Protein–RNA interactions for Protein: A7VMS2

Gm11127, MHC classIb T15, mousemouse

Predictions only

Length 374 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gm11127A7VMS2 Csnk1a1-207ENSMUST00000166990 1860 ntTSL 5 BASIC16.69■□□□□ 0.26
Gm11127A7VMS2 Stoml2-201ENSMUST00000030169 1874 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Gm11127A7VMS2 Slc2a13-202ENSMUST00000109283 6536 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Gm11127A7VMS2 Ak5-201ENSMUST00000045262 3323 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Gm11127A7VMS2 Wt1-205ENSMUST00000143043 3090 ntAPPRIS ALT2 TSL 1 (best) BASIC16.69■□□□□ 0.26
Gm11127A7VMS2 Gm43702-201ENSMUST00000198772 2546 ntBASIC16.69■□□□□ 0.26
Gm11127A7VMS2 Dmtn-207ENSMUST00000228001 2437 ntBASIC16.69■□□□□ 0.26
Gm11127A7VMS2 Sema3c-201ENSMUST00000030568 5491 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Gm11127A7VMS2 Cyp4f14-202ENSMUST00000179434 2207 ntAPPRIS P1 TSL 5 BASIC16.69■□□□□ 0.26
Gm11127A7VMS2 Cyp4f14-201ENSMUST00000054174 2207 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Gm11127A7VMS2 Crebbp-201ENSMUST00000023165 10820 ntAPPRIS P2 TSL 1 (best) BASIC16.69■□□□□ 0.26
Gm11127A7VMS2 Unc119-201ENSMUST00000002127 1329 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Gm11127A7VMS2 Ccser1-203ENSMUST00000126214 5657 ntAPPRIS P1 TSL 5 BASIC16.68■□□□□ 0.26
Gm11127A7VMS2 Synm-205ENSMUST00000208815 2697 ntAPPRIS ALT2 TSL 5 BASIC16.68■□□□□ 0.26
Gm11127A7VMS2 Gm7102-201ENSMUST00000180168 1624 ntAPPRIS P1 BASIC16.68■□□□□ 0.26
Gm11127A7VMS2 Pxmp2-201ENSMUST00000031472 1041 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Gm11127A7VMS2 Ptms-201ENSMUST00000032216 1149 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Gm11127A7VMS2 Cdc42ep5-201ENSMUST00000076831 1025 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Gm11127A7VMS2 Dmtn-210ENSMUST00000228824 2377 ntBASIC16.68■□□□□ 0.26
Gm11127A7VMS2 Dpy19l1-203ENSMUST00000142064 3489 ntAPPRIS P1 TSL 5 BASIC16.68■□□□□ 0.26
Gm11127A7VMS2 D830036C21Rik-202ENSMUST00000208263 1548 ntBASIC16.68■□□□□ 0.26
Gm11127A7VMS2 Coq8b-202ENSMUST00000108378 2276 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Gm11127A7VMS2 Btnl9-202ENSMUST00000066531 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC16.68■□□□□ 0.26
Gm11127A7VMS2 Pik3r2-201ENSMUST00000034296 3165 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Gm11127A7VMS2 Klhl25-202ENSMUST00000171155 3403 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Gm11127A7VMS2 Rxra-201ENSMUST00000077257 4905 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Gm11127A7VMS2 Rbm43-201ENSMUST00000102767 2057 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Gm11127A7VMS2 Sbspon-201ENSMUST00000040695 2748 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Gm11127A7VMS2 Mindy2-201ENSMUST00000049031 8081 ntAPPRIS P2 TSL 1 (best) BASIC16.68■□□□□ 0.26
Gm11127A7VMS2 Marcks-201ENSMUST00000092584 4048 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Gm11127A7VMS2 Crocc-211ENSMUST00000168157 6244 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
Gm11127A7VMS2 Crocc-201ENSMUST00000040222 6248 ntTSL 5 BASIC16.67■□□□□ 0.26
