41-201ENSMUST00000021956 2205 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Trove2O08848 Pcdh7-201ENSMUST00000068110 5611 ntAPPRIS P3 TSL 1 (best) BASIC19.29■□□□□ 0.68
Trove2O08848 Rbm24-201ENSMUST00000037923 3086 ntAPPRIS P1 TSL 2 BASIC19.29■□□□□ 0.68
Trove2O08848 Yipf2-203ENSMUST00000180365 2014 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Trove2O08848 Tulp1-201ENSMUST00000041819 2017 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Trove2O08848 R3hdm4-201ENSMUST00000045628 1898 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Trove2O08848 Spata2l-202ENSMUST00000166768 2707 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Trove2O08848 Lrrc36-202ENSMUST00000109355 2411 ntAPPRIS P2 TSL 5 BASIC19.29■□□□□ 0.68
Trove2O08848 Fuz-214ENSMUST00000209132 853 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
Trove2O08848 Rnf187-202ENSMUST00000217262 711 ntAPPRIS P2 TSL 1 (best) BASIC19.29■□□□□ 0.68
Trove2O08848 Prkci-201ENSMUST00000108249 4708 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Trove2O08848 Lrrfip1-201ENSMUST00000068116 2050 ntAPPRIS ALT2 TSL 5 BASIC19.29■□□□□ 0.68
Trove2O08848 Gm5953-201ENSMUST00000220644 2616 ntBASIC19.29■□□□□ 0.68
Trove2O08848 Mark2-203ENSMUST00000051711 2867 ntAPPRIS P4 TSL 1 (best) BASIC19.29■□□□□ 0.68
Trove2O08848 Adgrv1-207ENSMUST00000128585 2580 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
Trove2O08848 Agap3-205ENSMUST00000199856 2685 ntTSL 5 BASIC19.28■□□□□ 0.68
Trove2O08848 Map3k1-201ENSMUST00000109267 6978 ntAPPRIS P1 TSL 2 BASIC19.28■□□□□ 0.68
Trove2O08848 Mcam-201ENSMUST00000034650 2989 ntAPPRIS P2 TSL 1 (best) BASIC19.28■□□□□ 0.68
Trove2O08848 0610010K14Rik-209ENSMUST00000108579 667 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
Trove2O08848 Bex1-202ENSMUST00000113118 754 ntAPPRIS P1 TSL 2 BASIC19.28■□□□□ 0.68
Trove2O08848 Bag1-201ENSMUST00000030125 1295 ntAPPRIS ALT2 TSL 1 (best) BASIC19.28■□□□□ 0.68
Trove2O08848 Sdsl-202ENSMUST00000052258 1225 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Trove2O08848 Zc3h14-202ENSMUST00000057000 3046 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
Trove2O08848 Kcns2-201ENSMUST00000072868 5456 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Trove2O08848 Pcnx-204ENSMUST00000221721 8318 ntAPPRIS ALT2 TSL 5 BASIC19.28■□□□□ 0.68
Trove2O08848 Gm26798-201ENSMUST00000181384 2837 ntTSL 5 BASIC19.28■□□□□ 0.68
Trove2O08848 Ankrd9-203ENSMUST00000135131 1563 ntAPPRIS P2 TSL 1 (best) BASIC19.27■□□□□ 0.68
Trove2O08848 Letm1-201ENSMUST00000005431 5272 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Trove2O08848 Rpap3-201ENSMUST00000023104 2260 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Trove2O08848 Trim44-201ENSMUST00000102573 5612 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Trove2O08848 Fbxo22-204ENSMUST00000146201 2009 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
Trove2O08848 Itgb5-202ENSMUST00000115028 3090 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Trove2O08848 Ncor1-203ENSMUST00000069456 3171 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
Trove2O08848 Mfsd4a-202ENSMUST00000112365 1536 ntAPPRIS ALT2 TSL 5 BASIC19.27■□□□□ 0.68
Trove2O08848 Scrib-201ENSMUST00000002603 5599 ntAPPRIS P3 TSL 1 (best) BASIC19.27■□□□□ 0.68
