Protein–RNA interactions for Protein: B1AVK5

Col4a6, Collagen, type IV, alpha 6, mousemouse

Predictions only

Length 1,691 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col4a6B1AVK5 Gm2788-202ENSMUST00000147173 1390 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
Col4a6B1AVK5 Sdf4-204ENSMUST00000105579 1670 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Col4a6B1AVK5 Lsr-205ENSMUST00000205961 2021 ntAPPRIS P3 TSL 1 (best) BASIC19.75■□□□□ 0.75
Col4a6B1AVK5 Mcmbp-202ENSMUST00000119081 2347 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
Col4a6B1AVK5 Aqp5-201ENSMUST00000088200 1376 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Col4a6B1AVK5 Marc1-202ENSMUST00000110992 2152 ntAPPRIS ALT2 TSL 5 BASIC19.74■□□□□ 0.75
Col4a6B1AVK5 Gm16127-201ENSMUST00000131619 234 ntTSL 5 BASIC19.74■□□□□ 0.75
Col4a6B1AVK5 Gm12979-201ENSMUST00000145488 405 ntTSL 2 BASIC19.74■□□□□ 0.75
Col4a6B1AVK5 Alkbh1-212ENSMUST00000185301 408 ntBASIC19.74■□□□□ 0.75
Col4a6B1AVK5 Gpr162-201ENSMUST00000046893 2676 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Col4a6B1AVK5 K230015D01Rik-201ENSMUST00000211969 1516 ntBASIC19.74■□□□□ 0.75
Col4a6B1AVK5 Fbxo44-201ENSMUST00000057907 1829 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Col4a6B1AVK5 Tbx3os2-201ENSMUST00000135385 1345 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
Col4a6B1AVK5 Srsf12-201ENSMUST00000067864 2939 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Col4a6B1AVK5 Gfi1-202ENSMUST00000065478 2639 ntAPPRIS ALT2 TSL 1 (best) BASIC19.73■□□□□ 0.75
Col4a6B1AVK5 Sae1-201ENSMUST00000094815 1875 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Col4a6B1AVK5 D16Ertd472e-202ENSMUST00000114219 1576 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Col4a6B1AVK5 Cfl1-201ENSMUST00000116560 1148 ntTSL 5 BASIC19.73■□□□□ 0.75
Col4a6B1AVK5 U2af1-201ENSMUST00000014684 907 ntAPPRIS P3 TSL 1 (best) BASIC19.73■□□□□ 0.75
Col4a6B1AVK5 U2af1-202ENSMUST00000166526 907 ntAPPRIS ALT2 TSL 2 BASIC19.73■□□□□ 0.75
Col4a6B1AVK5 Calu-208ENSMUST00000173694 611 ntTSL 5 BASIC19.73■□□□□ 0.75
Col4a6B1AVK5 Grp-201ENSMUST00000025395 862 ntAPPRIS P2 TSL 1 (best) BASIC19.73■□□□□ 0.75
Col4a6B1AVK5 Id1-201ENSMUST00000038368 934 ntAPPRIS P2 TSL 1 (best) BASIC19.73■□□□□ 0.75
Col4a6B1AVK5 Anks3-201ENSMUST00000023157 2483 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Col4a6B1AVK5 Nfe2-210ENSMUST00000156927 1608 ntAPPRIS P1 TSL 5 BASIC19.73■□□□□ 0.75
Col4a6B1AVK5 Ghrhr-202ENSMUST00000203241 1328 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
Col4a6B1AVK5 Stard3-201ENSMUST00000018311 2070 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Col4a6B1AVK5 Ppp3ca-201ENSMUST00000056758 2194 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Col4a6B1AVK5 Clta-203ENSMUST00000107847 1121 ntTSL 5 BASIC19.72■□□□□ 0.75
Col4a6B1AVK5 2700033N17Rik-201ENSMUST00000140185 721 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
Col4a6B1AVK5 Nsfl1c-203ENSMUST00000103160 1369 ntTSL 5 BASIC19.72■□□□□ 0.75
Col4a6B1AVK5 Etv4-202ENSMUST00000107176 2377 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
