Protein–RNA interactions for Protein: D3Z5T1

Ccdc78, Coiled-coil domain-containing protein 78, mousemouse

Predictions only

Length 437 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc78D3Z5T1 Scn1b-203ENSMUST00000211945 1501 ntAPPRIS P1 TSL 5 BASIC21.19■□□□□ 0.98
Ccdc78D3Z5T1 Adgrv1-211ENSMUST00000146749 1592 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
Ccdc78D3Z5T1 Kis2-201ENSMUST00000133214 1717 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
Ccdc78D3Z5T1 Ildr2-204ENSMUST00000192732 2263 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
Ccdc78D3Z5T1 Krt24-201ENSMUST00000017255 1847 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
Ccdc78D3Z5T1 Cbfb-202ENSMUST00000109392 2891 ntAPPRIS ALT1 TSL 1 (best) BASIC21.19■□□□□ 0.98
Ccdc78D3Z5T1 Sstr1-201ENSMUST00000044299 2014 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
Ccdc78D3Z5T1 Zfp523-202ENSMUST00000073534 2654 ntAPPRIS P1 TSL 5 BASIC21.19■□□□□ 0.98
Ccdc78D3Z5T1 Hmx2-202ENSMUST00000183219 1546 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
Ccdc78D3Z5T1 Fam3c-203ENSMUST00000163963 1617 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
Ccdc78D3Z5T1 Sra1-201ENSMUST00000001415 2061 ntAPPRIS P4 TSL 5 BASIC21.18■□□□□ 0.98
Ccdc78D3Z5T1 Romo1-202ENSMUST00000109597 550 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
Ccdc78D3Z5T1 Trmt61a-202ENSMUST00000168338 2131 ntAPPRIS P1 TSL 5 BASIC21.18■□□□□ 0.98
Ccdc78D3Z5T1 Fxyd1-215ENSMUST00000206474 572 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
Ccdc78D3Z5T1 Stim2-201ENSMUST00000117661 4934 ntAPPRIS P2 TSL 1 (best) BASIC21.18■□□□□ 0.98
Ccdc78D3Z5T1 9430060I03Rik-201ENSMUST00000191563 1689 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
Ccdc78D3Z5T1 Nhlh1-201ENSMUST00000059794 2464 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
Ccdc78D3Z5T1 Gm44210-201ENSMUST00000205253 713 ntTSL 3 BASIC21.17■□□□□ 0.98
Ccdc78D3Z5T1 Htatip2-202ENSMUST00000207895 1338 ntAPPRIS ALT2 TSL 1 (best) BASIC21.17■□□□□ 0.98
Ccdc78D3Z5T1 Rchy1-204ENSMUST00000169948 1417 ntTSL 3 BASIC21.17■□□□□ 0.98
Ccdc78D3Z5T1 Nrm-201ENSMUST00000074259 1466 ntAPPRIS P2 TSL 1 (best) BASIC21.17■□□□□ 0.98
Ccdc78D3Z5T1 Ssbp2-202ENSMUST00000042122 1633 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
Ccdc78D3Z5T1 Hoxa10-202ENSMUST00000125581 2565 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
Ccdc78D3Z5T1 Mylip-201ENSMUST00000038275 3065 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
Ccdc78D3Z5T1 Znhit6-201ENSMUST00000098534 2339 ntAPPRIS P3 TSL 1 (best) BASIC21.16■□□□□ 0.98
Ccdc78D3Z5T1 Cfap36-201ENSMUST00000020754 1664 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
Ccdc78D3Z5T1 Sptssa-201ENSMUST00000056228 1346 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
Ccdc78D3Z5T1 Tmem42-202ENSMUST00000213514 631 ntTSL 3 BASIC21.16■□□□□ 0.98
Ccdc78D3Z5T1 Gja3-201ENSMUST00000061614 2766 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
Ccdc78D3Z5T1 Slc35d3-201ENSMUST00000059805 2630 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
Ccdc78D3Z5T1 Tcp11-201ENSMUST00000042692 1984 ntAPPRIS P3 TSL 1 (best) BASIC21.16■□□□□ 0.98
