Protein–RNA interactions for Protein: F6ZNL5

Pcdh11x, Protocadherin 11 X-linked, mousemouse

Predictions only

Length 1,338 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdh11xF6ZNL5 Hgsnat-201ENSMUST00000037609 2694 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
Pcdh11xF6ZNL5 Pgf-204ENSMUST00000223220 2080 ntAPPRIS ALT2 TSL 1 (best) BASIC20.95■□□□□ 0.95
Pcdh11xF6ZNL5 Mdfi-201ENSMUST00000035375 1371 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
Pcdh11xF6ZNL5 Gp5-201ENSMUST00000061190 2196 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
Pcdh11xF6ZNL5 9430060I03Rik-201ENSMUST00000191563 1689 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
Pcdh11xF6ZNL5 C630004M23Rik-201ENSMUST00000194765 1682 ntBASIC20.95■□□□□ 0.94
Pcdh11xF6ZNL5 Zcrb1-208ENSMUST00000162160 850 ntAPPRIS ALT1 TSL 1 (best) BASIC20.95■□□□□ 0.94
Pcdh11xF6ZNL5 0610010K14Rik-202ENSMUST00000021181 779 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
Pcdh11xF6ZNL5 Hes3-202ENSMUST00000218045 962 ntAPPRIS ALT2 TSL 5 BASIC20.95■□□□□ 0.94
Pcdh11xF6ZNL5 Ptrh1-201ENSMUST00000066352 952 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
Pcdh11xF6ZNL5 Tbkbp1-203ENSMUST00000107614 2391 ntAPPRIS ALT2 TSL 5 BASIC20.95■□□□□ 0.94
Pcdh11xF6ZNL5 Neurl4-213ENSMUST00000177476 4952 ntAPPRIS ALT2 TSL 1 (best) BASIC20.95■□□□□ 0.94
Pcdh11xF6ZNL5 Rgs19-202ENSMUST00000108769 1460 ntTSL 2 BASIC20.94■□□□□ 0.94
Pcdh11xF6ZNL5 Qk-201ENSMUST00000042296 6718 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
Pcdh11xF6ZNL5 Hcn4-201ENSMUST00000034889 6118 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
Pcdh11xF6ZNL5 Ntmt1-201ENSMUST00000041830 1387 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
Pcdh11xF6ZNL5 Sigmar1-202ENSMUST00000071561 1547 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
Pcdh11xF6ZNL5 3830408C21Rik-206ENSMUST00000225489 1810 ntBASIC20.94■□□□□ 0.94
Pcdh11xF6ZNL5 Rapgef1-201ENSMUST00000091146 6212 ntAPPRIS ALT2 TSL 1 (best) BASIC20.94■□□□□ 0.94
Pcdh11xF6ZNL5 Nubp1-201ENSMUST00000023146 2121 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
Pcdh11xF6ZNL5 Nkiras2-203ENSMUST00000107376 1727 ntAPPRIS P1 TSL 5 BASIC20.94■□□□□ 0.94
Pcdh11xF6ZNL5 Gm38205-201ENSMUST00000192243 258 ntBASIC20.94■□□□□ 0.94
Pcdh11xF6ZNL5 Ferd3l-201ENSMUST00000061035 886 ntAPPRIS P1 BASIC20.94■□□□□ 0.94
Pcdh11xF6ZNL5 Gm26694-201ENSMUST00000180868 1902 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
Pcdh11xF6ZNL5 Cct4-201ENSMUST00000020562 1634 ntTSL 5 BASIC20.94■□□□□ 0.94
Pcdh11xF6ZNL5 Ogfod2-202ENSMUST00000119269 1474 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
Pcdh11xF6ZNL5 Capzb-204ENSMUST00000102508 1674 ntAPPRIS ALT1 TSL 1 (best) BASIC20.93■□□□□ 0.94
Pcdh11xF6ZNL5 Slc25a10-201ENSMUST00000026899 2023 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
Pcdh11xF6ZNL5 D11Wsu47e-202ENSMUST00000106621 2062 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
Pcdh11xF6ZNL5 Clcc1-203ENSMUST00000106613 3064 ntAPPRIS ALT2 TSL 1 (best) BASIC20.93■□□□□ 0.94
Pcdh11xF6ZNL5 Gm21992-201ENSMUST00000172000 1434 ntAPPRIS P1 TSL 2 BASIC20.93■□□□□ 0.94
Pcdh11xF6ZNL5 Gm21992-206ENSMUST00000179909 1435 ntTSL 5 BASIC20.93■□□□□ 0.94
