Protein–RNA interactions for Protein: F7BJK1

Pcdh1, Protocadherin 1 (Fragment), mousemouse

Predictions only

Length 1,077 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdh1F7BJK1 Wnk2-210ENSMUST00000162403 6147 ntAPPRIS ALT2 TSL 5 BASIC16.98■□□□□ 0.31
Pcdh1F7BJK1 Gm10209-201ENSMUST00000203397 1607 ntBASIC16.98■□□□□ 0.31
Pcdh1F7BJK1 Gorasp2-202ENSMUST00000112201 2417 ntAPPRIS ALT2 TSL 1 (best) BASIC16.98■□□□□ 0.31
Pcdh1F7BJK1 Ezh2-204ENSMUST00000114618 2775 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
Pcdh1F7BJK1 Herpud2-201ENSMUST00000008573 2781 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Pcdh1F7BJK1 Hpca-204ENSMUST00000116444 1847 ntAPPRIS P1 TSL 5 BASIC16.98■□□□□ 0.31
Pcdh1F7BJK1 Gm28523-201ENSMUST00000190040 1588 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
Pcdh1F7BJK1 Plk3-201ENSMUST00000076859 2378 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Pcdh1F7BJK1 Hopxos-201ENSMUST00000148568 1661 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
Pcdh1F7BJK1 Slc30a4-202ENSMUST00000099457 3170 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
Pcdh1F7BJK1 Krt4-201ENSMUST00000023797 2132 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Pcdh1F7BJK1 Creld1-201ENSMUST00000032422 2306 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Pcdh1F7BJK1 Sox30-201ENSMUST00000049038 2997 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Pcdh1F7BJK1 Anks1b-208ENSMUST00000182053 1649 ntTSL 5 BASIC16.97■□□□□ 0.31
Pcdh1F7BJK1 Tex30-212ENSMUST00000152239 1046 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Pcdh1F7BJK1 H3f3a-207ENSMUST00000162814 724 ntAPPRIS P2 TSL 3 BASIC16.97■□□□□ 0.31
Pcdh1F7BJK1 AC117245.1-201ENSMUST00000215481 566 ntTSL 3 BASIC16.97■□□□□ 0.31
Pcdh1F7BJK1 Tyw5-209ENSMUST00000162686 1847 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Pcdh1F7BJK1 Syncrip-205ENSMUST00000173801 2944 ntAPPRIS ALT1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Pcdh1F7BJK1 Dtx4-201ENSMUST00000045521 5765 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Pcdh1F7BJK1 Zfp771-201ENSMUST00000052509 1484 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Pcdh1F7BJK1 Leng1-201ENSMUST00000019878 2222 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Pcdh1F7BJK1 Ctbp2-201ENSMUST00000033269 2321 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Pcdh1F7BJK1 Tgfb1-201ENSMUST00000002678 2175 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
Pcdh1F7BJK1 Arrb1-210ENSMUST00000179755 7135 ntTSL 5 BASIC16.96■□□□□ 0.31
Pcdh1F7BJK1 Arrb1-202ENSMUST00000098266 7132 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
Pcdh1F7BJK1 Adpgk-205ENSMUST00000217570 2484 ntAPPRIS P2 TSL 1 (best) BASIC16.96■□□□□ 0.31
Pcdh1F7BJK1 Ppp2r1b-206ENSMUST00000175645 1931 ntAPPRIS ALT2 TSL 5 BASIC16.96■□□□□ 0.31
Pcdh1F7BJK1 Actl6a-201ENSMUST00000029214 2010 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
Pcdh1F7BJK1 Pafah1b1-201ENSMUST00000021091 5803 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
Pcdh1F7BJK1 Asap2-203ENSMUST00000090834 5097 ntTSL 5 BASIC16.96■□□□□ 0.31
Pcdh1F7BJK1 Zfp78-205ENSMUST00000208030 2169 ntAPPRIS ALT2 TSL 1 (best) BASIC16.96■□□□□ 0.31
