Protein–RNA interactions for Protein: J3KMR8

Gm17535, Predicted gene, 17535, mousemouse

Predictions only

Length 224 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gm17535J3KMR8 Rex1bd-206ENSMUST00000136913 671 ntAPPRIS ALT2 TSL 5 BASIC20.2■□□□□ 0.82
Gm17535J3KMR8 Myd88-201ENSMUST00000035092 1960 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Gm17535J3KMR8 Cnnm1-201ENSMUST00000165311 5037 ntAPPRIS P2 TSL 1 (best) BASIC20.2■□□□□ 0.82
Gm17535J3KMR8 Mfn1-201ENSMUST00000091257 4562 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Gm17535J3KMR8 Plin1-201ENSMUST00000032762 1916 ntAPPRIS P1 TSL 5 BASIC20.19■□□□□ 0.82
Gm17535J3KMR8 Gcgr-201ENSMUST00000026119 1957 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Gm17535J3KMR8 Rpl26-202ENSMUST00000101014 657 ntAPPRIS ALT1 TSL 5 BASIC20.19■□□□□ 0.82
Gm17535J3KMR8 Tspan2os-201ENSMUST00000146624 590 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
Gm17535J3KMR8 Gm44210-201ENSMUST00000205253 713 ntTSL 3 BASIC20.19■□□□□ 0.82
Gm17535J3KMR8 Cox4i1-201ENSMUST00000034276 745 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Gm17535J3KMR8 Gnpda1-201ENSMUST00000063814 2289 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Gm17535J3KMR8 Caml-201ENSMUST00000021963 1382 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Gm17535J3KMR8 Fgfr3-202ENSMUST00000087820 2630 ntAPPRIS ALT2 TSL 5 BASIC20.19■□□□□ 0.82
Gm17535J3KMR8 Zranb1-202ENSMUST00000106157 5008 ntAPPRIS P2 TSL 5 BASIC20.18■□□□□ 0.82
Gm17535J3KMR8 Gm43545-201ENSMUST00000196765 2779 ntBASIC20.18■□□□□ 0.82
Gm17535J3KMR8 Fam20b-201ENSMUST00000086153 4414 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Gm17535J3KMR8 Romo1-202ENSMUST00000109597 550 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Gm17535J3KMR8 Pabpn1-205ENSMUST00000141446 912 ntAPPRIS ALT2 TSL 3 BASIC20.18■□□□□ 0.82
Gm17535J3KMR8 Gm19094-201ENSMUST00000209791 1246 ntBASIC20.18■□□□□ 0.82
Gm17535J3KMR8 Gm45890-201ENSMUST00000212043 1026 ntTSL 5 BASIC20.18■□□□□ 0.82
Gm17535J3KMR8 AC142113.1-201ENSMUST00000214931 801 ntTSL 5 BASIC20.18■□□□□ 0.82
Gm17535J3KMR8 BC107364-201ENSMUST00000093126 1159 ntAPPRIS P4 TSL 1 (best) BASIC20.18■□□□□ 0.82
Gm17535J3KMR8 BC107364-202ENSMUST00000098841 1065 ntAPPRIS ALT2 TSL 1 (best) BASIC20.18■□□□□ 0.82
Gm17535J3KMR8 Tssk6-201ENSMUST00000050373 1335 ntAPPRIS P1 BASIC20.18■□□□□ 0.82
Gm17535J3KMR8 Nbl1-201ENSMUST00000042844 1793 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Gm17535J3KMR8 Paqr6-204ENSMUST00000147991 1670 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Gm17535J3KMR8 Gnas-208ENSMUST00000109087 1716 ntAPPRIS P4 TSL 1 (best) BASIC20.17■□□□□ 0.82
Gm17535J3KMR8 Oxct2a-201ENSMUST00000102640 1760 ntAPPRIS P1 BASIC20.17■□□□□ 0.82
Gm17535J3KMR8 Eif2b4-212ENSMUST00000202758 1767 ntTSL 5 BASIC20.17■□□□□ 0.82
Gm17535J3KMR8 Aunip-201ENSMUST00000105866 1275 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Gm17535J3KMR8 Gm12356-201ENSMUST00000122854 353 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
Gm17535J3KMR8 Smim27-201ENSMUST00000129758 1044 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Gm17535J3KMR8 1810059H22Rik-205ENSMUST00000204570 690 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
