Protein–RNA interactions for Protein: A6X942

Sh2d4b, SH2 domain-containing protein 4B, mousemouse

Predictions only

Length 431 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sh2d4bA6X942 Coro1a-209ENSMUST00000173108 1170 ntTSL 5 BASIC20.19■□□□□ 0.82
Sh2d4bA6X942 Rab7-206ENSMUST00000203674 424 ntTSL 5 BASIC20.19■□□□□ 0.82
Sh2d4bA6X942 Gm20049-201ENSMUST00000219950 730 ntBASIC20.19■□□□□ 0.82
Sh2d4bA6X942 Tnnt2-201ENSMUST00000027671 1064 ntAPPRIS ALT2 TSL 5 BASIC20.19■□□□□ 0.82
Sh2d4bA6X942 Gm6365-201ENSMUST00000054711 744 ntBASIC20.19■□□□□ 0.82
Sh2d4bA6X942 A230083G16Rik-201ENSMUST00000069553 991 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
Sh2d4bA6X942 Arhgap23-203ENSMUST00000121799 5816 ntAPPRIS P1 TSL 5 BASIC20.19■□□□□ 0.82
Sh2d4bA6X942 Gm43859-201ENSMUST00000200075 1412 ntBASIC20.19■□□□□ 0.82
Sh2d4bA6X942 Pink1-201ENSMUST00000030536 2375 ntAPPRIS P2 TSL 1 (best) BASIC20.19■□□□□ 0.82
Sh2d4bA6X942 Magi2-203ENSMUST00000115267 4478 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
Sh2d4bA6X942 Nnat-205ENSMUST00000153739 1146 ntAPPRIS ALT1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Sh2d4bA6X942 Mpc1-208ENSMUST00000155364 958 ntAPPRIS P1 TSL 2 BASIC20.18■□□□□ 0.82
Sh2d4bA6X942 Nnat-206ENSMUST00000172487 404 ntTSL 5 BASIC20.18■□□□□ 0.82
Sh2d4bA6X942 Nnat-210ENSMUST00000173839 1135 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
Sh2d4bA6X942 2610035F20Rik-202ENSMUST00000177306 1149 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
Sh2d4bA6X942 Gm40460-201ENSMUST00000211591 735 ntAPPRIS P1 BASIC20.18■□□□□ 0.82
Sh2d4bA6X942 AC158538.1-201ENSMUST00000225870 294 ntBASIC20.18■□□□□ 0.82
Sh2d4bA6X942 AC135637.1-201ENSMUST00000227750 365 ntBASIC20.18■□□□□ 0.82
Sh2d4bA6X942 Hopxos-201ENSMUST00000148568 1661 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
Sh2d4bA6X942 Jph1-201ENSMUST00000038382 4809 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Sh2d4bA6X942 Gnb5-206ENSMUST00000215875 2105 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Sh2d4bA6X942 Scarb1-201ENSMUST00000086075 2521 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Sh2d4bA6X942 Arl4d-201ENSMUST00000039388 1382 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Sh2d4bA6X942 Rbm7-201ENSMUST00000170000 1773 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Sh2d4bA6X942 Rhbdd3-201ENSMUST00000036320 1790 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
Sh2d4bA6X942 Sae1-201ENSMUST00000094815 1875 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Sh2d4bA6X942 Rhov-201ENSMUST00000037360 1703 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Sh2d4bA6X942 Cpsf4-202ENSMUST00000160422 1756 ntAPPRIS ALT1 TSL 5 BASIC20.17■□□□□ 0.82
Sh2d4bA6X942 Eda-204ENSMUST00000113777 1056 ntTSL 5 BASIC20.17■□□□□ 0.82
Sh2d4bA6X942 Eda-201ENSMUST00000071453 1152 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
Sh2d4bA6X942 Dhx33-204ENSMUST00000124464 1835 ntTSL 5 BASIC20.17■□□□□ 0.82
Sh2d4bA6X942 Noc2l-201ENSMUST00000179543 2785 ntAPPRIS P2 TSL 1 (best) BASIC20.17■□□□□ 0.82
