Protein–RNA interactions for Protein: E9PVA8

Gcn1, eIF-2-alpha kinase activator GCN1, mousemouse

Known RBP Predictions only

Length 2,671 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gcn1E9PVA8 Rnf149-201ENSMUST00000062525 2492 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Gcn1E9PVA8 P4htm-201ENSMUST00000006853 1841 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Gcn1E9PVA8 Mir6236-201ENSMUST00000184437 123 ntBASIC16.18■□□□□ 0.18
Gcn1E9PVA8 Cldn24-201ENSMUST00000079639 663 ntAPPRIS P1 BASIC16.18■□□□□ 0.18
Gcn1E9PVA8 P3h3-201ENSMUST00000023958 2850 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Gcn1E9PVA8 Tmem97-201ENSMUST00000103242 1375 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Gcn1E9PVA8 Polg2-201ENSMUST00000021060 1506 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Gcn1E9PVA8 Dmap1-201ENSMUST00000102687 1566 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Gcn1E9PVA8 Gm45277-201ENSMUST00000210549 1695 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
Gcn1E9PVA8 Mcub-204ENSMUST00000153506 1005 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
Gcn1E9PVA8 Gm18958-201ENSMUST00000174258 762 ntBASIC16.18■□□□□ 0.18
Gcn1E9PVA8 Timm13-204ENSMUST00000219896 542 ntTSL 3 BASIC16.18■□□□□ 0.18
Gcn1E9PVA8 Gzmd-201ENSMUST00000082093 964 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Gcn1E9PVA8 Mindy2-202ENSMUST00000213380 2521 ntAPPRIS ALT2 TSL 1 (best) BASIC16.17■□□□□ 0.18
Gcn1E9PVA8 Grasp-201ENSMUST00000000543 2013 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Gcn1E9PVA8 Gm13431-203ENSMUST00000147012 388 ntTSL 2 BASIC16.17■□□□□ 0.18
Gcn1E9PVA8 Gm38282-201ENSMUST00000192751 695 ntTSL 5 BASIC16.17■□□□□ 0.18
Gcn1E9PVA8 Mrpl15-205ENSMUST00000146665 1569 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
Gcn1E9PVA8 Smkr-ps-202ENSMUST00000141679 901 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
Gcn1E9PVA8 Dmrta2os-202ENSMUST00000141893 691 ntTSL 3 BASIC16.17■□□□□ 0.18
Gcn1E9PVA8 Gm14964-202ENSMUST00000149574 716 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
Gcn1E9PVA8 Gm26756-201ENSMUST00000181689 1294 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
Gcn1E9PVA8 Impa1-204ENSMUST00000191670 1100 ntTSL 2 BASIC16.17■□□□□ 0.18
Gcn1E9PVA8 Gm34391-201ENSMUST00000203706 907 ntBASIC16.17■□□□□ 0.18
Gcn1E9PVA8 Timm13-203ENSMUST00000218481 471 ntTSL 3 BASIC16.17■□□□□ 0.18
Gcn1E9PVA8 Cldn7-201ENSMUST00000018713 1335 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Gcn1E9PVA8 Hnrnpab-201ENSMUST00000074669 2370 ntAPPRIS P3 TSL 1 (best) BASIC16.17■□□□□ 0.18
Gcn1E9PVA8 Foxp1-225ENSMUST00000177229 1848 ntAPPRIS ALT2 TSL 5 BASIC16.16■□□□□ 0.18
Gcn1E9PVA8 AC159093.1-201ENSMUST00000227779 380 ntBASIC16.16■□□□□ 0.18
Gcn1E9PVA8 Pdlim5-202ENSMUST00000058626 873 ntTSL 5 BASIC16.16■□□□□ 0.18
Gcn1E9PVA8 Kazald1-202ENSMUST00000111948 1625 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Gcn1E9PVA8 Klc1-201ENSMUST00000084941 2504 ntAPPRIS P3 TSL 1 (best) BASIC16.16■□□□□ 0.18
Gcn1E9PVA8 St3gal2-202ENSMUST00000117534 2177 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