Ccdc78D3Z5T1 Adap2-201ENSMUST00000021050 1785 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
Ccdc78D3Z5T1 Lhx2-203ENSMUST00000143783 1696 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
Ccdc78D3Z5T1 D16Ertd472e-202ENSMUST00000114219 1576 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
Ccdc78D3Z5T1 Psen2-202ENSMUST00000111104 1475 ntAPPRIS ALT1 TSL 1 (best) BASIC21.15■□□□□ 0.98
Ccdc78D3Z5T1 Amdhd1-201ENSMUST00000016034 2421 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
Ccdc78D3Z5T1 Zfp637-201ENSMUST00000112858 650 ntTSL 2 BASIC21.15■□□□□ 0.98
Ccdc78D3Z5T1 Zfp637-203ENSMUST00000112860 1231 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
Ccdc78D3Z5T1 Gm26971-201ENSMUST00000182423 1072 ntBASIC21.15■□□□□ 0.98
Ccdc78D3Z5T1 Gm46218-201ENSMUST00000215448 801 ntTSL 5 BASIC21.15■□□□□ 0.98
Ccdc78D3Z5T1 Ddost-201ENSMUST00000030538 2120 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
Ccdc78D3Z5T1 Pou3f1-201ENSMUST00000053491 3849 ntAPPRIS P1 BASIC21.15■□□□□ 0.98
Ccdc78D3Z5T1 Rpl21-203ENSMUST00000099272 1067 ntAPPRIS P1 TSL 3 BASIC21.15■□□□□ 0.98
Ccdc78D3Z5T1 Klhdc3-202ENSMUST00000165007 1973 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
Ccdc78D3Z5T1 Tmem132b-201ENSMUST00000031446 7995 ntAPPRIS P1 TSL 5 BASIC21.15■□□□□ 0.98
Ccdc78D3Z5T1 Lgmn-202ENSMUST00000110020 1835 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
Ccdc78D3Z5T1 Psmd3-201ENSMUST00000017365 2148 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.98
Ccdc78D3Z5T1 Trp73-204ENSMUST00000105644 5042 ntAPPRIS P3 TSL 1 (best) BASIC21.14■□□□□ 0.98
Ccdc78D3Z5T1 D5Ertd579e-204ENSMUST00000140653 2014 ntTSL 1 (best) BASIC21.14■□□□□ 0.98
Ccdc78D3Z5T1 Hexa-201ENSMUST00000026262 1996 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.98
Ccdc78D3Z5T1 H2afx-201ENSMUST00000052686 1384 ntAPPRIS P1 BASIC21.14■□□□□ 0.98
Ccdc78D3Z5T1 Kcnc3-207ENSMUST00000209177 2960 ntAPPRIS ALT2 TSL 5 BASIC21.14■□□□□ 0.97
Ccdc78D3Z5T1 1700003N22Rik-201ENSMUST00000194834 808 ntBASIC21.14■□□□□ 0.97
Ccdc78D3Z5T1 Uqcc2-201ENSMUST00000025045 500 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
Ccdc78D3Z5T1 Cldn3-201ENSMUST00000094245 1259 ntAPPRIS P1 BASIC21.14■□□□□ 0.97
Ccdc78D3Z5T1 Slc22a23-201ENSMUST00000040336 6251 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
Ccdc78D3Z5T1 Kl-201ENSMUST00000078856 5118 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
Ccdc78D3Z5T1 Tmem263-201ENSMUST00000095383 3616 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
Ccdc78D3Z5T1 Vav3-201ENSMUST00000046864 5019 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
Ccdc78D3Z5T1 Gm3667-201ENSMUST00000171906 2053 ntAPPRIS P1 TSL 5 BASIC21.14■□□□□ 0.97
Ccdc78D3Z5T1 AC131586.2-201ENSMUST00000228370 1512 ntBASIC21.14■□□□□ 0.97
Ccdc78D3Z5T1 Rin3-202ENSMUST00000101114 2394 ntTSL 1 (best) BASIC21.14■□□□□ 0.97
Ccdc78D3Z5T1 Whamm-201ENSMUST00000165460 3069 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
Ccdc78D3Z5T1 Dact3-201ENSMUST00000108493 2989 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
Ccdc78D3Z5T1 Rnpep-201ENSMUST00000074357 2171 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
Ccdc78D3Z5T1 Gm26837-201ENSMUST00000180821 2110 ntTSL 5 BASIC21.13■□□□□ 0.97
