Protein–RNA interactions for Protein: O08811

Ercc2, General transcription and DNA repair factor IIH helicase subunit XPD, mousemouse

Known RBP Predictions only

Length 760 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ercc2O08811 E130218I03Rik-201ENSMUST00000122952 943 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Ercc2O08811 Emc9-201ENSMUST00000022828 855 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Ercc2O08811 Eid2b-201ENSMUST00000094651 1751 ntAPPRIS P1 BASIC19.36■□□□□ 0.69
Ercc2O08811 Cdk5r2-201ENSMUST00000160379 2799 ntAPPRIS P1 BASIC19.36■□□□□ 0.69
Ercc2O08811 Acot2-201ENSMUST00000021649 2196 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Ercc2O08811 Kcnc3-207ENSMUST00000209177 2960 ntAPPRIS ALT2 TSL 5 BASIC19.35■□□□□ 0.69
Ercc2O08811 Nhlh1-201ENSMUST00000059794 2464 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Ercc2O08811 Arpc5-202ENSMUST00000097536 1737 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
Ercc2O08811 Gm18284-201ENSMUST00000172604 624 ntBASIC19.35■□□□□ 0.69
Ercc2O08811 Cyyr1-204ENSMUST00000175700 1294 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
Ercc2O08811 Rasl10b-201ENSMUST00000021022 996 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Ercc2O08811 Lmtk3-204ENSMUST00000209617 5051 ntAPPRIS ALT2 TSL 1 (best) BASIC19.35■□□□□ 0.69
Ercc2O08811 Golga7-201ENSMUST00000051094 1792 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Ercc2O08811 Abhd8-201ENSMUST00000008094 1978 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Ercc2O08811 1810059C17Rik-201ENSMUST00000125173 487 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
Ercc2O08811 Neurl1b-203ENSMUST00000183077 1084 ntTSL 5 BASIC19.34■□□□□ 0.69
Ercc2O08811 Clcn4-206ENSMUST00000210594 2539 ntAPPRIS ALT2 TSL 5 BASIC19.34■□□□□ 0.69
Ercc2O08811 Impdh2-201ENSMUST00000081111 1858 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Ercc2O08811 Psmd3-201ENSMUST00000017365 2148 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Ercc2O08811 Vim-206ENSMUST00000193675 1777 ntAPPRIS ALT2 TSL 5 BASIC19.34■□□□□ 0.69
Ercc2O08811 Acot7-201ENSMUST00000030779 1425 ntAPPRIS ALT2 TSL 1 (best) BASIC19.34■□□□□ 0.69
Ercc2O08811 Sae1-204ENSMUST00000211741 1663 ntTSL 1 (best) BASIC19.33■□□□□ 0.69
Ercc2O08811 Anks3-201ENSMUST00000023157 2483 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
Ercc2O08811 Cacfd1-202ENSMUST00000114004 2194 ntTSL 1 (best) BASIC19.33■□□□□ 0.69
Ercc2O08811 1700008J07Rik-201ENSMUST00000185351 2432 ntBASIC19.33■□□□□ 0.69
Ercc2O08811 Mrpl3-205ENSMUST00000149243 2309 ntTSL 1 (best) BASIC19.33■□□□□ 0.69
Ercc2O08811 Sirpa-209ENSMUST00000160276 876 ntTSL 1 (best) BASIC19.33■□□□□ 0.68
Ercc2O08811 Nudt14-202ENSMUST00000221397 1241 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
Ercc2O08811 Mark2-206ENSMUST00000164205 3104 ntAPPRIS ALT2 TSL 1 (best) BASIC19.33■□□□□ 0.68
Ercc2O08811 Cd37-209ENSMUST00000211373 1428 ntAPPRIS ALT2 TSL 1 (best) BASIC19.33■□□□□ 0.68
Ercc2O08811 Unc50-201ENSMUST00000027285 1414 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