Gcn1E9PVA8 Urah-202ENSMUST00000106050 719 ntAPPRIS ALT2 TSL 2 BASIC16.16■□□□□ 0.18
Gcn1E9PVA8 Flg-202ENSMUST00000178008 768 ntAPPRIS ALT2 BASIC16.16■□□□□ 0.18
Gcn1E9PVA8 Flg-205ENSMUST00000179250 765 ntAPPRIS ALT2 BASIC16.16■□□□□ 0.18
Gcn1E9PVA8 Flg-206ENSMUST00000179477 768 ntAPPRIS ALT2 BASIC16.16■□□□□ 0.18
Gcn1E9PVA8 Flg-207ENSMUST00000180293 768 ntAPPRIS ALT2 BASIC16.16■□□□□ 0.18
Gcn1E9PVA8 Arl3-201ENSMUST00000026009 822 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Gcn1E9PVA8 Cdr2-201ENSMUST00000033169 2525 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Gcn1E9PVA8 Homer3-203ENSMUST00000110124 2445 ntAPPRIS ALT1 TSL 5 BASIC16.16■□□□□ 0.18
Gcn1E9PVA8 March11-201ENSMUST00000126304 2146 ntAPPRIS ALT2 TSL 1 (best) BASIC16.16■□□□□ 0.18
Gcn1E9PVA8 Gm15492-201ENSMUST00000156734 606 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
Gcn1E9PVA8 Ino80dos-204ENSMUST00000188602 678 ntTSL 2 BASIC16.15■□□□□ 0.18
Gcn1E9PVA8 Gpatch2-201ENSMUST00000044812 1639 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
Gcn1E9PVA8 Arrdc2-201ENSMUST00000002989 2355 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Gcn1E9PVA8 6330403K07Rik-201ENSMUST00000156068 1494 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
Gcn1E9PVA8 Uap1-201ENSMUST00000027981 2283 ntAPPRIS P3 TSL 1 (best) BASIC16.15■□□□□ 0.18
Gcn1E9PVA8 Wnt11-205ENSMUST00000167303 1792 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Gcn1E9PVA8 Ttc14-206ENSMUST00000196975 1711 ntAPPRIS ALT2 TSL 1 (best) BASIC16.15■□□□□ 0.18
Gcn1E9PVA8 Adrb3-202ENSMUST00000117565 1336 ntAPPRIS ALT2 TSL 1 (best) BASIC16.15■□□□□ 0.18
Gcn1E9PVA8 Gm26661-201ENSMUST00000181025 471 ntAPPRIS P1 BASIC16.15■□□□□ 0.18
Gcn1E9PVA8 Olfr572-203ENSMUST00000215782 1233 ntAPPRIS P1 TSL 5 BASIC16.15■□□□□ 0.18
Gcn1E9PVA8 Pigp-202ENSMUST00000113906 745 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Gcn1E9PVA8 Gm42802-201ENSMUST00000202475 456 ntTSL 2 BASIC16.14■□□□□ 0.17
Gcn1E9PVA8 Nat14-201ENSMUST00000047309 1612 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Gcn1E9PVA8 Rasl11b-201ENSMUST00000051937 1812 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Gcn1E9PVA8 Gm14968-201ENSMUST00000155528 769 ntTSL 3 BASIC16.14■□□□□ 0.17
Gcn1E9PVA8 Trappc6a-201ENSMUST00000002112 785 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Gcn1E9PVA8 Elof1-204ENSMUST00000214394 567 ntAPPRIS P1 TSL 2 BASIC16.14■□□□□ 0.17
Gcn1E9PVA8 1700022H01Rik-201ENSMUST00000219142 387 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
Gcn1E9PVA8 Hyal2-201ENSMUST00000010191 1893 ntAPPRIS P2 TSL 1 (best) BASIC16.14■□□□□ 0.17
Gcn1E9PVA8 Lzic-201ENSMUST00000030842 1817 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Gcn1E9PVA8 Agpat5-201ENSMUST00000033847 2841 ntAPPRIS ALT2 TSL 1 (best) BASIC16.14■□□□□ 0.17
Gcn1E9PVA8 Ankra2-202ENSMUST00000091356 1949 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
Gcn1E9PVA8 Rnf186-201ENSMUST00000116094 1249 ntAPPRIS P1 BASIC16.13■□□□□ 0.17
Gcn1E9PVA8 Gtf3c2-202ENSMUST00000200871 318 ntTSL 3 BASIC16.13■□□□□ 0.17