Sh2d4bA6X942 Rrad-201ENSMUST00000034351 1577 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Sh2d4bA6X942 Gramd1a-202ENSMUST00000085636 2543 ntAPPRIS ALT2 TSL 5 BASIC20.16■□□□□ 0.82
Sh2d4bA6X942 Zcchc24-201ENSMUST00000069180 4556 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Sh2d4bA6X942 Gm13146-201ENSMUST00000118508 780 ntBASIC20.16■□□□□ 0.82
Sh2d4bA6X942 Gm45015-201ENSMUST00000207943 1364 ntAPPRIS P1 TSL 5 BASIC20.16■□□□□ 0.82
Sh2d4bA6X942 Ugdh-201ENSMUST00000031103 2550 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Sh2d4bA6X942 Tpst2-202ENSMUST00000071455 1741 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Sh2d4bA6X942 Gdf11-201ENSMUST00000026408 4062 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Sh2d4bA6X942 Pank2-204ENSMUST00000150843 4266 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Sh2d4bA6X942 Ppm1b-201ENSMUST00000080217 2753 ntAPPRIS ALT2 TSL 1 (best) BASIC20.15■□□□□ 0.82
Sh2d4bA6X942 Sqstm1-205ENSMUST00000143379 1266 ntTSL 5 BASIC20.15■□□□□ 0.82
Sh2d4bA6X942 H2-Q7-201ENSMUST00000071951 1406 ntAPPRIS P2 TSL 1 (best) BASIC20.15■□□□□ 0.82
Sh2d4bA6X942 Lypd3-201ENSMUST00000080718 1649 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
Sh2d4bA6X942 Sec24b-201ENSMUST00000001079 5128 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
Sh2d4bA6X942 Arhgap21-201ENSMUST00000114594 7351 ntAPPRIS ALT2 TSL 5 BASIC20.15■□□□□ 0.82
Sh2d4bA6X942 Zfp777-202ENSMUST00000114583 3111 ntAPPRIS P3 TSL 5 BASIC20.15■□□□□ 0.82
Sh2d4bA6X942 Slc30a9-201ENSMUST00000113676 5648 ntAPPRIS ALT2 TSL 1 (best) BASIC20.15■□□□□ 0.82
Sh2d4bA6X942 Uba5-201ENSMUST00000035166 2404 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.82
Sh2d4bA6X942 Klhl15-205ENSMUST00000113916 2363 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.82
Sh2d4bA6X942 Hpse-202ENSMUST00000112908 1958 ntAPPRIS ALT2 TSL 1 (best) BASIC20.14■□□□□ 0.81
Sh2d4bA6X942 Cdkn1c-201ENSMUST00000037287 1901 ntAPPRIS P3 TSL 1 (best) BASIC20.14■□□□□ 0.81
Sh2d4bA6X942 Dalrd3-201ENSMUST00000019183 1746 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
Sh2d4bA6X942 Sncb-201ENSMUST00000036825 1351 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
Sh2d4bA6X942 Klhl25-203ENSMUST00000205612 1343 ntTSL 1 (best) BASIC20.14■□□□□ 0.81
Sh2d4bA6X942 Tgfbr3l-201ENSMUST00000110993 1075 ntAPPRIS P1 TSL 5 BASIC20.14■□□□□ 0.81
Sh2d4bA6X942 Zfp560-202ENSMUST00000143992 608 ntTSL 1 (best) BASIC20.14■□□□□ 0.81
Sh2d4bA6X942 Mcl1-202ENSMUST00000178686 858 ntAPPRIS ALT2 TSL 1 (best) BASIC20.14■□□□□ 0.81
Sh2d4bA6X942 Rps23-201ENSMUST00000051955 937 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
Sh2d4bA6X942 Adrb1-201ENSMUST00000038949 2491 ntAPPRIS P1 BASIC20.14■□□□□ 0.81
Sh2d4bA6X942 Fgfr2-217ENSMUST00000124096 2425 ntTSL 5 BASIC20.14■□□□□ 0.81
Sh2d4bA6X942 Vgf-202ENSMUST00000186451 2277 ntAPPRIS P1 TSL 5 BASIC20.14■□□□□ 0.81
Sh2d4bA6X942 C230096K16Rik-201ENSMUST00000198074 1722 ntBASIC20.13■□□□□ 0.81
Sh2d4bA6X942 1600012H06Rik-203ENSMUST00000174004 1466 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
Sh2d4bA6X942 Trabd-206ENSMUST00000169891 1422 ntAPPRIS ALT2 TSL 1 (best) BASIC20.13■□□□□ 0.81