Ercc2O08811 Srp68-201ENSMUST00000021133 2526 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Ercc2O08811 Arl4c-203ENSMUST00000187810 2740 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Ercc2O08811 Ints6-201ENSMUST00000053959 4993 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Ercc2O08811 Sstr1-202ENSMUST00000110671 1752 ntAPPRIS P1 TSL 2 BASIC19.32■□□□□ 0.68
Ercc2O08811 Scn1b-203ENSMUST00000211945 1501 ntAPPRIS P1 TSL 5 BASIC19.32■□□□□ 0.68
Ercc2O08811 H2-Ab1-201ENSMUST00000040828 1211 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Ercc2O08811 Vkorc1l1-202ENSMUST00000073945 650 ntTSL 2 BASIC19.32■□□□□ 0.68
Ercc2O08811 D11Wsu47e-202ENSMUST00000106621 2062 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Ercc2O08811 Fcmr-201ENSMUST00000038829 1600 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Ercc2O08811 Nsmf-206ENSMUST00000114388 2781 ntAPPRIS ALT2 TSL 1 (best) BASIC19.32■□□□□ 0.68
Ercc2O08811 Ccdc85c-202ENSMUST00000222310 4298 ntAPPRIS P2 TSL 5 BASIC19.31■□□□□ 0.68
Ercc2O08811 Podxl-201ENSMUST00000026698 5379 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Ercc2O08811 Gga2-201ENSMUST00000033160 4915 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Ercc2O08811 Gm13067-201ENSMUST00000134236 404 ntTSL 5 BASIC19.31■□□□□ 0.68
Ercc2O08811 Gm42642-201ENSMUST00000200683 355 ntBASIC19.31■□□□□ 0.68
Ercc2O08811 Gpr3-201ENSMUST00000052090 1116 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Ercc2O08811 5031439G07Rik-201ENSMUST00000047144 6845 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Ercc2O08811 Cd83-201ENSMUST00000015540 2477 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Ercc2O08811 Sumf1-201ENSMUST00000032191 2593 ntAPPRIS P2 TSL 1 (best) BASIC19.31■□□□□ 0.68
Ercc2O08811 Pcgf3-202ENSMUST00000112597 2169 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
Ercc2O08811 Ccdc50-201ENSMUST00000039443 2192 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
Ercc2O08811 Mrpl12-201ENSMUST00000043627 1316 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Ercc2O08811 Pknox2-201ENSMUST00000039674 3632 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Ercc2O08811 Runx1-203ENSMUST00000168195 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC19.3■□□□□ 0.68
Ercc2O08811 Klc1-204ENSMUST00000122300 2268 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
Ercc2O08811 Exoc5-206ENSMUST00000161504 2582 ntTSL 5 BASIC19.3■□□□□ 0.68
Ercc2O08811 4930444P10Rik-203ENSMUST00000151004 1001 ntAPPRIS P2 TSL 3 BASIC19.3■□□□□ 0.68
Ercc2O08811 Uncx-202ENSMUST00000174792 1196 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
Ercc2O08811 Gm45121-201ENSMUST00000205396 1153 ntTSL 5 BASIC19.3■□□□□ 0.68
Ercc2O08811 C230062I16Rik-202ENSMUST00000207746 1022 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
Ercc2O08811 Gm10033-202ENSMUST00000211874 928 ntBASIC19.3■□□□□ 0.68
Ercc2O08811 Nfatc2-201ENSMUST00000029057 2310 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
Ercc2O08811 E2f1-202ENSMUST00000103145 2732 ntAPPRIS P3 TSL 1 (best) BASIC19.3■□□□□ 0.68
Ercc2O08811 Acvr1-201ENSMUST00000056376 2394 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Ercc2O08811 Ralgps2-205ENSMUST00000185198 2229 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