Gcn1E9PVA8 Tomm22-201ENSMUST00000023062 1031 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Gcn1E9PVA8 Disc1-204ENSMUST00000115885 2408 ntAPPRIS ALT2 TSL 5 BASIC16.13■□□□□ 0.17
Gcn1E9PVA8 Disc1-202ENSMUST00000075730 2408 ntAPPRIS P3 TSL 5 BASIC16.13■□□□□ 0.17
Gcn1E9PVA8 Fgf20-202ENSMUST00000118639 587 ntTSL 3 BASIC16.13■□□□□ 0.17
Gcn1E9PVA8 Psmd13-209ENSMUST00000164681 726 ntTSL 5 BASIC16.13■□□□□ 0.17
Gcn1E9PVA8 Ddah2-204ENSMUST00000174493 1254 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
Gcn1E9PVA8 AC134329.2-201ENSMUST00000217897 428 ntBASIC16.13■□□□□ 0.17
Gcn1E9PVA8 Sh3rf3-202ENSMUST00000135526 1940 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
Gcn1E9PVA8 Phf12-202ENSMUST00000108360 3047 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
Gcn1E9PVA8 Ing2-201ENSMUST00000080353 2812 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Gcn1E9PVA8 Eif2ak4-207ENSMUST00000110877 2134 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
Gcn1E9PVA8 Gm45623-201ENSMUST00000210744 1457 ntAPPRIS P1 BASIC16.13■□□□□ 0.17
Gcn1E9PVA8 Dus1l-209ENSMUST00000167023 1909 ntAPPRIS P2 TSL 1 (best) BASIC16.13■□□□□ 0.17
Gcn1E9PVA8 Dus1l-201ENSMUST00000026151 1930 ntAPPRIS ALT2 TSL 5 BASIC16.13■□□□□ 0.17
Gcn1E9PVA8 Gm7791-201ENSMUST00000219066 539 ntBASIC16.12■□□□□ 0.17
Gcn1E9PVA8 Nsun2-208ENSMUST00000176485 2408 ntAPPRIS ALT2 TSL 5 BASIC16.12■□□□□ 0.17
Gcn1E9PVA8 Prss32-201ENSMUST00000061725 1689 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Gcn1E9PVA8 Fance-202ENSMUST00000114801 1751 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
Gcn1E9PVA8 Tinagl1-203ENSMUST00000105999 1952 ntAPPRIS P2 TSL 1 (best) BASIC16.12■□□□□ 0.17
Gcn1E9PVA8 Kctd14-202ENSMUST00000121987 1210 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
Gcn1E9PVA8 Gm26517-201ENSMUST00000181279 1172 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
Gcn1E9PVA8 Cyb5a-204ENSMUST00000160180 1363 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Gcn1E9PVA8 Gm26796-201ENSMUST00000181092 2276 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
Gcn1E9PVA8 Abhd12-201ENSMUST00000056149 1999 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Gcn1E9PVA8 Nol7-201ENSMUST00000071926 1800 ntAPPRIS P2 TSL 1 (best) BASIC16.12■□□□□ 0.17
Gcn1E9PVA8 Znhit2-201ENSMUST00000162726 1281 ntAPPRIS P1 BASIC16.12■□□□□ 0.17
Gcn1E9PVA8 1700025N23Rik-201ENSMUST00000186189 915 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
Gcn1E9PVA8 Gm43791-201ENSMUST00000202914 468 ntTSL 5 BASIC16.12■□□□□ 0.17
Gcn1E9PVA8 Sapcd2-203ENSMUST00000114293 1600 ntAPPRIS ALT2 TSL 1 (best) BASIC16.11■□□□□ 0.17
Gcn1E9PVA8 Lypla2-201ENSMUST00000067567 1626 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Gcn1E9PVA8 Cacng7-201ENSMUST00000092891 2212 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Gcn1E9PVA8 Spire2-201ENSMUST00000010298 2330 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Gcn1E9PVA8 Begain-203ENSMUST00000190647 2707 ntAPPRIS P2 TSL 1 (best) BASIC16.11■□□□□ 0.17
Retrieved 100 of 76,532 protein–RNA pairs in 17.1 ms