Pcdh11xF6ZNL5 Smap1-201ENSMUST00000027339 2289 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
Pcdh11xF6ZNL5 Cdk19os-202ENSMUST00000143103 1124 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
Pcdh11xF6ZNL5 Gm27032-201ENSMUST00000183124 1116 ntBASIC20.93■□□□□ 0.94
Pcdh11xF6ZNL5 AC099934.2-201ENSMUST00000196389 70 ntBASIC20.93■□□□□ 0.94
Pcdh11xF6ZNL5 AC156953.1-201ENSMUST00000196953 70 ntBASIC20.93■□□□□ 0.94
Pcdh11xF6ZNL5 AC157822.2-201ENSMUST00000200291 70 ntBASIC20.93■□□□□ 0.94
Pcdh11xF6ZNL5 Cox14-201ENSMUST00000023761 723 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
Pcdh11xF6ZNL5 Cep57-209ENSMUST00000148086 2467 ntAPPRIS ALT2 TSL 1 (best) BASIC20.93■□□□□ 0.94
Pcdh11xF6ZNL5 Cant1-205ENSMUST00000106289 1600 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
Pcdh11xF6ZNL5 Gm10129-202ENSMUST00000193100 1316 ntBASIC20.93■□□□□ 0.94
Pcdh11xF6ZNL5 Slc16a10-201ENSMUST00000092566 5397 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
Pcdh11xF6ZNL5 Nbn-201ENSMUST00000029879 2533 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
Pcdh11xF6ZNL5 Smarcad1-201ENSMUST00000031984 5168 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
Pcdh11xF6ZNL5 Irak1bp1-202ENSMUST00000113245 2158 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
Pcdh11xF6ZNL5 Trmt11-201ENSMUST00000019927 2359 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
Pcdh11xF6ZNL5 Gm20421-201ENSMUST00000153344 672 ntTSL 3 BASIC20.92■□□□□ 0.94
Pcdh11xF6ZNL5 Pianp-204ENSMUST00000160704 1116 ntAPPRIS P2 TSL 1 (best) BASIC20.92■□□□□ 0.94
Pcdh11xF6ZNL5 1700012B09Rik-204ENSMUST00000191047 654 ntAPPRIS ALT2 TSL 3 BASIC20.92■□□□□ 0.94
Pcdh11xF6ZNL5 Lmo1-201ENSMUST00000036992 1282 ntAPPRIS P3 TSL 1 (best) BASIC20.92■□□□□ 0.94
Pcdh11xF6ZNL5 Fbxl5-201ENSMUST00000047857 2858 ntAPPRIS P2 TSL 1 (best) BASIC20.92■□□□□ 0.94
Pcdh11xF6ZNL5 Erlin1-202ENSMUST00000112028 3136 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
Pcdh11xF6ZNL5 Psmd3-201ENSMUST00000017365 2148 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
Pcdh11xF6ZNL5 Slc35a2-203ENSMUST00000115663 1527 ntAPPRIS P4 TSL 2 BASIC20.92■□□□□ 0.94
Pcdh11xF6ZNL5 Tnpo2-207ENSMUST00000211601 2941 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
Pcdh11xF6ZNL5 Rpap3-201ENSMUST00000023104 2260 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
Pcdh11xF6ZNL5 Rapgefl1-202ENSMUST00000107479 4855 ntAPPRIS P1 TSL 5 BASIC20.91■□□□□ 0.94
Pcdh11xF6ZNL5 Zdhhc13-201ENSMUST00000118927 2410 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
Pcdh11xF6ZNL5 Rfc5-202ENSMUST00000111953 772 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
Pcdh11xF6ZNL5 Gm13067-201ENSMUST00000134236 404 ntTSL 5 BASIC20.91■□□□□ 0.94
Pcdh11xF6ZNL5 Wnt16-203ENSMUST00000148639 1168 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
Pcdh11xF6ZNL5 Tmbim6-202ENSMUST00000159209 944 ntAPPRIS P1 TSL 5 BASIC20.91■□□□□ 0.94
Pcdh11xF6ZNL5 Ypel3-201ENSMUST00000038614 973 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
Pcdh11xF6ZNL5 Pdp1-206ENSMUST00000108302 2525 ntTSL 3 BASIC20.91■□□□□ 0.94
Pcdh11xF6ZNL5 Ndfip2-206ENSMUST00000181969 2532 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
Pcdh11xF6ZNL5 Spsb3-203ENSMUST00000117890 1641 ntAPPRIS ALT2 TSL 1 (best) BASIC20.91■□□□□ 0.94