Gm11127A7VMS2 Hsf5-201ENSMUST00000093956 4158 ntAPPRIS P1 TSL 5 BASIC16.67■□□□□ 0.26
Gm11127A7VMS2 Trim72-202ENSMUST00000106248 2134 ntAPPRIS P1 TSL 5 BASIC16.67■□□□□ 0.26
Gm11127A7VMS2 Cspg5-205ENSMUST00000199736 2107 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
Gm11127A7VMS2 Zranb2-203ENSMUST00000106058 2924 ntAPPRIS P2 TSL 1 (best) BASIC16.67■□□□□ 0.26
Gm11127A7VMS2 Ascl4-202ENSMUST00000170396 2016 ntAPPRIS P1 BASIC16.67■□□□□ 0.26
Gm11127A7VMS2 Atp11a-202ENSMUST00000091237 7443 ntAPPRIS P3 TSL 1 (best) BASIC16.67■□□□□ 0.26
Gm11127A7VMS2 Maff-201ENSMUST00000096350 1933 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Gm11127A7VMS2 Ankle2-202ENSMUST00000086674 5025 ntAPPRIS ALT2 TSL 5 BASIC16.67■□□□□ 0.26
Gm11127A7VMS2 Krt8-ps-201ENSMUST00000208495 945 ntBASIC16.67■□□□□ 0.26
Gm11127A7VMS2 Ahcyl2-204ENSMUST00000115242 5152 ntAPPRIS P3 TSL 1 (best) BASIC16.67■□□□□ 0.26
Gm11127A7VMS2 Glra1-202ENSMUST00000102716 2390 ntAPPRIS P3 TSL 1 (best) BASIC16.67■□□□□ 0.26
Gm11127A7VMS2 Gm21949-201ENSMUST00000182006 2369 ntAPPRIS P1 TSL 2 BASIC16.67■□□□□ 0.26
Gm11127A7VMS2 Rabgap1l-216ENSMUST00000195442 1877 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
Gm11127A7VMS2 Deaf1-209ENSMUST00000211537 2882 ntTSL 2 BASIC16.67■□□□□ 0.26
Gm11127A7VMS2 Mchr1-201ENSMUST00000166855 2188 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Gm11127A7VMS2 Csnk1a1-206ENSMUST00000165721 2323 ntAPPRIS ALT1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Gm11127A7VMS2 E030030I06Rik-202ENSMUST00000179054 2081 ntAPPRIS P4 TSL 1 (best) BASIC16.66■□□□□ 0.26
Gm11127A7VMS2 Ago4-201ENSMUST00000084289 6537 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Gm11127A7VMS2 Ubtf-204ENSMUST00000107117 3258 ntAPPRIS ALT2 TSL 5 BASIC16.66■□□□□ 0.26
Gm11127A7VMS2 Klhdc3-202ENSMUST00000165007 1973 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Gm11127A7VMS2 AB041806-201ENSMUST00000062902 2105 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
Gm11127A7VMS2 Pkp4-210ENSMUST00000168631 4484 ntAPPRIS ALT1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Gm11127A7VMS2 Smap1-201ENSMUST00000027339 2289 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Gm11127A7VMS2 Zbtb5-204ENSMUST00000180217 4708 ntAPPRIS P1 TSL 2 BASIC16.66■□□□□ 0.26
Gm11127A7VMS2 Kcnk15-201ENSMUST00000044798 1199 ntAPPRIS P2 TSL 1 (best) BASIC16.66■□□□□ 0.26
Gm11127A7VMS2 Atrnl1-201ENSMUST00000077282 6581 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Gm11127A7VMS2 Rncr4-201ENSMUST00000194541 2234 ntBASIC16.66■□□□□ 0.26
Gm11127A7VMS2 Nr1h2-202ENSMUST00000107910 1948 ntAPPRIS ALT2 TSL 1 (best) BASIC16.66■□□□□ 0.26
Gm11127A7VMS2 Hdhd5-201ENSMUST00000075303 1928 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Gm11127A7VMS2 Cbx2-201ENSMUST00000026662 3807 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Gm11127A7VMS2 Itgb4-210ENSMUST00000169928 6160 ntAPPRIS P2 TSL 5 BASIC16.66■□□□□ 0.26
Gm11127A7VMS2 Wipi2-202ENSMUST00000110778 1959 ntAPPRIS P1 TSL 5 BASIC16.66■□□□□ 0.26
Gm11127A7VMS2 Krt87-201ENSMUST00000081945 1826 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Gm11127A7VMS2 Fst-202ENSMUST00000223640 2612 ntBASIC16.66■□□□□ 0.26
