Protein–RNA interactions for Protein: E9PY62

Cntnap3, Contactin-associated protein-like 3, mousemouse

Predictions only

Length 1,287 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cntnap3E9PY62 Rap1a-201ENSMUST00000090678 2407 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
Cntnap3E9PY62 Paqr3-201ENSMUST00000069453 1375 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
Cntnap3E9PY62 Arid3c-204ENSMUST00000171251 1751 ntAPPRIS P3 TSL 5 BASIC20.88■□□□□ 0.93
Cntnap3E9PY62 Nsl1-203ENSMUST00000139340 837 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
Cntnap3E9PY62 Fev-202ENSMUST00000159232 928 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
Cntnap3E9PY62 Smim22-201ENSMUST00000178155 429 ntAPPRIS P3 TSL 1 (best) BASIC20.88■□□□□ 0.93
Cntnap3E9PY62 Gm6345-202ENSMUST00000180900 204 ntBASIC20.88■□□□□ 0.93
Cntnap3E9PY62 Elof1-204ENSMUST00000214394 567 ntAPPRIS P1 TSL 2 BASIC20.88■□□□□ 0.93
Cntnap3E9PY62 Ell3-201ENSMUST00000028679 2115 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
Cntnap3E9PY62 Exosc3-201ENSMUST00000030003 1077 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
Cntnap3E9PY62 Timm8a2-201ENSMUST00000045976 913 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
Cntnap3E9PY62 Hist3h2ba-201ENSMUST00000078267 614 ntAPPRIS P1 BASIC20.88■□□□□ 0.93
Cntnap3E9PY62 1700026D11Rik-201ENSMUST00000126910 2033 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
Cntnap3E9PY62 Ttc14-211ENSMUST00000200271 2724 ntAPPRIS ALT2 TSL 1 (best) BASIC20.88■□□□□ 0.93
Cntnap3E9PY62 Irf2bp1-201ENSMUST00000053713 2734 ntAPPRIS P1 BASIC20.88■□□□□ 0.93
Cntnap3E9PY62 Gga1-201ENSMUST00000041587 3034 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
Cntnap3E9PY62 Stard3-201ENSMUST00000018311 2070 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
Cntnap3E9PY62 Clta-202ENSMUST00000107846 1710 ntAPPRIS ALT2 TSL 1 (best) BASIC20.87■□□□□ 0.93
Cntnap3E9PY62 Ghrhr-202ENSMUST00000203241 1328 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
Cntnap3E9PY62 Pigp-202ENSMUST00000113906 745 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
Cntnap3E9PY62 Gm5867-201ENSMUST00000063197 592 ntBASIC20.87■□□□□ 0.93
Cntnap3E9PY62 Nkx2-9-201ENSMUST00000072631 1264 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
Cntnap3E9PY62 Pus1-203ENSMUST00000086643 1868 ntAPPRIS P4 TSL 1 (best) BASIC20.87■□□□□ 0.93
Cntnap3E9PY62 Ewsr1-205ENSMUST00000102930 2174 ntAPPRIS ALT2 TSL 5 BASIC20.87■□□□□ 0.93
Cntnap3E9PY62 Dvl3-201ENSMUST00000003318 2498 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
Cntnap3E9PY62 Morf4l1-202ENSMUST00000169860 1824 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
Cntnap3E9PY62 Ints11-201ENSMUST00000030901 2368 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
Cntnap3E9PY62 3010003L21Rik-201ENSMUST00000047953 1729 ntTSL 5 BASIC20.87■□□□□ 0.93
Cntnap3E9PY62 Picalm-212ENSMUST00000208730 3427 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
Cntnap3E9PY62 Shc4-202ENSMUST00000110477 1988 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
Cntnap3E9PY62 Gorasp2-201ENSMUST00000028509 2238 ntAPPRIS P2 TSL 1 (best) BASIC20.86■□□□□ 0.93