Col4a6B1AVK5 March11-203ENSMUST00000152841 1365 ntAPPRIS ALT2 TSL 1 (best) BASIC19.72■□□□□ 0.75
Col4a6B1AVK5 Pink1-201ENSMUST00000030536 2375 ntAPPRIS P2 TSL 1 (best) BASIC19.72■□□□□ 0.75
Col4a6B1AVK5 Vstm2b-203ENSMUST00000205845 1455 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Col4a6B1AVK5 Cfap206-202ENSMUST00000108136 1688 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
Col4a6B1AVK5 Uqcrc1-201ENSMUST00000026743 1653 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Col4a6B1AVK5 Zfp821-206ENSMUST00000212964 2033 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
Col4a6B1AVK5 6030419C18Rik-201ENSMUST00000085658 2139 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Col4a6B1AVK5 6430573P05Rik-203ENSMUST00000195547 2457 ntBASIC19.72■□□□□ 0.75
Col4a6B1AVK5 Eefsec-206ENSMUST00000205179 2208 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
Col4a6B1AVK5 Gnas-205ENSMUST00000109083 730 ntTSL 2 BASIC19.71■□□□□ 0.75
Col4a6B1AVK5 Gm15378-201ENSMUST00000121894 207 ntBASIC19.71■□□□□ 0.75
Col4a6B1AVK5 AC175538.1-201ENSMUST00000225343 1269 ntBASIC19.71■□□□□ 0.75
Col4a6B1AVK5 Odf1-201ENSMUST00000081966 1105 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Col4a6B1AVK5 Dnpep-204ENSMUST00000185797 2510 ntAPPRIS ALT2 TSL 1 (best) BASIC19.71■□□□□ 0.75
Col4a6B1AVK5 Celf6-201ENSMUST00000034840 2765 ntAPPRIS P2 TSL 1 (best) BASIC19.71■□□□□ 0.75
Col4a6B1AVK5 Spock1-201ENSMUST00000172326 1320 ntAPPRIS P3 TSL 5 BASIC19.71■□□□□ 0.75
Col4a6B1AVK5 Gpc3-202ENSMUST00000114857 1880 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
Col4a6B1AVK5 Pigt-202ENSMUST00000117066 1712 ntAPPRIS ALT2 TSL 1 (best) BASIC19.71■□□□□ 0.75
Col4a6B1AVK5 Tlcd1-203ENSMUST00000108338 714 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
Col4a6B1AVK5 Gm11927-201ENSMUST00000118472 759 ntBASIC19.71■□□□□ 0.75
Col4a6B1AVK5 2210408F21Rik-213ENSMUST00000153057 652 ntTSL 3 BASIC19.71■□□□□ 0.75
Col4a6B1AVK5 Cldn14-205ENSMUST00000177648 1266 ntAPPRIS P1 TSL 2 BASIC19.71■□□□□ 0.75
Col4a6B1AVK5 Pomc-204ENSMUST00000219543 1043 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Col4a6B1AVK5 Raph1-202ENSMUST00000090293 2409 ntAPPRIS ALT2 TSL 5 BASIC19.71■□□□□ 0.75
Col4a6B1AVK5 Atp6v1b1-206ENSMUST00000206911 1591 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
Col4a6B1AVK5 Smox-209ENSMUST00000110189 1919 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
Col4a6B1AVK5 Clasp2-211ENSMUST00000216817 2234 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
Col4a6B1AVK5 Zfp523-201ENSMUST00000002318 2710 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Col4a6B1AVK5 Anapc16-204ENSMUST00000182898 1852 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Col4a6B1AVK5 Gm20403-201ENSMUST00000173803 372 ntAPPRIS P1 BASIC19.7■□□□□ 0.74
Col4a6B1AVK5 Bmyc-201ENSMUST00000061483 983 ntAPPRIS P1 BASIC19.7■□□□□ 0.74
Col4a6B1AVK5 Myoz1-201ENSMUST00000090469 1289 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Col4a6B1AVK5 Npr3-205ENSMUST00000228603 2437 ntAPPRIS ALT2 BASIC19.7■□□□□ 0.74
Col4a6B1AVK5 Acot7-201ENSMUST00000030779 1425 ntAPPRIS ALT2 TSL 1 (best) BASIC19.7■□□□□ 0.74