Pcdh1F7BJK1 Pxdc1-202ENSMUST00000053459 2684 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
Pcdh1F7BJK1 Srsf1-201ENSMUST00000079866 2948 ntTSL 1 (best) BASIC16.96■□□□□ 0.3
Pcdh1F7BJK1 Gm11373-201ENSMUST00000129791 2819 ntTSL 5 BASIC16.96■□□□□ 0.3
Pcdh1F7BJK1 Lifr-202ENSMUST00000164529 2844 ntAPPRIS ALT2 TSL 1 (best) BASIC16.96■□□□□ 0.3
Pcdh1F7BJK1 Gm42939-201ENSMUST00000197514 2205 ntBASIC16.96■□□□□ 0.3
Pcdh1F7BJK1 Galnt3-201ENSMUST00000028378 3885 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.3
Pcdh1F7BJK1 Itgb5-201ENSMUST00000069345 3056 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
Pcdh1F7BJK1 Med14-201ENSMUST00000076016 2561 ntAPPRIS ALT2 TSL 1 (best) BASIC16.95■□□□□ 0.3
Pcdh1F7BJK1 Nkx6-2-202ENSMUST00000106095 1299 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Pcdh1F7BJK1 Arpp19-206ENSMUST00000168301 599 ntTSL 5 BASIC16.95■□□□□ 0.3
Pcdh1F7BJK1 AC161180.2-201ENSMUST00000222567 1015 ntAPPRIS P1 BASIC16.95■□□□□ 0.3
Pcdh1F7BJK1 Laptm4b-201ENSMUST00000022867 1902 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Pcdh1F7BJK1 Rad1-201ENSMUST00000022856 1514 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Pcdh1F7BJK1 Faxc-201ENSMUST00000029908 2627 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Pcdh1F7BJK1 Blcap-201ENSMUST00000088494 2108 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Pcdh1F7BJK1 Sh3bp1-202ENSMUST00000061239 1917 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
Pcdh1F7BJK1 Sumf1-206ENSMUST00000172188 723 ntTSL 5 BASIC16.94■□□□□ 0.3
Pcdh1F7BJK1 Copz2-201ENSMUST00000018816 930 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Pcdh1F7BJK1 Pacsin3-203ENSMUST00000111349 1993 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Pcdh1F7BJK1 Rchy1-201ENSMUST00000031345 1967 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Pcdh1F7BJK1 Zfp706-201ENSMUST00000078976 4417 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Pcdh1F7BJK1 Gpc3-202ENSMUST00000114857 1880 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
Pcdh1F7BJK1 Gm9828-202ENSMUST00000126622 1446 ntTSL 3 BASIC16.94■□□□□ 0.3
Pcdh1F7BJK1 Igsf9b-201ENSMUST00000115247 2857 ntAPPRIS ALT2 TSL 1 (best) BASIC16.94■□□□□ 0.3
Pcdh1F7BJK1 Gpr162-204ENSMUST00000204667 2855 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Pcdh1F7BJK1 Sebox-202ENSMUST00000125670 1300 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
Pcdh1F7BJK1 Dixdc1-207ENSMUST00000121634 2420 ntTSL 5 BASIC16.94■□□□□ 0.3
Pcdh1F7BJK1 Insig2-201ENSMUST00000003818 2697 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Pcdh1F7BJK1 Tekt5-201ENSMUST00000043415 1803 ntAPPRIS ALT2 TSL 1 (best) BASIC16.93■□□□□ 0.3
Pcdh1F7BJK1 Mpp3-203ENSMUST00000107167 2066 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
Pcdh1F7BJK1 Traf3-203ENSMUST00000117269 6972 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
Pcdh1F7BJK1 Naa30-205ENSMUST00000153488 4446 ntAPPRIS P2 TSL 1 (best) BASIC16.93■□□□□ 0.3
Pcdh1F7BJK1 Ythdc1-202ENSMUST00000119339 3222 ntAPPRIS ALT2 TSL 5 BASIC16.93■□□□□ 0.3