Cntnap3E9PY62 Kcnn2-203ENSMUST00000169783 1625 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
Cntnap3E9PY62 Fam20b-202ENSMUST00000122424 4532 ntAPPRIS P1 TSL 5 BASIC20.86■□□□□ 0.93
Cntnap3E9PY62 Espn-208ENSMUST00000105654 1566 ntTSL 5 BASIC20.86■□□□□ 0.93
Cntnap3E9PY62 Ccdc61-201ENSMUST00000098780 2022 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
Cntnap3E9PY62 Syde2-201ENSMUST00000039517 5495 ntAPPRIS P2 TSL 1 (best) BASIC20.85■□□□□ 0.93
Cntnap3E9PY62 Polg2-201ENSMUST00000021060 1506 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
Cntnap3E9PY62 K230015D01Rik-201ENSMUST00000211969 1516 ntBASIC20.85■□□□□ 0.93
Cntnap3E9PY62 Gm16295-201ENSMUST00000139512 643 ntTSL 3 BASIC20.85■□□□□ 0.93
Cntnap3E9PY62 Spata25-201ENSMUST00000017911 786 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
Cntnap3E9PY62 4930519P11Rik-201ENSMUST00000181369 501 ntAPPRIS P1 BASIC20.85■□□□□ 0.93
Cntnap3E9PY62 Chmp2a-203ENSMUST00000210587 930 ntAPPRIS P1 TSL 3 BASIC20.85■□□□□ 0.93
Cntnap3E9PY62 Gm9803-201ENSMUST00000057649 563 ntAPPRIS P1 BASIC20.85■□□□□ 0.93
Cntnap3E9PY62 0610009B22Rik-201ENSMUST00000007921 813 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
Cntnap3E9PY62 Cnot6-203ENSMUST00000145353 5736 ntAPPRIS P1 TSL 5 BASIC20.85■□□□□ 0.93
Cntnap3E9PY62 Neurl4-202ENSMUST00000108617 4892 ntAPPRIS ALT2 TSL 5 BASIC20.85■□□□□ 0.93
Cntnap3E9PY62 Cadps-204ENSMUST00000177814 5461 ntAPPRIS ALT2 TSL 5 BASIC20.85■□□□□ 0.93
Cntnap3E9PY62 Mcam-201ENSMUST00000034650 2989 ntAPPRIS P2 TSL 1 (best) BASIC20.85■□□□□ 0.93
Cntnap3E9PY62 Hnrnpab-201ENSMUST00000074669 2370 ntAPPRIS P3 TSL 1 (best) BASIC20.85■□□□□ 0.93
Cntnap3E9PY62 Cdx1-201ENSMUST00000025521 1750 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
Cntnap3E9PY62 Ypel1-201ENSMUST00000035682 3322 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
Cntnap3E9PY62 Puf60-202ENSMUST00000100527 1878 ntAPPRIS P4 TSL 1 (best) BASIC20.84■□□□□ 0.93
Cntnap3E9PY62 Slc30a1-201ENSMUST00000044954 5244 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
Cntnap3E9PY62 Snrnp35-202ENSMUST00000111453 1181 ntAPPRIS P1 TSL 2 BASIC20.84■□□□□ 0.93
Cntnap3E9PY62 1810012K08Rik-201ENSMUST00000155199 574 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
Cntnap3E9PY62 Gm21814-202ENSMUST00000203277 873 ntBASIC20.84■□□□□ 0.93
Cntnap3E9PY62 Cib1-207ENSMUST00000206084 772 ntTSL 3 BASIC20.84■□□□□ 0.93
Cntnap3E9PY62 Arhgef4-208ENSMUST00000211073 171 ntBASIC20.84■□□□□ 0.93
Cntnap3E9PY62 AC133598.3-202ENSMUST00000224219 531 ntBASIC20.84■□□□□ 0.93
Cntnap3E9PY62 Atg101-201ENSMUST00000048393 1230 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
Cntnap3E9PY62 Pdlim5-202ENSMUST00000058626 873 ntTSL 5 BASIC20.84■□□□□ 0.93
Cntnap3E9PY62 Cib1-202ENSMUST00000071457 702 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
Cntnap3E9PY62 Runx1-203ENSMUST00000168195 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC20.84■□□□□ 0.93
Cntnap3E9PY62 Barhl1-203ENSMUST00000113849 2102 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
Cntnap3E9PY62 Magi2-201ENSMUST00000088516 4843 ntAPPRIS P2 TSL 5 BASIC20.84■□□□□ 0.93
Cntnap3E9PY62 Gm5913-201ENSMUST00000119397 1399 ntBASIC20.84■□□□□ 0.93
Cntnap3E9PY62 Tcf7l1-202ENSMUST00000114053 1888 ntAPPRIS ALT2 TSL 1 (best) BASIC20.84■□□□□ 0.93