Trove2O08848 Kiss1-205ENSMUST00000195286 656 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Trove2O08848 Pawr-202ENSMUST00000218332 870 ntAPPRIS ALT2 TSL 1 (best) BASIC19.27■□□□□ 0.68
Trove2O08848 Gltpd2-201ENSMUST00000057685 1216 ntAPPRIS P2 TSL 1 (best) BASIC19.27■□□□□ 0.68
Trove2O08848 Tmem8-201ENSMUST00000025010 3464 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Trove2O08848 Atp6v0a2-201ENSMUST00000037865 5345 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Trove2O08848 Gabarapl1-201ENSMUST00000032264 1820 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Trove2O08848 Ebf3-204ENSMUST00000169486 4994 ntAPPRIS ALT1 TSL 5 BASIC19.27■□□□□ 0.67
Trove2O08848 Negr1-202ENSMUST00000074015 4983 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.67
Trove2O08848 Rncr4-201ENSMUST00000194541 2234 ntBASIC19.27■□□□□ 0.67
Trove2O08848 Lig3-204ENSMUST00000131537 1782 ntTSL 1 (best) BASIC19.27■□□□□ 0.67
Trove2O08848 Lig3-209ENSMUST00000173009 1785 ntTSL 1 (best) BASIC19.27■□□□□ 0.67
Trove2O08848 Kcnk1-202ENSMUST00000212831 1309 ntTSL 5 BASIC19.26■□□□□ 0.67
Trove2O08848 Wtap-205ENSMUST00000160781 2442 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
Trove2O08848 Pdp1-206ENSMUST00000108302 2525 ntTSL 3 BASIC19.26■□□□□ 0.67
Trove2O08848 Eif4g3-202ENSMUST00000084214 6139 ntAPPRIS P2 TSL 1 (best) BASIC19.26■□□□□ 0.67
Trove2O08848 Ssc4d-204ENSMUST00000111153 2745 ntAPPRIS P1 TSL 5 BASIC19.26■□□□□ 0.67
Trove2O08848 Dach1-202ENSMUST00000071533 5219 ntAPPRIS P4 TSL 1 (best) BASIC19.26■□□□□ 0.67
Trove2O08848 Igsf8-202ENSMUST00000085912 2182 ntAPPRIS P1 TSL 5 BASIC19.26■□□□□ 0.67
Trove2O08848 Btnl9-202ENSMUST00000066531 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC19.26■□□□□ 0.67
Trove2O08848 Svbp-201ENSMUST00000030395 733 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Trove2O08848 Gm18688-201ENSMUST00000204695 1859 ntBASIC19.26■□□□□ 0.67
Trove2O08848 Wipi2-202ENSMUST00000110778 1959 ntAPPRIS P1 TSL 5 BASIC19.26■□□□□ 0.67
Trove2O08848 Gm20100-201ENSMUST00000209418 2272 ntBASIC19.26■□□□□ 0.67
Trove2O08848 Gm26884-201ENSMUST00000181207 3074 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
Trove2O08848 Tomm40-201ENSMUST00000032555 1646 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Trove2O08848 Gpc6-204ENSMUST00000125435 2423 ntAPPRIS ALT2 TSL 1 (best) BASIC19.25■□□□□ 0.67
Trove2O08848 Fgfr3-202ENSMUST00000087820 2630 ntAPPRIS ALT2 TSL 5 BASIC19.25■□□□□ 0.67
Trove2O08848 Lifr-202ENSMUST00000164529 2844 ntAPPRIS ALT2 TSL 1 (best) BASIC19.25■□□□□ 0.67
Trove2O08848 Rasgrp1-201ENSMUST00000102534 5229 ntAPPRIS P1 TSL 5 BASIC19.25■□□□□ 0.67
Trove2O08848 Dtwd2-201ENSMUST00000025383 2476 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Trove2O08848 Blcap-202ENSMUST00000109528 2056 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Trove2O08848 Arhgdia-202ENSMUST00000106197 1867 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Trove2O08848 Rabgap1l-216ENSMUST00000195442 1877 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
Trove2O08848 Pde6d-203ENSMUST00000146220 879 ntTSL 2 BASIC19.25■□□□□ 0.67
Trove2O08848 Ankra2-205ENSMUST00000150916 1028 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
Retrieved 100 of 76,532 protein–RNA pairs in 21.8 ms