Pcdh11xF6ZNL5 Anapc16-204ENSMUST00000182898 1852 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
Pcdh11xF6ZNL5 Shq1-201ENSMUST00000089245 1638 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
Pcdh11xF6ZNL5 Snx4-201ENSMUST00000023502 2442 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
Pcdh11xF6ZNL5 Znrf3-201ENSMUST00000109867 6311 ntAPPRIS P3 TSL 5 BASIC20.9■□□□□ 0.94
Pcdh11xF6ZNL5 A930001C03Rik-204ENSMUST00000154407 1402 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
Pcdh11xF6ZNL5 Cd37-209ENSMUST00000211373 1428 ntAPPRIS ALT2 TSL 1 (best) BASIC20.9■□□□□ 0.94
Pcdh11xF6ZNL5 Lrrfip1-201ENSMUST00000068116 2050 ntAPPRIS ALT2 TSL 5 BASIC20.9■□□□□ 0.94
Pcdh11xF6ZNL5 Gab1-201ENSMUST00000034150 4870 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
Pcdh11xF6ZNL5 Lgmn-202ENSMUST00000110020 1835 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
Pcdh11xF6ZNL5 Tmbim4-201ENSMUST00000020446 904 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
Pcdh11xF6ZNL5 AC122828.1-201ENSMUST00000220785 489 ntTSL 3 BASIC20.9■□□□□ 0.94
Pcdh11xF6ZNL5 Gm10153-201ENSMUST00000084415 522 ntTSL 5 BASIC20.9■□□□□ 0.94
Pcdh11xF6ZNL5 Lrch3-208ENSMUST00000165616 1875 ntTSL 5 BASIC20.9■□□□□ 0.94
Pcdh11xF6ZNL5 Fiz1-204ENSMUST00000207030 2178 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
Pcdh11xF6ZNL5 Snx20-201ENSMUST00000034087 1699 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
Pcdh11xF6ZNL5 Anks3-201ENSMUST00000023157 2483 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.94
Pcdh11xF6ZNL5 Cox7c-202ENSMUST00000078764 433 ntTSL 2 BASIC20.89■□□□□ 0.93
Pcdh11xF6ZNL5 Src-203ENSMUST00000109529 2020 ntTSL 1 (best) BASIC20.89■□□□□ 0.93
Pcdh11xF6ZNL5 Pcnp-202ENSMUST00000114444 2295 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
Pcdh11xF6ZNL5 H19-202ENSMUST00000136359 2286 ntTSL 1 (best) BASIC20.89■□□□□ 0.93
Pcdh11xF6ZNL5 Gm6627-201ENSMUST00000218299 2386 ntBASIC20.89■□□□□ 0.93
Pcdh11xF6ZNL5 Nr1h3-204ENSMUST00000111356 1955 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
Pcdh11xF6ZNL5 Papola-212ENSMUST00000168186 2436 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
Pcdh11xF6ZNL5 AC164629.5-201ENSMUST00000220387 632 ntBASIC20.88■□□□□ 0.93
Pcdh11xF6ZNL5 Pxk-202ENSMUST00000112689 2840 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
Pcdh11xF6ZNL5 Gm3020-202ENSMUST00000167430 1933 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
Pcdh11xF6ZNL5 Gm10409-201ENSMUST00000170123 1933 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
Pcdh11xF6ZNL5 B4gat1-201ENSMUST00000053705 2035 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
Pcdh11xF6ZNL5 Pgam5-202ENSMUST00000112505 2098 ntAPPRIS ALT1 TSL 1 (best) BASIC20.88■□□□□ 0.93
Pcdh11xF6ZNL5 Zfp385b-204ENSMUST00000111831 2734 ntAPPRIS P3 TSL 1 (best) BASIC20.88■□□□□ 0.93
Pcdh11xF6ZNL5 Rabgap1l-201ENSMUST00000028049 2748 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
Pcdh11xF6ZNL5 Arhgef1-204ENSMUST00000117796 3508 ntAPPRIS ALT2 TSL 1 (best) BASIC20.88■□□□□ 0.93
Pcdh11xF6ZNL5 Tgif1-209ENSMUST00000166395 1714 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
Retrieved 100 of 76,532 protein–RNA pairs in 23.4 ms