Protein–RNA interactions for Protein: J3QPR6

Rfpl4b, MCG1377, mousemouse

Predictions only

Length 266 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rfpl4bJ3QPR6 Dohh-206ENSMUST00000131968 672 ntAPPRIS P1 TSL 3 BASIC21.79■■□□□ 1.08
Rfpl4bJ3QPR6 Gm13647-201ENSMUST00000154654 622 ntTSL 5 BASIC21.79■■□□□ 1.08
Rfpl4bJ3QPR6 Bnip1-201ENSMUST00000015725 1085 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
Rfpl4bJ3QPR6 Cxxc4-201ENSMUST00000166288 1290 ntAPPRIS ALT2 TSL 5 BASIC21.79■■□□□ 1.08
Rfpl4bJ3QPR6 Cmc1-202ENSMUST00000215799 531 ntTSL 1 (best) BASIC21.79■■□□□ 1.08
Rfpl4bJ3QPR6 Gm30003-201ENSMUST00000200700 1433 ntTSL 1 (best) BASIC21.79■■□□□ 1.08
Rfpl4bJ3QPR6 Tmem250-ps-201ENSMUST00000133808 2483 ntTSL 2 BASIC21.79■■□□□ 1.08
Rfpl4bJ3QPR6 Hook2-203ENSMUST00000209764 2516 ntTSL 5 BASIC21.78■■□□□ 1.08
Rfpl4bJ3QPR6 Neurl4-202ENSMUST00000108617 4892 ntAPPRIS ALT2 TSL 5 BASIC21.78■■□□□ 1.08
Rfpl4bJ3QPR6 Arl5a-201ENSMUST00000036541 5239 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
Rfpl4bJ3QPR6 Polr1d-202ENSMUST00000110557 1137 ntTSL 1 (best) BASIC21.78■■□□□ 1.08
Rfpl4bJ3QPR6 Cracr2b-207ENSMUST00000170879 1158 ntAPPRIS ALT2 TSL 5 BASIC21.78■■□□□ 1.08
Rfpl4bJ3QPR6 Lrp3-202ENSMUST00000122409 4147 ntTSL 1 (best) BASIC21.78■■□□□ 1.08
Rfpl4bJ3QPR6 Slc35f4-204ENSMUST00000138884 1810 ntTSL 1 (best) BASIC21.78■■□□□ 1.08
Rfpl4bJ3QPR6 Tmem145-201ENSMUST00000108409 2298 ntAPPRIS P2 TSL 2 BASIC21.77■■□□□ 1.08
Rfpl4bJ3QPR6 Cbfb-204ENSMUST00000109395 2709 ntTSL 1 (best) BASIC21.77■■□□□ 1.08
Rfpl4bJ3QPR6 Gm13836-201ENSMUST00000121159 501 ntBASIC21.77■■□□□ 1.08
Rfpl4bJ3QPR6 Gm29458-201ENSMUST00000187093 354 ntTSL 3 BASIC21.77■■□□□ 1.08
Rfpl4bJ3QPR6 AC142113.1-201ENSMUST00000214931 801 ntTSL 5 BASIC21.77■■□□□ 1.08
Rfpl4bJ3QPR6 Hp1bp3-205ENSMUST00000105827 5155 ntAPPRIS ALT2 TSL 5 BASIC21.77■■□□□ 1.08
Rfpl4bJ3QPR6 Rab34-202ENSMUST00000056241 1558 ntTSL 5 BASIC21.77■■□□□ 1.08
Rfpl4bJ3QPR6 Adcy9-203ENSMUST00000120080 4974 ntAPPRIS ALT2 TSL 1 (best) BASIC21.76■■□□□ 1.07
Rfpl4bJ3QPR6 Cyp4f13-204ENSMUST00000139353 1389 ntTSL 1 (best) BASIC21.76■■□□□ 1.07
Rfpl4bJ3QPR6 Kcne1l-201ENSMUST00000134825 1543 ntAPPRIS P1 BASIC21.76■■□□□ 1.07
Rfpl4bJ3QPR6 Gm11769-201ENSMUST00000140273 1657 ntTSL 1 (best) BASIC21.76■■□□□ 1.07
Rfpl4bJ3QPR6 6820408C15Rik-201ENSMUST00000039961 1684 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
Rfpl4bJ3QPR6 Fam105a-201ENSMUST00000100739 2867 ntTSL 1 (best) BASIC21.76■■□□□ 1.07
Rfpl4bJ3QPR6 Rpl27-202ENSMUST00000107249 732 ntAPPRIS P1 TSL 2 BASIC21.76■■□□□ 1.07
Rfpl4bJ3QPR6 Gm1673-203ENSMUST00000114383 511 ntAPPRIS ALT2 TSL 1 (best) BASIC21.76■■□□□ 1.07
Rfpl4bJ3QPR6 Meis3-201ENSMUST00000002495 1731 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
Rfpl4bJ3QPR6 Chpt1-202ENSMUST00000073783 852 ntAPPRIS ALT2 TSL 1 (best) BASIC21.76■■□□□ 1.07
Rfpl4bJ3QPR6 Arrb2-205ENSMUST00000108568 1777 ntTSL 1 (best) BASIC21.76■■□□□ 1.07
Rfpl4bJ3QPR6 Cobll1-204ENSMUST00000112430 4917 ntAPPRIS ALT2 TSL 1 (best) BASIC21.76■■□□□ 1.07
Rfpl4bJ3QPR6 Hnrnph3-202ENSMUST00000118898 2168 ntAPPRIS ALT1 TSL 5 BASIC21.75■■□□□ 1.07