Sh2d4bA6X942 Phf14-201ENSMUST00000090632 3985 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
Sh2d4bA6X942 1110046J04Rik-201ENSMUST00000147622 397 ntTSL 3 BASIC20.13■□□□□ 0.81
Sh2d4bA6X942 1700067K01Rik-201ENSMUST00000060357 1291 ntAPPRIS ALT2 TSL 1 (best) BASIC20.13■□□□□ 0.81
Sh2d4bA6X942 Ttc9b-201ENSMUST00000008088 2052 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
Sh2d4bA6X942 Gyg-201ENSMUST00000118015 1922 ntAPPRIS ALT2 TSL 1 (best) BASIC20.13■□□□□ 0.81
Sh2d4bA6X942 Maf1-205ENSMUST00000160853 1651 ntAPPRIS P2 TSL 1 (best) BASIC20.13■□□□□ 0.81
Sh2d4bA6X942 Celf6-203ENSMUST00000118549 2973 ntAPPRIS ALT2 TSL 5 BASIC20.13■□□□□ 0.81
Sh2d4bA6X942 Lpcat3-201ENSMUST00000004381 2281 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
Sh2d4bA6X942 Fgfrl1-202ENSMUST00000112560 2318 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
Sh2d4bA6X942 Ube2b-202ENSMUST00000109086 585 ntAPPRIS P1 TSL 2 BASIC20.12■□□□□ 0.81
Sh2d4bA6X942 Vkorc1-202ENSMUST00000119922 387 ntTSL 3 BASIC20.12■□□□□ 0.81
Sh2d4bA6X942 1700101I19Rik-202ENSMUST00000186712 510 ntBASIC20.12■□□□□ 0.81
Sh2d4bA6X942 Catsper2-201ENSMUST00000038073 2247 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
Sh2d4bA6X942 Cnbp-208ENSMUST00000204653 2175 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
Sh2d4bA6X942 Cnbp-201ENSMUST00000032138 2178 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
Sh2d4bA6X942 Rab7-202ENSMUST00000113596 1657 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
Sh2d4bA6X942 Krtap5-3-202ENSMUST00000187512 1652 ntAPPRIS P2 BASIC20.12■□□□□ 0.81
Sh2d4bA6X942 Ttc9-202ENSMUST00000218362 4754 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
Sh2d4bA6X942 Zmym3-202ENSMUST00000117637 1593 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
Sh2d4bA6X942 Hoxc11-201ENSMUST00000001701 2021 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
Sh2d4bA6X942 Mtfmt-201ENSMUST00000074792 2042 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
Sh2d4bA6X942 Cacnb1-202ENSMUST00000092736 1880 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
Sh2d4bA6X942 Cdkl3-204ENSMUST00000109077 2605 ntAPPRIS ALT2 TSL 5 BASIC20.11■□□□□ 0.81
Sh2d4bA6X942 Zmiz2-201ENSMUST00000012612 4199 ntAPPRIS P2 TSL 5 BASIC20.11■□□□□ 0.81
Sh2d4bA6X942 Jmjd7-201ENSMUST00000044675 1373 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
Sh2d4bA6X942 Trmt61a-202ENSMUST00000168338 2131 ntAPPRIS P1 TSL 5 BASIC20.11■□□□□ 0.81
Sh2d4bA6X942 Nrg3-203ENSMUST00000173780 2137 ntAPPRIS ALT2 TSL 5 BASIC20.11■□□□□ 0.81
Sh2d4bA6X942 Bag5-201ENSMUST00000054636 2139 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
Sh2d4bA6X942 Golph3-202ENSMUST00000226517 2359 ntBASIC20.11■□□□□ 0.81
Sh2d4bA6X942 Etv2-201ENSMUST00000108147 1048 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
Sh2d4bA6X942 Mrps18a-202ENSMUST00000123646 621 ntTSL 2 BASIC20.11■□□□□ 0.81
Sh2d4bA6X942 Gm7977-201ENSMUST00000193787 748 ntBASIC20.11■□□□□ 0.81
Sh2d4bA6X942 Rpl18-202ENSMUST00000209287 1027 ntTSL 3 BASIC20.11■□□□□ 0.81
Sh2d4bA6X942 Hikeshi-201ENSMUST00000075010 715 ntTSL 3 BASIC20.11■□□□□ 0.81
Retrieved 100 of 76,532 protein–RNA pairs in 28 ms