Ccdc78D3Z5T1 Ascl4-202ENSMUST00000170396 2016 ntAPPRIS P1 BASIC21.13■□□□□ 0.97
Ccdc78D3Z5T1 Gm13148-201ENSMUST00000118892 745 ntBASIC21.13■□□□□ 0.97
Ccdc78D3Z5T1 Tcap-201ENSMUST00000008021 948 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
Ccdc78D3Z5T1 Cdo1-201ENSMUST00000035804 1530 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
Ccdc78D3Z5T1 Gas2l1-203ENSMUST00000109895 2530 ntAPPRIS P3 TSL 1 (best) BASIC21.13■□□□□ 0.97
Ccdc78D3Z5T1 Pias2-202ENSMUST00000114777 4968 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
Ccdc78D3Z5T1 Capzb-203ENSMUST00000102507 1702 ntAPPRIS P4 TSL 1 (best) BASIC21.12■□□□□ 0.97
Ccdc78D3Z5T1 Sirt1-201ENSMUST00000020257 3905 ntAPPRIS P3 TSL 1 (best) BASIC21.12■□□□□ 0.97
Ccdc78D3Z5T1 Stxbp3-202ENSMUST00000106596 553 ntTSL 2 BASIC21.12■□□□□ 0.97
Ccdc78D3Z5T1 Clta-201ENSMUST00000107845 1031 ntAPPRIS ALT2 TSL 2 BASIC21.12■□□□□ 0.97
Ccdc78D3Z5T1 AC167978.1-201ENSMUST00000182488 456 ntTSL 3 BASIC21.12■□□□□ 0.97
Ccdc78D3Z5T1 Ccdc85c-202ENSMUST00000222310 4298 ntAPPRIS P2 TSL 5 BASIC21.12■□□□□ 0.97
Ccdc78D3Z5T1 Adamts18-201ENSMUST00000093113 5642 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
Ccdc78D3Z5T1 Eif2b4-203ENSMUST00000166769 1878 ntTSL 5 BASIC21.11■□□□□ 0.97
Ccdc78D3Z5T1 Hcn2-201ENSMUST00000020581 3089 ntAPPRIS P1 TSL 5 BASIC21.11■□□□□ 0.97
Ccdc78D3Z5T1 Gm43545-201ENSMUST00000196765 2779 ntBASIC21.11■□□□□ 0.97
Ccdc78D3Z5T1 Tuba3a-201ENSMUST00000088246 1509 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
Ccdc78D3Z5T1 Kndc1-202ENSMUST00000121839 2210 ntTSL 2 BASIC21.11■□□□□ 0.97
Ccdc78D3Z5T1 2610528J11Rik-202ENSMUST00000106367 736 ntAPPRIS P1 TSL 2 BASIC21.11■□□□□ 0.97
Ccdc78D3Z5T1 3110082J24Rik-201ENSMUST00000127749 327 ntAPPRIS P1 TSL 5 BASIC21.11■□□□□ 0.97
Ccdc78D3Z5T1 Ptbp3-204ENSMUST00000140925 606 ntTSL 3 BASIC21.11■□□□□ 0.97
Ccdc78D3Z5T1 2300009A05Rik-201ENSMUST00000168665 595 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
Ccdc78D3Z5T1 A230065N10Rik-201ENSMUST00000172178 1028 ntBASIC21.11■□□□□ 0.97
Ccdc78D3Z5T1 Cox4i1-201ENSMUST00000034276 745 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
Ccdc78D3Z5T1 A930018P22Rik-201ENSMUST00000040374 822 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
Ccdc78D3Z5T1 Gpc3-202ENSMUST00000114857 1880 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
Ccdc78D3Z5T1 Gm30003-201ENSMUST00000200700 1433 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
Ccdc78D3Z5T1 Cd37-209ENSMUST00000211373 1428 ntAPPRIS ALT2 TSL 1 (best) BASIC21.11■□□□□ 0.97
Ccdc78D3Z5T1 Spg7-211ENSMUST00000153285 2481 ntAPPRIS ALT2 TSL 5 BASIC21.11■□□□□ 0.97
Ccdc78D3Z5T1 Plin1-202ENSMUST00000178257 1841 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
Ccdc78D3Z5T1 1810055G02Rik-201ENSMUST00000039048 1882 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
Ccdc78D3Z5T1 Etv2-201ENSMUST00000108147 1048 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
Ccdc78D3Z5T1 Mgll-203ENSMUST00000113582 1034 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
Ccdc78D3Z5T1 Smim27-201ENSMUST00000129758 1044 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
Retrieved 100 of 76,532 protein–RNA pairs in 40.5 ms