Rfpl4bJ3QPR6 Schip1-206ENSMUST00000182719 2156 ntTSL 1 (best) BASIC21.75■■□□□ 1.07
Rfpl4bJ3QPR6 Fgf8-202ENSMUST00000026241 1168 ntTSL 1 (best) BASIC21.75■■□□□ 1.07
Rfpl4bJ3QPR6 Gm16933-201ENSMUST00000141741 2169 ntTSL 1 (best) BASIC21.75■■□□□ 1.07
Rfpl4bJ3QPR6 Atoh8-201ENSMUST00000042646 2355 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
Rfpl4bJ3QPR6 Esx1-202ENSMUST00000113066 1692 ntAPPRIS ALT2 TSL 1 (best) BASIC21.75■■□□□ 1.07
Rfpl4bJ3QPR6 Alg1-201ENSMUST00000049207 1669 ntAPPRIS ALT2 TSL 2 BASIC21.75■■□□□ 1.07
Rfpl4bJ3QPR6 Eml2-202ENSMUST00000117338 2765 ntAPPRIS ALT2 TSL 5 BASIC21.75■■□□□ 1.07
Rfpl4bJ3QPR6 Ddx39b-201ENSMUST00000068056 1739 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
Rfpl4bJ3QPR6 Ndel1-201ENSMUST00000018880 2382 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
Rfpl4bJ3QPR6 Ccnd2-202ENSMUST00000201066 983 ntTSL 2 BASIC21.74■■□□□ 1.07
Rfpl4bJ3QPR6 Aprt-204ENSMUST00000212093 723 ntTSL 2 BASIC21.74■■□□□ 1.07
Rfpl4bJ3QPR6 Gm45822-201ENSMUST00000212231 259 ntTSL 3 BASIC21.74■■□□□ 1.07
Rfpl4bJ3QPR6 Gart-202ENSMUST00000120450 1865 ntTSL 1 (best) BASIC21.74■■□□□ 1.07
Rfpl4bJ3QPR6 Porcn-202ENSMUST00000082320 1883 ntAPPRIS ALT1 TSL 1 (best) BASIC21.74■■□□□ 1.07
Rfpl4bJ3QPR6 Kirrel3-202ENSMUST00000115148 2851 ntAPPRIS P3 TSL 5 BASIC21.74■■□□□ 1.07
Rfpl4bJ3QPR6 Cers1-203ENSMUST00000165819 2728 ntAPPRIS P4 TSL 1 (best) BASIC21.74■■□□□ 1.07
Rfpl4bJ3QPR6 Lmbr1l-201ENSMUST00000023736 2300 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
Rfpl4bJ3QPR6 Syde2-201ENSMUST00000039517 5495 ntAPPRIS P2 TSL 1 (best) BASIC21.74■■□□□ 1.07
Rfpl4bJ3QPR6 Adap2-201ENSMUST00000021050 1785 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
Rfpl4bJ3QPR6 Coq9-201ENSMUST00000034234 1789 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
Rfpl4bJ3QPR6 March11-202ENSMUST00000140840 1558 ntAPPRIS P3 TSL 2 BASIC21.74■■□□□ 1.07
Rfpl4bJ3QPR6 Vstm2b-201ENSMUST00000044705 2627 ntAPPRIS P1 TSL 5 BASIC21.74■■□□□ 1.07
Rfpl4bJ3QPR6 Cnnm4-201ENSMUST00000153128 4547 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
Rfpl4bJ3QPR6 Ppp1r16a-201ENSMUST00000037551 2692 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
Rfpl4bJ3QPR6 Ppp6r2-202ENSMUST00000226221 2559 ntBASIC21.73■■□□□ 1.07
Rfpl4bJ3QPR6 Srxn1-201ENSMUST00000041500 2812 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
Rfpl4bJ3QPR6 Slc35f4-201ENSMUST00000074368 1931 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
Rfpl4bJ3QPR6 Stx18-201ENSMUST00000031008 1471 ntTSL 1 (best) BASIC21.73■■□□□ 1.07
Rfpl4bJ3QPR6 Nab2-202ENSMUST00000099157 2311 ntTSL 1 (best) BASIC21.73■■□□□ 1.07
Rfpl4bJ3QPR6 Fgf2os-201ENSMUST00000153785 1441 ntTSL 1 (best) BASIC21.72■■□□□ 1.07
Rfpl4bJ3QPR6 Dio3-201ENSMUST00000097228 1449 ntBASIC21.72■■□□□ 1.07
Rfpl4bJ3QPR6 Rab43-203ENSMUST00000078647 4605 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
Rfpl4bJ3QPR6 Mpg-201ENSMUST00000020528 1737 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
Rfpl4bJ3QPR6 Fbxo22-204ENSMUST00000146201 2009 ntTSL 1 (best) BASIC21.72■■□□□ 1.07
