Protein–RNA interactions for Protein: O08740

Polr2j, DNA-directed RNA polymerase II subunit RPB11, mousemouse

Known RBP Predictions only

Length 117 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Polr2jO08740 Cyp4f16-201ENSMUST00000003416 2227 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Polr2jO08740 Cnot11-201ENSMUST00000003219 3162 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Polr2jO08740 AU019823-202ENSMUST00000145139 2805 ntTSL 2 BASIC18.09■□□□□ 0.49
Polr2jO08740 Rhobtb3-201ENSMUST00000022078 4980 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Polr2jO08740 Miga1-201ENSMUST00000068243 2689 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
Polr2jO08740 Cyb5r4-201ENSMUST00000168529 2644 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Polr2jO08740 Gm28523-201ENSMUST00000190040 1588 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
Polr2jO08740 Htra2-202ENSMUST00000113962 1305 ntTSL 5 BASIC18.09■□□□□ 0.49
Polr2jO08740 Bex1-202ENSMUST00000113118 754 ntAPPRIS P1 TSL 2 BASIC18.09■□□□□ 0.49
Polr2jO08740 Tex30-212ENSMUST00000152239 1046 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Polr2jO08740 Pparg-202ENSMUST00000171644 2125 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Polr2jO08740 Trim67-201ENSMUST00000041106 5694 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Polr2jO08740 Bhlhe22-201ENSMUST00000026120 3344 ntAPPRIS P1 BASIC18.09■□□□□ 0.49
Polr2jO08740 Azi2-207ENSMUST00000134433 2499 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
Polr2jO08740 Arfrp1-209ENSMUST00000170190 2483 ntTSL 5 BASIC18.09■□□□□ 0.49
Polr2jO08740 Dtwd2-201ENSMUST00000025383 2476 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Polr2jO08740 Pqlc1-207ENSMUST00000140594 2356 ntAPPRIS P3 TSL 1 (best) BASIC18.09■□□□□ 0.49
Polr2jO08740 Nkx2-1-202ENSMUST00000178477 2242 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
Polr2jO08740 Ube2d2a-201ENSMUST00000167406 2393 ntAPPRIS P1 TSL 5 BASIC18.08■□□□□ 0.48
Polr2jO08740 Smco4-203ENSMUST00000215907 994 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
Polr2jO08740 Ntsr2-202ENSMUST00000220892 846 ntTSL 3 BASIC18.08■□□□□ 0.48
Polr2jO08740 Lbx2-201ENSMUST00000041265 817 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
Polr2jO08740 Gm9922-201ENSMUST00000066461 435 ntAPPRIS P1 BASIC18.08■□□□□ 0.48
Polr2jO08740 Map6-206ENSMUST00000208605 2275 ntAPPRIS ALT2 TSL 1 (best) BASIC18.08■□□□□ 0.48
Polr2jO08740 Ica1-203ENSMUST00000115519 1706 ntAPPRIS ALT2 TSL 5 BASIC18.08■□□□□ 0.48
Polr2jO08740 Hcn2-202ENSMUST00000099513 3195 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
Polr2jO08740 B4galt4-205ENSMUST00000114712 2168 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
Polr2jO08740 Klhl36-201ENSMUST00000034287 2181 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
Polr2jO08740 Cblc-201ENSMUST00000043822 1662 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
Polr2jO08740 Lhfp-201ENSMUST00000059562 2108 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
Polr2jO08740 Mgarp-202ENSMUST00000108046 1409 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
Polr2jO08740 Gm5953-201ENSMUST00000220644 2616 ntBASIC18.07■□□□□ 0.48
Polr2jO08740 Sox12-201ENSMUST00000063332 4169 ntAPPRIS P1 TSL 2 BASIC18.07■□□□□ 0.48
Polr2jO08740 Ubr5-201ENSMUST00000110336 9242 ntTSL 5 BASIC18.07■□□□□ 0.48
Polr2jO08740 3010003L21Rik-201ENSMUST00000047953 1729 ntTSL 5 BASIC18.07■□□□□ 0.48
Polr2jO08740 Gm10575-201ENSMUST00000097947 1671 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
Polr2jO08740 Gm20522-201ENSMUST00000173576 784 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
Polr2jO08740 Gm5576-201ENSMUST00000075809 1236 ntBASIC18.07■□□□□ 0.48
Polr2jO08740 Kcns1-201ENSMUST00000045196 2712 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Polr2jO08740 Xrcc6-202ENSMUST00000100399 3296 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Polr2jO08740 Gpc6-204ENSMUST00000125435 2423 ntAPPRIS ALT2 TSL 1 (best) BASIC18.07■□□□□ 0.48
Polr2jO08740 Lrrc75b-201ENSMUST00000051129 4601 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Polr2jO08740 Arx-201ENSMUST00000046565 2881 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Polr2jO08740 Snx16-202ENSMUST00000099223 2512 ntAPPRIS ALT2 TSL 1 (best) BASIC18.06■□□□□ 0.48
Polr2jO08740 Lrch3-208ENSMUST00000165616 1875 ntTSL 5 BASIC18.06■□□□□ 0.48
Polr2jO08740 Gm12660-201ENSMUST00000123764 664 ntTSL 3 BASIC18.06■□□□□ 0.48
Polr2jO08740 H3f3a-207ENSMUST00000162814 724 ntAPPRIS P2 TSL 3 BASIC18.06■□□□□ 0.48
Polr2jO08740 Usf2-211ENSMUST00000172417 648 ntTSL 5 BASIC18.06■□□□□ 0.48
Polr2jO08740 D630002J18Rik-201ENSMUST00000181854 1115 ntBASIC18.06■□□□□ 0.48
