Protein–RNA interactions for Protein: D3YU81

Rfx8, DNA-binding protein RFX8, mousemouse

Predictions only

Length 596 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rfx8D3YU81 Hnrnpd-211ENSMUST00000172361 6811 ntAPPRIS P4 TSL 1 (best) BASIC19.99■□□□□ 0.79
Rfx8D3YU81 Fgfr1-215ENSMUST00000179592 5041 ntTSL 5 BASIC19.99■□□□□ 0.79
Rfx8D3YU81 D16Ertd472e-202ENSMUST00000114219 1576 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
Rfx8D3YU81 Gm28523-201ENSMUST00000190040 1588 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
Rfx8D3YU81 Trim72-201ENSMUST00000081042 1755 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
Rfx8D3YU81 Tex30-212ENSMUST00000152239 1046 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
Rfx8D3YU81 Lhx1-204ENSMUST00000184646 1201 ntTSL 5 BASIC19.98■□□□□ 0.79
Rfx8D3YU81 Vps26a-201ENSMUST00000092473 2712 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
Rfx8D3YU81 Spg7-209ENSMUST00000149248 2896 ntAPPRIS P2 TSL 1 (best) BASIC19.98■□□□□ 0.79
Rfx8D3YU81 Fam49b-207ENSMUST00000228226 1896 ntAPPRIS P1 BASIC19.98■□□□□ 0.79
Rfx8D3YU81 Iars2-203ENSMUST00000110975 2801 ntTSL 5 BASIC19.98■□□□□ 0.79
Rfx8D3YU81 Sphk1-203ENSMUST00000100201 1800 ntAPPRIS ALT2 TSL 1 (best) BASIC19.97■□□□□ 0.79
Rfx8D3YU81 AC126028.2-201ENSMUST00000228100 1833 ntBASIC19.97■□□□□ 0.79
Rfx8D3YU81 Jmjd7-201ENSMUST00000044675 1373 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
Rfx8D3YU81 Clcn4-206ENSMUST00000210594 2539 ntAPPRIS ALT2 TSL 5 BASIC19.97■□□□□ 0.79
Rfx8D3YU81 Gm8495-201ENSMUST00000188740 694 ntBASIC19.97■□□□□ 0.79
Rfx8D3YU81 Alg9-201ENSMUST00000034561 2873 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
Rfx8D3YU81 Sfrp5-201ENSMUST00000018966 1900 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
Rfx8D3YU81 Zyg11a-202ENSMUST00000106690 2421 ntAPPRIS ALT2 TSL 5 BASIC19.97■□□□□ 0.79
Rfx8D3YU81 Smox-202ENSMUST00000110179 1320 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
Rfx8D3YU81 Capzb-204ENSMUST00000102508 1674 ntAPPRIS ALT1 TSL 1 (best) BASIC19.97■□□□□ 0.79
Rfx8D3YU81 Rapgef1-203ENSMUST00000102872 6402 ntAPPRIS P3 TSL 1 (best) BASIC19.97■□□□□ 0.79
Rfx8D3YU81 Ppp2r1b-209ENSMUST00000176349 1890 ntAPPRIS ALT2 TSL 5 BASIC19.96■□□□□ 0.79
Rfx8D3YU81 Cpeb3-202ENSMUST00000123727 2411 ntAPPRIS ALT2 TSL 1 (best) BASIC19.96■□□□□ 0.79
Rfx8D3YU81 Nsmf-206ENSMUST00000114388 2781 ntAPPRIS ALT2 TSL 1 (best) BASIC19.96■□□□□ 0.79
Rfx8D3YU81 Vim-206ENSMUST00000193675 1777 ntAPPRIS ALT2 TSL 5 BASIC19.96■□□□□ 0.79
Rfx8D3YU81 Nfix-201ENSMUST00000076715 1403 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
Rfx8D3YU81 Klhdc3-202ENSMUST00000165007 1973 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
Rfx8D3YU81 Gon7-202ENSMUST00000179263 525 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
Rfx8D3YU81 Hist1h2ag-201ENSMUST00000091741 485 ntAPPRIS P1 BASIC19.96■□□□□ 0.79
Rfx8D3YU81 Dnaja4-202ENSMUST00000120452 1827 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
Rfx8D3YU81 Gls2-201ENSMUST00000044776 2573 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