Gm11127A7VMS2 Ppp1r13b-201ENSMUST00000054815 4389 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Gm11127A7VMS2 Emc10-201ENSMUST00000118515 1662 ntAPPRIS ALT2 TSL 1 (best) BASIC16.65■□□□□ 0.26
Gm11127A7VMS2 Scrib-203ENSMUST00000109946 5545 ntAPPRIS ALT2 TSL 1 (best) BASIC16.65■□□□□ 0.26
Gm11127A7VMS2 Rnf112-203ENSMUST00000102661 3118 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Gm11127A7VMS2 Mfsd4a-202ENSMUST00000112365 1536 ntAPPRIS ALT2 TSL 5 BASIC16.65■□□□□ 0.26
Gm11127A7VMS2 Zfp692-202ENSMUST00000153510 1887 ntAPPRIS P1 TSL 5 BASIC16.65■□□□□ 0.26
Gm11127A7VMS2 Sort1-201ENSMUST00000102632 6796 ntAPPRIS P3 TSL 1 (best) BASIC16.65■□□□□ 0.26
Gm11127A7VMS2 Uhrf2-201ENSMUST00000025739 3536 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Gm11127A7VMS2 Zfp618-201ENSMUST00000030043 1582 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
Gm11127A7VMS2 Rab34-202ENSMUST00000056241 1558 ntTSL 5 BASIC16.65■□□□□ 0.26
Gm11127A7VMS2 Ncoa7-206ENSMUST00000215725 1445 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
Gm11127A7VMS2 Tmem59-202ENSMUST00000106753 1148 ntTSL 5 BASIC16.65■□□□□ 0.26
Gm11127A7VMS2 Gm26558-201ENSMUST00000180559 861 ntAPPRIS P1 BASIC16.65■□□□□ 0.26
Gm11127A7VMS2 Sarnp-203ENSMUST00000219512 953 ntTSL 3 BASIC16.65■□□□□ 0.26
Gm11127A7VMS2 Gm26708-203ENSMUST00000208236 1624 ntTSL 5 BASIC16.65■□□□□ 0.26
Gm11127A7VMS2 Plin1-202ENSMUST00000178257 1841 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Gm11127A7VMS2 Ube2d2a-201ENSMUST00000167406 2393 ntAPPRIS P1 TSL 5 BASIC16.65■□□□□ 0.26
Gm11127A7VMS2 Naxd-202ENSMUST00000177955 1307 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Gm11127A7VMS2 Dusp28-201ENSMUST00000060913 1314 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Gm11127A7VMS2 Fbrsl1-206ENSMUST00000198834 2571 ntAPPRIS ALT2 TSL 1 (best) BASIC16.65■□□□□ 0.26
Gm11127A7VMS2 Yipf2-202ENSMUST00000078572 1894 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Gm11127A7VMS2 Ankrd9-201ENSMUST00000043459 1706 ntAPPRIS P2 TSL 1 (best) BASIC16.65■□□□□ 0.26
Gm11127A7VMS2 Zfp467-202ENSMUST00000114556 2287 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
Gm11127A7VMS2 Pparg-202ENSMUST00000171644 2125 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Gm11127A7VMS2 Tfdp2-202ENSMUST00000165120 2341 ntAPPRIS ALT2 TSL 1 (best) BASIC16.64■□□□□ 0.25
Gm11127A7VMS2 Eif2b4-212ENSMUST00000202758 1767 ntTSL 5 BASIC16.64■□□□□ 0.25
Gm11127A7VMS2 Smarcd2-201ENSMUST00000021052 2747 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Gm11127A7VMS2 Vgf-201ENSMUST00000041543 2553 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Gm11127A7VMS2 Tomm40-201ENSMUST00000032555 1646 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Gm11127A7VMS2 Gm14424-201ENSMUST00000143191 895 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
Gm11127A7VMS2 Cdkn1c-201ENSMUST00000037287 1901 ntAPPRIS P3 TSL 1 (best) BASIC16.64■□□□□ 0.25
Gm11127A7VMS2 Zfp78-205ENSMUST00000208030 2169 ntAPPRIS ALT2 TSL 1 (best) BASIC16.64■□□□□ 0.25
Gm11127A7VMS2 Reep6-207ENSMUST00000186864 2015 ntAPPRIS P3 TSL 1 (best) BASIC16.63■□□□□ 0.25
Gm11127A7VMS2 Gm4969-202ENSMUST00000141380 1892 ntAPPRIS P1 TSL 5 BASIC16.63■□□□□ 0.25
Retrieved 100 of 76,532 protein–RNA pairs in 30.4 ms