Cntnap3E9PY62 Hnrnpa3-204ENSMUST00000111964 1654 ntAPPRIS P3 TSL 1 (best) BASIC20.83■□□□□ 0.93
Cntnap3E9PY62 Gabbr2-201ENSMUST00000107749 5750 ntAPPRIS P1 TSL 2 BASIC20.83■□□□□ 0.93
Cntnap3E9PY62 Zfp598-201ENSMUST00000047179 3286 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
Cntnap3E9PY62 Rbm38-201ENSMUST00000029014 1768 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
Cntnap3E9PY62 Ndufb11-201ENSMUST00000116621 908 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
Cntnap3E9PY62 Gm31727-201ENSMUST00000210102 360 ntTSL 3 BASIC20.83■□□□□ 0.93
Cntnap3E9PY62 Psenen-201ENSMUST00000043898 708 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
Cntnap3E9PY62 Txnl4a-204ENSMUST00000145963 1756 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
Cntnap3E9PY62 Rpf2-201ENSMUST00000045114 1853 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
Cntnap3E9PY62 Tmem60-201ENSMUST00000115259 1147 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
Cntnap3E9PY62 Banf1-201ENSMUST00000025762 735 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
Cntnap3E9PY62 Uchl1-201ENSMUST00000031131 1177 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
Cntnap3E9PY62 Lce1i-201ENSMUST00000090866 731 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
Cntnap3E9PY62 Gyg-201ENSMUST00000118015 1922 ntAPPRIS ALT2 TSL 1 (best) BASIC20.82■□□□□ 0.92
Cntnap3E9PY62 6430573P05Rik-203ENSMUST00000195547 2457 ntBASIC20.82■□□□□ 0.92
Cntnap3E9PY62 Lrrc1-205ENSMUST00000183873 3121 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
Cntnap3E9PY62 Adgrb1-201ENSMUST00000042035 6228 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
Cntnap3E9PY62 Plk5-201ENSMUST00000039836 2112 ntAPPRIS P3 TSL 2 BASIC20.81■□□□□ 0.92
Cntnap3E9PY62 Ergic3-202ENSMUST00000088650 1349 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
Cntnap3E9PY62 Gm10013-201ENSMUST00000106074 672 ntBASIC20.81■□□□□ 0.92
Cntnap3E9PY62 Nkx2-2-203ENSMUST00000109970 1053 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
Cntnap3E9PY62 Pgam1-ps2-201ENSMUST00000117129 765 ntBASIC20.81■□□□□ 0.92
Cntnap3E9PY62 Gm7860-201ENSMUST00000121190 879 ntBASIC20.81■□□□□ 0.92
Cntnap3E9PY62 Gm37939-201ENSMUST00000192309 447 ntTSL 5 BASIC20.81■□□□□ 0.92
Cntnap3E9PY62 Fgf9-202ENSMUST00000074654 1198 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
Cntnap3E9PY62 Ezh2-203ENSMUST00000114616 2670 ntAPPRIS ALT1 TSL 5 BASIC20.81■□□□□ 0.92
Cntnap3E9PY62 Zranb1-202ENSMUST00000106157 5008 ntAPPRIS P2 TSL 5 BASIC20.81■□□□□ 0.92
Cntnap3E9PY62 Kcnc3-201ENSMUST00000107906 5062 ntAPPRIS ALT2 TSL 1 (best) BASIC20.81■□□□□ 0.92
Cntnap3E9PY62 Car11-201ENSMUST00000003360 1585 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
Cntnap3E9PY62 Yy1-201ENSMUST00000021692 6178 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
Cntnap3E9PY62 Mall-201ENSMUST00000028856 2006 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
Cntnap3E9PY62 Aqp2-201ENSMUST00000023752 1416 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
Cntnap3E9PY62 Gpr160-204ENSMUST00000108261 2213 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
Retrieved 100 of 76,532 protein–RNA pairs in 27.1 ms