Gm17535J3KMR8 Gm4968-201ENSMUST00000071458 858 ntBASIC20.17■□□□□ 0.82
Gm17535J3KMR8 Serbp1-211ENSMUST00000204293 1336 ntAPPRIS ALT2 TSL 1 (best) BASIC20.17■□□□□ 0.82
Gm17535J3KMR8 Gsto2-201ENSMUST00000056159 1351 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Gm17535J3KMR8 Chtf8-201ENSMUST00000169312 2730 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
Gm17535J3KMR8 Ier2-201ENSMUST00000060427 1522 ntAPPRIS P1 BASIC20.17■□□□□ 0.82
Gm17535J3KMR8 Cbfb-202ENSMUST00000109392 2891 ntAPPRIS ALT1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Gm17535J3KMR8 Dnaja4-201ENSMUST00000070070 3003 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Gm17535J3KMR8 3110082J24Rik-201ENSMUST00000127749 327 ntAPPRIS P1 TSL 5 BASIC20.16■□□□□ 0.82
Gm17535J3KMR8 Gm13441-201ENSMUST00000140104 1168 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
Gm17535J3KMR8 Rab34-209ENSMUST00000207728 567 ntTSL 2 BASIC20.16■□□□□ 0.82
Gm17535J3KMR8 Gm10153-202ENSMUST00000210290 963 ntAPPRIS P1 BASIC20.16■□□□□ 0.82
Gm17535J3KMR8 Gng5-201ENSMUST00000090031 593 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Gm17535J3KMR8 Fpgs-201ENSMUST00000028148 2273 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Gm17535J3KMR8 Foxj3-209ENSMUST00000162267 1391 ntAPPRIS ALT2 TSL 1 (best) BASIC20.16■□□□□ 0.82
Gm17535J3KMR8 Gm10167-201ENSMUST00000150411 1479 ntBASIC20.16■□□□□ 0.82
Gm17535J3KMR8 Snx20-201ENSMUST00000034087 1699 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Gm17535J3KMR8 Impdh2-201ENSMUST00000081111 1858 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Gm17535J3KMR8 Rora-202ENSMUST00000113624 2591 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
Gm17535J3KMR8 Shox2-201ENSMUST00000029422 3079 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
Gm17535J3KMR8 Olfr718-ps1-204ENSMUST00000218872 963 ntAPPRIS ALT2 BASIC20.15■□□□□ 0.82
Gm17535J3KMR8 Zcchc13-201ENSMUST00000033692 1085 ntAPPRIS P1 BASIC20.15■□□□□ 0.82
Gm17535J3KMR8 Ttc32-201ENSMUST00000085741 1000 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
Gm17535J3KMR8 Mgll-205ENSMUST00000150180 1312 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
Gm17535J3KMR8 Mdfi-201ENSMUST00000035375 1371 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
Gm17535J3KMR8 Gm43859-201ENSMUST00000200075 1412 ntBASIC20.15■□□□□ 0.82
Gm17535J3KMR8 Coq10b-201ENSMUST00000027125 1733 ntAPPRIS ALT2 TSL 1 (best) BASIC20.15■□□□□ 0.82
Gm17535J3KMR8 Krt87-201ENSMUST00000081945 1826 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
Gm17535J3KMR8 Gm18688-201ENSMUST00000204695 1859 ntBASIC20.15■□□□□ 0.82
Gm17535J3KMR8 Baiap2l2-201ENSMUST00000165408 2100 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
Gm17535J3KMR8 Cnbp-208ENSMUST00000204653 2175 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
Gm17535J3KMR8 Cnbp-201ENSMUST00000032138 2178 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
Gm17535J3KMR8 AC123857.1-201ENSMUST00000181053 2312 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
Gm17535J3KMR8 Cstf2-202ENSMUST00000113286 2717 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
Gm17535J3KMR8 Zmiz2-201ENSMUST00000012612 4199 ntAPPRIS P2 TSL 5 BASIC20.15■□□□□ 0.82