Polr2jO08740 Ostc-201ENSMUST00000043937 1067 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Polr2jO08740 Ciz1-205ENSMUST00000113338 2666 ntAPPRIS P3 TSL 5 BASIC18.06■□□□□ 0.48
Polr2jO08740 Hoxa11os-201ENSMUST00000134512 1839 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
Polr2jO08740 Slc35a2-203ENSMUST00000115663 1527 ntAPPRIS P4 TSL 2 BASIC18.06■□□□□ 0.48
Polr2jO08740 Ripply3-201ENSMUST00000023660 1531 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Polr2jO08740 Snrnp70-201ENSMUST00000074575 1735 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Polr2jO08740 Alg1-201ENSMUST00000049207 1669 ntAPPRIS ALT2 TSL 2 BASIC18.06■□□□□ 0.48
Polr2jO08740 Dmtn-210ENSMUST00000228824 2377 ntBASIC18.05■□□□□ 0.48
Polr2jO08740 Socs6-203ENSMUST00000125362 2814 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Polr2jO08740 Elac2-201ENSMUST00000071891 2771 ntAPPRIS P2 TSL 1 (best) BASIC18.05■□□□□ 0.48
Polr2jO08740 Cdh4-201ENSMUST00000000314 6388 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Polr2jO08740 Olfm2-204ENSMUST00000217198 2005 ntAPPRIS ALT2 TSL 3 BASIC18.05■□□□□ 0.48
Polr2jO08740 Cnn3-201ENSMUST00000029773 2049 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Polr2jO08740 Paip2-203ENSMUST00000115735 1521 ntAPPRIS P1 TSL 5 BASIC18.05■□□□□ 0.48
Polr2jO08740 Gnptg-202ENSMUST00000115154 2249 ntAPPRIS ALT2 TSL 1 (best) BASIC18.05■□□□□ 0.48
Polr2jO08740 Pou2f2-205ENSMUST00000108417 1937 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
Polr2jO08740 Ccser1-203ENSMUST00000126214 5657 ntAPPRIS P1 TSL 5 BASIC18.05■□□□□ 0.48
Polr2jO08740 Grk6-206ENSMUST00000224995 2971 ntBASIC18.05■□□□□ 0.48
Polr2jO08740 Csnk1e-203ENSMUST00000122044 3174 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
Polr2jO08740 Asap2-202ENSMUST00000064595 5678 ntAPPRIS P4 TSL 5 BASIC18.05■□□□□ 0.48
Polr2jO08740 Mzt1-201ENSMUST00000042662 2240 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Polr2jO08740 Deptor-203ENSMUST00000100660 1377 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
Polr2jO08740 1700086O06Rik-202ENSMUST00000181871 1564 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
Polr2jO08740 Rchy1-201ENSMUST00000031345 1967 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Polr2jO08740 Kcnk1-202ENSMUST00000212831 1309 ntTSL 5 BASIC18.04■□□□□ 0.48
Polr2jO08740 Twist2-201ENSMUST00000007949 1329 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Polr2jO08740 Rad1-201ENSMUST00000022856 1514 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Polr2jO08740 Osbpl1a-203ENSMUST00000118313 2893 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
Polr2jO08740 Dip2c-203ENSMUST00000174552 8023 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Polr2jO08740 Pigw-201ENSMUST00000067058 2675 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Polr2jO08740 1700003E16Rik-202ENSMUST00000203203 2070 ntTSL 2 BASIC18.04■□□□□ 0.48
Polr2jO08740 Gpc3-202ENSMUST00000114857 1880 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
Polr2jO08740 Nptx1-201ENSMUST00000026670 5217 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Polr2jO08740 Lrfn1-201ENSMUST00000055110 1479 ntAPPRIS P3 TSL 5 BASIC18.04■□□□□ 0.48
Polr2jO08740 Zfp335os-201ENSMUST00000129364 1127 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
Polr2jO08740 Nkd1-201ENSMUST00000034086 3035 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Polr2jO08740 Gm26798-201ENSMUST00000181384 2837 ntTSL 5 BASIC18.04■□□□□ 0.48
Polr2jO08740 Atf5-202ENSMUST00000107893 1735 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Polr2jO08740 Leng1-201ENSMUST00000019878 2222 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Polr2jO08740 Chst7-201ENSMUST00000044138 2206 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Polr2jO08740 Plekhg3-207ENSMUST00000219063 4535 ntAPPRIS ALT2 TSL 5 BASIC18.03■□□□□ 0.48
Polr2jO08740 Dmwd-202ENSMUST00000108479 2388 ntAPPRIS ALT2 TSL 5 BASIC18.03■□□□□ 0.48
Polr2jO08740 Swsap1-201ENSMUST00000053583 1838 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Polr2jO08740 Tpra1-201ENSMUST00000055022 1820 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Polr2jO08740 Hbs1l-202ENSMUST00000061324 1998 ntTSL 3 BASIC18.03■□□□□ 0.48
Polr2jO08740 4930539J05Rik-202ENSMUST00000182865 511 ntTSL 2 BASIC18.03■□□□□ 0.48
Polr2jO08740 Spcs1-204ENSMUST00000226782 949 ntBASIC18.03■□□□□ 0.48
Polr2jO08740 Trim58-201ENSMUST00000075084 2192 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Polr2jO08740 Sec61a2-202ENSMUST00000102981 2448 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
Polr2jO08740 Gabra4-205ENSMUST00000199357 2407 ntAPPRIS ALT2 TSL 1 (best) BASIC18.02■□□□□ 0.48
Polr2jO08740 Eid2b-201ENSMUST00000094651 1751 ntAPPRIS P1 BASIC18.02■□□□□ 0.48
Retrieved 100 of 76,532 protein–RNA pairs in 18.5 ms