Pcdh1F7BJK1 Ppp2ca-201ENSMUST00000020608 7102 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Pcdh1F7BJK1 BC017158-201ENSMUST00000033044 2627 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Pcdh1F7BJK1 Pard3-219ENSMUST00000162309 5659 ntAPPRIS P3 TSL 1 (best) BASIC16.93■□□□□ 0.3
Pcdh1F7BJK1 Cnn3-201ENSMUST00000029773 2049 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Pcdh1F7BJK1 Dtymk-202ENSMUST00000112890 1055 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
Pcdh1F7BJK1 Prodh-206ENSMUST00000139861 677 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
Pcdh1F7BJK1 Bag1-201ENSMUST00000030125 1295 ntAPPRIS ALT2 TSL 1 (best) BASIC16.93■□□□□ 0.3
Pcdh1F7BJK1 Ostc-201ENSMUST00000043937 1067 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Pcdh1F7BJK1 Kmt5b-201ENSMUST00000005518 1283 ntAPPRIS ALT2 TSL 5 BASIC16.93■□□□□ 0.3
Pcdh1F7BJK1 Rnf44-208ENSMUST00000128257 1689 ntTSL 5 BASIC16.93■□□□□ 0.3
Pcdh1F7BJK1 Krcc1-203ENSMUST00000204436 1687 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Pcdh1F7BJK1 Cldn23-201ENSMUST00000060128 1848 ntAPPRIS P1 BASIC16.93■□□□□ 0.3
Pcdh1F7BJK1 Eml4-203ENSMUST00000112363 5238 ntAPPRIS ALT2 TSL 1 (best) BASIC16.93■□□□□ 0.3
Pcdh1F7BJK1 Adgrv1-211ENSMUST00000146749 1592 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
Pcdh1F7BJK1 Exog-202ENSMUST00000164213 2627 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
Pcdh1F7BJK1 Hirip3-201ENSMUST00000037248 2766 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Pcdh1F7BJK1 Mgll-202ENSMUST00000113581 1308 ntTSL 5 BASIC16.93■□□□□ 0.3
Pcdh1F7BJK1 Tgif1-209ENSMUST00000166395 1714 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
Pcdh1F7BJK1 Fmnl2-201ENSMUST00000049483 5461 ntTSL 5 BASIC16.93■□□□□ 0.3
Pcdh1F7BJK1 Pwwp2b-201ENSMUST00000093993 3057 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
Pcdh1F7BJK1 Nudt11-201ENSMUST00000103007 3036 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Pcdh1F7BJK1 Alg1-201ENSMUST00000049207 1669 ntAPPRIS ALT2 TSL 2 BASIC16.92■□□□□ 0.3
Pcdh1F7BJK1 Gm21949-201ENSMUST00000182006 2369 ntAPPRIS P1 TSL 2 BASIC16.92■□□□□ 0.3
Pcdh1F7BJK1 Gm10941-201ENSMUST00000105408 708 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
Pcdh1F7BJK1 Gemin7-203ENSMUST00000119912 653 ntAPPRIS P1 TSL 3 BASIC16.92■□□□□ 0.3
Pcdh1F7BJK1 Siglec15-201ENSMUST00000170760 1156 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Pcdh1F7BJK1 Lbx2-201ENSMUST00000041265 817 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Pcdh1F7BJK1 3010003L21Rik-201ENSMUST00000047953 1729 ntTSL 5 BASIC16.92■□□□□ 0.3
Pcdh1F7BJK1 AC123834.2-201ENSMUST00000224038 2340 ntBASIC16.92■□□□□ 0.3
Pcdh1F7BJK1 Atxn7-203ENSMUST00000223880 2946 ntAPPRIS P2 BASIC16.92■□□□□ 0.3
Pcdh1F7BJK1 Ikbip-202ENSMUST00000020150 1328 ntAPPRIS P3 TSL 1 (best) BASIC16.92■□□□□ 0.3
Pcdh1F7BJK1 4930412F12Rik-201ENSMUST00000211700 1471 ntBASIC16.92■□□□□ 0.3
Pcdh1F7BJK1 Espn-203ENSMUST00000070018 1618 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
Pcdh1F7BJK1 Eid2b-201ENSMUST00000094651 1751 ntAPPRIS P1 BASIC16.92■□□□□ 0.3
Pcdh1F7BJK1 Frmd3-202ENSMUST00000098006 2205 ntAPPRIS ALT2 TSL 1 (best) BASIC16.92■□□□□ 0.3
Retrieved 100 of 76,532 protein–RNA pairs in 67.8 ms