Gm17535J3KMR8 Kcnc3-201ENSMUST00000107906 5062 ntAPPRIS ALT2 TSL 1 (best) BASIC20.15■□□□□ 0.82
Gm17535J3KMR8 Zcchc14-201ENSMUST00000046386 7444 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.82
Gm17535J3KMR8 Prmt9-201ENSMUST00000056237 2781 ntAPPRIS P2 TSL 1 (best) BASIC20.14■□□□□ 0.82
Gm17535J3KMR8 Irx3-201ENSMUST00000093312 2610 ntAPPRIS P4 TSL 1 (best) BASIC20.14■□□□□ 0.82
Gm17535J3KMR8 Marc2-201ENSMUST00000068725 1917 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
Gm17535J3KMR8 Lefty1-201ENSMUST00000037361 1620 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
Gm17535J3KMR8 Pthlh-201ENSMUST00000052296 1603 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
Gm17535J3KMR8 Mgat5b-201ENSMUST00000103027 4258 ntAPPRIS P1 TSL 5 BASIC20.14■□□□□ 0.81
Gm17535J3KMR8 Gdf1-201ENSMUST00000207684 1349 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
Gm17535J3KMR8 Immp2l-203ENSMUST00000134965 977 ntAPPRIS P1 TSL 5 BASIC20.14■□□□□ 0.81
Gm17535J3KMR8 Ypel3-201ENSMUST00000038614 973 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
Gm17535J3KMR8 Gatad1-201ENSMUST00000007559 2545 ntAPPRIS P2 TSL 1 (best) BASIC20.14■□□□□ 0.81
Gm17535J3KMR8 B4gat1-201ENSMUST00000053705 2035 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
Gm17535J3KMR8 Vps26a-201ENSMUST00000092473 2712 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
Gm17535J3KMR8 Iglon5-201ENSMUST00000107974 2622 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
Gm17535J3KMR8 Gm37563-201ENSMUST00000192580 1513 ntBASIC20.13■□□□□ 0.81
Gm17535J3KMR8 Sigmar1-202ENSMUST00000071561 1547 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
Gm17535J3KMR8 Sept7-202ENSMUST00000165594 2516 ntAPPRIS P2 TSL 5 BASIC20.13■□□□□ 0.81
Gm17535J3KMR8 Adpgk-201ENSMUST00000026266 2464 ntAPPRIS ALT1 TSL 1 (best) BASIC20.13■□□□□ 0.81
Gm17535J3KMR8 Bend7-204ENSMUST00000184139 2251 ntAPPRIS ALT2 TSL 1 (best) BASIC20.13■□□□□ 0.81
Gm17535J3KMR8 Dcbld1-201ENSMUST00000069004 3024 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
Gm17535J3KMR8 Dact3-201ENSMUST00000108493 2989 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
Gm17535J3KMR8 A930018P22Rik-201ENSMUST00000040374 822 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
Gm17535J3KMR8 Zfp3-201ENSMUST00000060444 2061 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
Gm17535J3KMR8 Thra-201ENSMUST00000064187 2452 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
Gm17535J3KMR8 Qrich1-206ENSMUST00000193258 2291 ntTSL 2 BASIC20.13■□□□□ 0.81
Gm17535J3KMR8 Esx1-201ENSMUST00000074698 1600 ntAPPRIS P2 TSL 1 (best) BASIC20.13■□□□□ 0.81
Gm17535J3KMR8 Polr2c-201ENSMUST00000109521 1580 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
Gm17535J3KMR8 Ift57-201ENSMUST00000046777 2601 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
Gm17535J3KMR8 Dyrk1b-203ENSMUST00000172761 2018 ntAPPRIS ALT1 TSL 1 (best) BASIC20.12■□□□□ 0.81
Gm17535J3KMR8 Zfp777-202ENSMUST00000114583 3111 ntAPPRIS P3 TSL 5 BASIC20.12■□□□□ 0.81
Gm17535J3KMR8 3830408C21Rik-206ENSMUST00000225489 1810 ntBASIC20.12■□□□□ 0.81
Gm17535J3KMR8 Nat9-201ENSMUST00000103038 1143 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
Retrieved 100 of 76,532 protein–RNA pairs in 23.7 ms