Ercc2O08811 Slc35d2-201ENSMUST00000099441 2303 ntAPPRIS P2 TSL 1 (best) BASIC19.29■□□□□ 0.68
Ercc2O08811 Nexmif-201ENSMUST00000056502 5211 ntAPPRIS ALT2 TSL 1 (best) BASIC19.29■□□□□ 0.68
Ercc2O08811 2510002D24Rik-202ENSMUST00000123146 361 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
Ercc2O08811 Wnt16-203ENSMUST00000148639 1168 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
Ercc2O08811 Dlx6-203ENSMUST00000171311 1071 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Ercc2O08811 AV026068-204ENSMUST00000186214 633 ntTSL 2 BASIC19.29■□□□□ 0.68
Ercc2O08811 Gm44238-201ENSMUST00000203300 353 ntTSL 3 BASIC19.29■□□□□ 0.68
Ercc2O08811 Tmem79-203ENSMUST00000107553 2053 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Ercc2O08811 Mdfi-201ENSMUST00000035375 1371 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Ercc2O08811 Anapc16-204ENSMUST00000182898 1852 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Ercc2O08811 Minpp1-201ENSMUST00000025827 2619 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Ercc2O08811 Fgfrl1-201ENSMUST00000013633 2329 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Ercc2O08811 Neurog1-201ENSMUST00000058475 1686 ntAPPRIS P1 BASIC19.28■□□□□ 0.68
Ercc2O08811 Mpzl1-210ENSMUST00000194437 643 ntTSL 3 BASIC19.28■□□□□ 0.68
Ercc2O08811 Fam228b-205ENSMUST00000218575 1281 ntAPPRIS ALT2 TSL 2 BASIC19.28■□□□□ 0.68
Ercc2O08811 Slc22a23-201ENSMUST00000040336 6251 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Ercc2O08811 Ntmt1-201ENSMUST00000041830 1387 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Ercc2O08811 Ascl1-201ENSMUST00000020243 2481 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Ercc2O08811 Tesmin-201ENSMUST00000025840 2234 ntAPPRIS P3 TSL 1 (best) BASIC19.28■□□□□ 0.68
Ercc2O08811 Matn4-203ENSMUST00000109358 2056 ntTSL 5 BASIC19.28■□□□□ 0.68
Ercc2O08811 Dynll2-204ENSMUST00000178105 2187 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Ercc2O08811 Gp5-201ENSMUST00000061190 2196 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Ercc2O08811 Cdan1-202ENSMUST00000110701 6384 ntAPPRIS P2 TSL 5 BASIC19.27■□□□□ 0.68
Ercc2O08811 Rcc1-202ENSMUST00000084250 2285 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Ercc2O08811 Znhit6-201ENSMUST00000098534 2339 ntAPPRIS P3 TSL 1 (best) BASIC19.27■□□□□ 0.68
Ercc2O08811 Mpc1-208ENSMUST00000155364 958 ntAPPRIS P1 TSL 2 BASIC19.27■□□□□ 0.68
Ercc2O08811 Prcd-205ENSMUST00000178875 1227 ntTSL 5 BASIC19.27■□□□□ 0.68
Ercc2O08811 Zdhhc13-201ENSMUST00000118927 2410 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Ercc2O08811 Syt3-203ENSMUST00000120262 2096 ntAPPRIS P1 TSL 5 BASIC19.27■□□□□ 0.68
Ercc2O08811 Gm4737-201ENSMUST00000059524 2093 ntAPPRIS P1 BASIC19.27■□□□□ 0.68
Ercc2O08811 BC021767-201ENSMUST00000126387 1716 ntBASIC19.27■□□□□ 0.68
Ercc2O08811 Arl4d-201ENSMUST00000039388 1382 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Ercc2O08811 Srsf4-202ENSMUST00000053819 2257 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Ercc2O08811 Btnl9-202ENSMUST00000066531 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC19.27■□□□□ 0.67
Retrieved 100 of 76,532 protein–RNA pairs in 30.3 ms