Col4a6B1AVK5 Bola3-207ENSMUST00000136501 2312 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Col4a6B1AVK5 Gbx2-201ENSMUST00000036954 2135 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Col4a6B1AVK5 Gm16759-201ENSMUST00000126238 1393 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
Col4a6B1AVK5 Gm5540-201ENSMUST00000131852 1848 ntBASIC19.69■□□□□ 0.74
Col4a6B1AVK5 Zpbp2-205ENSMUST00000107513 1240 ntAPPRIS ALT2 TSL 5 BASIC19.69■□□□□ 0.74
Col4a6B1AVK5 Tnnt2-202ENSMUST00000112085 1076 ntAPPRIS ALT2 TSL 5 BASIC19.69■□□□□ 0.74
Col4a6B1AVK5 Tnnt2-203ENSMUST00000112086 1094 ntAPPRIS ALT2 TSL 5 BASIC19.69■□□□□ 0.74
Col4a6B1AVK5 Tnnt2-204ENSMUST00000112087 1112 ntAPPRIS ALT2 TSL 5 BASIC19.69■□□□□ 0.74
Col4a6B1AVK5 Cox7a2l-202ENSMUST00000167741 1147 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
Col4a6B1AVK5 H2-K2-201ENSMUST00000174250 1049 ntBASIC19.69■□□□□ 0.74
Col4a6B1AVK5 Tnnt2-206ENSMUST00000178854 1076 ntAPPRIS ALT2 TSL 5 BASIC19.69■□□□□ 0.74
Col4a6B1AVK5 Scamp4-202ENSMUST00000180350 1271 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Col4a6B1AVK5 Tnnt2-211ENSMUST00000189355 1112 ntAPPRIS ALT2 TSL 5 BASIC19.69■□□□□ 0.74
Col4a6B1AVK5 Tnnt2-212ENSMUST00000189732 1123 ntAPPRIS ALT2 TSL 5 BASIC19.69■□□□□ 0.74
Col4a6B1AVK5 Arfip2-212ENSMUST00000209550 1141 ntAPPRIS ALT1 TSL 5 BASIC19.69■□□□□ 0.74
Col4a6B1AVK5 Arfip2-214ENSMUST00000210911 938 ntTSL 5 BASIC19.69■□□□□ 0.74
Col4a6B1AVK5 Nfu1-201ENSMUST00000032060 948 ntAPPRIS P3 TSL 1 (best) BASIC19.69■□□□□ 0.74
Col4a6B1AVK5 Rex1bd-201ENSMUST00000075175 671 ntAPPRIS P2 TSL 1 (best) BASIC19.69■□□□□ 0.74
Col4a6B1AVK5 Gm45640-201ENSMUST00000210665 1896 ntBASIC19.69■□□□□ 0.74
Col4a6B1AVK5 Gpr137-203ENSMUST00000099776 1569 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
Col4a6B1AVK5 Galk1-201ENSMUST00000021114 1406 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Col4a6B1AVK5 Ptpre-202ENSMUST00000209256 2593 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
Col4a6B1AVK5 Clic1-201ENSMUST00000007257 1466 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Col4a6B1AVK5 Gabarap-201ENSMUST00000018711 1351 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Col4a6B1AVK5 Pdp1-204ENSMUST00000108299 2588 ntAPPRIS ALT2 TSL 2 BASIC19.68■□□□□ 0.74
Col4a6B1AVK5 Slc35d2-201ENSMUST00000099441 2303 ntAPPRIS P2 TSL 1 (best) BASIC19.68■□□□□ 0.74
Col4a6B1AVK5 Otud5-204ENSMUST00000115667 2708 ntAPPRIS ALT2 TSL 5 BASIC19.68■□□□□ 0.74
Col4a6B1AVK5 Gtf2a2-204ENSMUST00000119905 622 ntTSL 2 BASIC19.68■□□□□ 0.74
Col4a6B1AVK5 Tnfaip8l2-201ENSMUST00000013851 1122 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Col4a6B1AVK5 Xpa-201ENSMUST00000030013 955 ntAPPRIS P2 TSL 1 (best) BASIC19.68■□□□□ 0.74
Col4a6B1AVK5 Pbx1-206ENSMUST00000176790 1828 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
Col4a6B1AVK5 Ung-202ENSMUST00000102584 2136 ntAPPRIS P3 TSL 1 (best) BASIC19.68■□□□□ 0.74
Col4a6B1AVK5 Krt1-201ENSMUST00000023790 2445 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Col4a6B1AVK5 Gal3st3-201ENSMUST00000061169 2421 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Retrieved 100 of 76,532 protein–RNA pairs in 18.2 ms