Rfx8D3YU81 Slc39a5-202ENSMUST00000167859 2025 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
Rfx8D3YU81 Ascl4-202ENSMUST00000170396 2016 ntAPPRIS P1 BASIC19.96■□□□□ 0.79
Rfx8D3YU81 Gdf15-202ENSMUST00000110103 1380 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.79
Rfx8D3YU81 Tcp11-201ENSMUST00000042692 1984 ntAPPRIS P3 TSL 1 (best) BASIC19.95■□□□□ 0.78
Rfx8D3YU81 Dap3-201ENSMUST00000090938 4760 ntAPPRIS P2 TSL 1 (best) BASIC19.95■□□□□ 0.78
Rfx8D3YU81 Tifa-201ENSMUST00000054483 2245 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
Rfx8D3YU81 Ciapin1-201ENSMUST00000034233 1807 ntAPPRIS P1 TSL 5 BASIC19.95■□□□□ 0.78
Rfx8D3YU81 Reep4-203ENSMUST00000226563 1444 ntBASIC19.95■□□□□ 0.78
Rfx8D3YU81 Gm13234-201ENSMUST00000120010 747 ntBASIC19.95■□□□□ 0.78
Rfx8D3YU81 1810059C17Rik-201ENSMUST00000125173 487 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
Rfx8D3YU81 Msantd1-203ENSMUST00000202205 744 ntTSL 2 BASIC19.95■□□□□ 0.78
Rfx8D3YU81 Qpct-201ENSMUST00000040789 1924 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
Rfx8D3YU81 Tmem11-203ENSMUST00000168218 1511 ntTSL 2 BASIC19.95■□□□□ 0.78
Rfx8D3YU81 Olfr94-201ENSMUST00000055324 1304 ntAPPRIS P2 BASIC19.95■□□□□ 0.78
Rfx8D3YU81 Eif4h-205ENSMUST00000202622 2726 ntAPPRIS P3 TSL 1 (best) BASIC19.95■□□□□ 0.78
Rfx8D3YU81 Ildr2-204ENSMUST00000192732 2263 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
Rfx8D3YU81 Gm43231-201ENSMUST00000202960 2258 ntBASIC19.95■□□□□ 0.78
Rfx8D3YU81 Sept7-201ENSMUST00000115272 2533 ntAPPRIS ALT1 TSL 5 BASIC19.95■□□□□ 0.78
Rfx8D3YU81 Pcnp-202ENSMUST00000114444 2295 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
Rfx8D3YU81 Eif2b4-212ENSMUST00000202758 1767 ntTSL 5 BASIC19.94■□□□□ 0.78
Rfx8D3YU81 Gm13067-201ENSMUST00000134236 404 ntTSL 5 BASIC19.94■□□□□ 0.78
Rfx8D3YU81 Grifin-201ENSMUST00000042993 613 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
Rfx8D3YU81 Tesmin-201ENSMUST00000025840 2234 ntAPPRIS P3 TSL 1 (best) BASIC19.94■□□□□ 0.78
Rfx8D3YU81 C230096K16Rik-201ENSMUST00000198074 1722 ntBASIC19.93■□□□□ 0.78
Rfx8D3YU81 Dll3-201ENSMUST00000108315 2618 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
Rfx8D3YU81 Phf14-201ENSMUST00000090632 3985 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
Rfx8D3YU81 4930444P10Rik-203ENSMUST00000151004 1001 ntAPPRIS P2 TSL 3 BASIC19.93■□□□□ 0.78
Rfx8D3YU81 Gm38205-201ENSMUST00000192243 258 ntBASIC19.93■□□□□ 0.78
Rfx8D3YU81 Spsb3-203ENSMUST00000117890 1641 ntAPPRIS ALT2 TSL 1 (best) BASIC19.93■□□□□ 0.78
Rfx8D3YU81 Arpc5-202ENSMUST00000097536 1737 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
Rfx8D3YU81 Sra1-201ENSMUST00000001415 2061 ntAPPRIS P4 TSL 5 BASIC19.93■□□□□ 0.78
Rfx8D3YU81 Tmtc1-201ENSMUST00000060095 8383 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
Rfx8D3YU81 Gm38165-201ENSMUST00000191654 486 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
Rfx8D3YU81 Gm42642-201ENSMUST00000200683 355 ntBASIC19.92■□□□□ 0.78
Rfx8D3YU81 Emc9-201ENSMUST00000022828 855 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