Rfpl4bJ3QPR6 Rab28-205ENSMUST00000202913 863 ntTSL 1 (best) BASIC21.72■■□□□ 1.07
Rfpl4bJ3QPR6 Naxe-201ENSMUST00000029708 908 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
Rfpl4bJ3QPR6 Intu-201ENSMUST00000061590 1589 ntAPPRIS ALT2 TSL 2 BASIC21.72■■□□□ 1.07
Rfpl4bJ3QPR6 Kcnn4-202ENSMUST00000205428 1945 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
Rfpl4bJ3QPR6 Donson-203ENSMUST00000117159 2215 ntAPPRIS ALT2 TSL 1 (best) BASIC21.72■■□□□ 1.07
Rfpl4bJ3QPR6 Nkx2-1-202ENSMUST00000178477 2242 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
Rfpl4bJ3QPR6 Pnldc1-201ENSMUST00000163394 1689 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
Rfpl4bJ3QPR6 Tradd-201ENSMUST00000034359 1689 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
Rfpl4bJ3QPR6 Gabra5-201ENSMUST00000068456 2671 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
Rfpl4bJ3QPR6 Ptar1-201ENSMUST00000099560 2064 ntAPPRIS P1 TSL 5 BASIC21.71■■□□□ 1.07
Rfpl4bJ3QPR6 Siah1b-201ENSMUST00000037928 1783 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
Rfpl4bJ3QPR6 Cln5-201ENSMUST00000022721 2445 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
Rfpl4bJ3QPR6 Bag5-201ENSMUST00000054636 2139 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
Rfpl4bJ3QPR6 Gabbr2-201ENSMUST00000107749 5750 ntAPPRIS P1 TSL 2 BASIC21.71■■□□□ 1.07
Rfpl4bJ3QPR6 Rnf111-204ENSMUST00000213647 4961 ntAPPRIS ALT2 TSL 1 (best) BASIC21.71■■□□□ 1.07
Rfpl4bJ3QPR6 Ghitm-201ENSMUST00000042564 2573 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
Rfpl4bJ3QPR6 Agtpbp1-222ENSMUST00000171606 3037 ntTSL 1 (best) BASIC21.71■■□□□ 1.07
Rfpl4bJ3QPR6 Ttc32-202ENSMUST00000219470 1645 ntTSL 1 (best) BASIC21.71■■□□□ 1.07
Rfpl4bJ3QPR6 Creb1-203ENSMUST00000171164 1287 ntTSL 1 (best) BASIC21.71■■□□□ 1.07
Rfpl4bJ3QPR6 6530437J22Rik-201ENSMUST00000207515 773 ntTSL 1 (best) BASIC21.71■■□□□ 1.07
Rfpl4bJ3QPR6 Atf5-202ENSMUST00000107893 1735 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
Rfpl4bJ3QPR6 Ttc39a-203ENSMUST00000106619 1778 ntTSL 1 (best) BASIC21.71■■□□□ 1.07
Rfpl4bJ3QPR6 Hras-201ENSMUST00000026572 2828 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.07
Rfpl4bJ3QPR6 Hoxc6-201ENSMUST00000001711 1581 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
Rfpl4bJ3QPR6 Mrps16-201ENSMUST00000061444 2572 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
Rfpl4bJ3QPR6 4932443I19Rik-204ENSMUST00000214337 1212 ntAPPRIS ALT2 TSL 5 BASIC21.7■■□□□ 1.06
Rfpl4bJ3QPR6 Clybl-201ENSMUST00000026625 1231 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
Rfpl4bJ3QPR6 Arfrp1-203ENSMUST00000127988 2447 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
Rfpl4bJ3QPR6 Vti1b-201ENSMUST00000055262 1490 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
Rfpl4bJ3QPR6 Zfp3-201ENSMUST00000060444 2061 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
Rfpl4bJ3QPR6 Gm20100-201ENSMUST00000209418 2272 ntBASIC21.69■■□□□ 1.06
Rfpl4bJ3QPR6 Npr3-205ENSMUST00000228603 2437 ntAPPRIS ALT2 BASIC21.69■■□□□ 1.06
Retrieved 100 of 76,532 protein–RNA pairs in 35.8 ms