Rfx8D3YU81 Gar1-201ENSMUST00000029643 1271 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
Rfx8D3YU81 Gpr3-201ENSMUST00000052090 1116 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
Rfx8D3YU81 Hikeshi-201ENSMUST00000075010 715 ntTSL 3 BASIC19.92■□□□□ 0.78
Rfx8D3YU81 Klhl25-203ENSMUST00000205612 1343 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
Rfx8D3YU81 Csnk1a1-210ENSMUST00000170862 2259 ntAPPRIS ALT1 TSL 5 BASIC19.92■□□□□ 0.78
Rfx8D3YU81 Cd82-201ENSMUST00000028644 1824 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
Rfx8D3YU81 Thoc3-201ENSMUST00000026990 2335 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
Rfx8D3YU81 Slc11a1-211ENSMUST00000187516 1893 ntAPPRIS ALT2 TSL 5 BASIC19.92■□□□□ 0.78
Rfx8D3YU81 Polg2-201ENSMUST00000021060 1506 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
Rfx8D3YU81 Purb-201ENSMUST00000179343 8319 ntAPPRIS P1 BASIC19.91■□□□□ 0.78
Rfx8D3YU81 Gm18671-201ENSMUST00000214826 683 ntBASIC19.91■□□□□ 0.78
Rfx8D3YU81 Dxo-211ENSMUST00000180043 1447 ntAPPRIS P1 TSL 5 BASIC19.91■□□□□ 0.78
Rfx8D3YU81 Ubp1-201ENSMUST00000009885 3742 ntAPPRIS ALT1 TSL 5 BASIC19.91■□□□□ 0.78
Rfx8D3YU81 A530010L16Rik-201ENSMUST00000212007 2336 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
Rfx8D3YU81 Tmem44-204ENSMUST00000140402 2405 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
Rfx8D3YU81 Metap1-201ENSMUST00000029804 2686 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
Rfx8D3YU81 Trim72-202ENSMUST00000106248 2134 ntAPPRIS P1 TSL 5 BASIC19.9■□□□□ 0.78
Rfx8D3YU81 Gnpda1-201ENSMUST00000063814 2289 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
Rfx8D3YU81 Cbln2-202ENSMUST00000122079 2549 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
Rfx8D3YU81 Cdk19os-202ENSMUST00000143103 1124 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
Rfx8D3YU81 Gm16192-201ENSMUST00000148357 937 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
Rfx8D3YU81 Wnt16-203ENSMUST00000148639 1168 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
Rfx8D3YU81 H2-Ab1-201ENSMUST00000040828 1211 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
Rfx8D3YU81 Lbx2-201ENSMUST00000041265 817 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
Rfx8D3YU81 Atf6b-201ENSMUST00000015605 2566 ntAPPRIS P2 TSL 1 (best) BASIC19.9■□□□□ 0.78
Rfx8D3YU81 Khk-204ENSMUST00000201621 1583 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
Rfx8D3YU81 1810055G02Rik-201ENSMUST00000039048 1882 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
Rfx8D3YU81 Pqlc3-201ENSMUST00000054536 1928 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
Rfx8D3YU81 Chd3os-201ENSMUST00000129321 2081 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
Rfx8D3YU81 Sh2b3-203ENSMUST00000118580 2393 ntAPPRIS ALT2 TSL 2 BASIC19.9■□□□□ 0.78
Rfx8D3YU81 Zfp385b-204ENSMUST00000111831 2734 ntAPPRIS P3 TSL 1 (best) BASIC19.89■□□□□ 0.78
Rfx8D3YU81 Fbxl5-204ENSMUST00000119523 2801 ntTSL 5 BASIC19.89■□□□□ 0.78
Rfx8D3YU81 Smap2-201ENSMUST00000043200 2905 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.78
Retrieved 100 of 76,532 protein–RNA pairs in 25.4 ms