Protein–RNA interactions for Protein: A3KMP2

Ttc38, Tetratricopeptide repeat protein 38, mousemouse

Predictions only

Length 465 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ttc38A3KMP2 Gm16192-201ENSMUST00000148357 937 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
Ttc38A3KMP2 1700017B05Rik-204ENSMUST00000215298 1023 ntAPPRIS ALT2 TSL 1 (best) BASIC20.61■□□□□ 0.89
Ttc38A3KMP2 Arhgef1-204ENSMUST00000117796 3508 ntAPPRIS ALT2 TSL 1 (best) BASIC20.61■□□□□ 0.89
Ttc38A3KMP2 Hpca-201ENSMUST00000030572 1525 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Ttc38A3KMP2 Dio3-202ENSMUST00000173014 2030 ntAPPRIS P1 BASIC20.61■□□□□ 0.89
Ttc38A3KMP2 Arpc5-202ENSMUST00000097536 1737 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
Ttc38A3KMP2 Sos2-206ENSMUST00000183277 4512 ntAPPRIS ALT2 TSL 5 BASIC20.61■□□□□ 0.89
Ttc38A3KMP2 Patz1-203ENSMUST00000094471 2930 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
Ttc38A3KMP2 Creb3l1-201ENSMUST00000028663 2603 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Ttc38A3KMP2 Gm15645-201ENSMUST00000131504 2208 ntTSL 5 BASIC20.6■□□□□ 0.89
Ttc38A3KMP2 Tnfsf11-201ENSMUST00000022592 2236 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Ttc38A3KMP2 Gclm-206ENSMUST00000178826 1002 ntAPPRIS P1 TSL 5 BASIC20.6■□□□□ 0.89
Ttc38A3KMP2 Mrpl40-201ENSMUST00000023391 1185 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Ttc38A3KMP2 Hs3st5-202ENSMUST00000167191 2408 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Ttc38A3KMP2 Six3os1-206ENSMUST00000175921 2737 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
Ttc38A3KMP2 Zfp579-206ENSMUST00000162731 2489 ntAPPRIS P1 BASIC20.6■□□□□ 0.89
Ttc38A3KMP2 Jmjd7-201ENSMUST00000044675 1373 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Ttc38A3KMP2 Zmynd10-201ENSMUST00000010188 1765 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Ttc38A3KMP2 Shkbp1-201ENSMUST00000003857 2358 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Ttc38A3KMP2 Mtmr9-201ENSMUST00000058679 2570 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Ttc38A3KMP2 Paics-203ENSMUST00000120912 2345 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Ttc38A3KMP2 D11Wsu47e-202ENSMUST00000106621 2062 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Ttc38A3KMP2 9430060I03Rik-201ENSMUST00000191563 1689 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
Ttc38A3KMP2 Lgmn-202ENSMUST00000110020 1835 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Ttc38A3KMP2 Rab5a-201ENSMUST00000017975 2357 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Ttc38A3KMP2 Gp5-201ENSMUST00000061190 2196 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Ttc38A3KMP2 Nexmif-201ENSMUST00000056502 5211 ntAPPRIS ALT2 TSL 1 (best) BASIC20.59■□□□□ 0.89
Ttc38A3KMP2 C230096K16Rik-201ENSMUST00000198074 1722 ntBASIC20.58■□□□□ 0.89
Ttc38A3KMP2 Tal1-204ENSMUST00000162489 2894 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
Ttc38A3KMP2 Klc3-203ENSMUST00000108458 1823 ntTSL 1 (best) BASIC20.58■□□□□ 0.89
Ttc38A3KMP2 Adamtsl5-201ENSMUST00000095446 1957 ntAPPRIS P1 TSL 5 BASIC20.58■□□□□ 0.89
Ttc38A3KMP2 Nhlh1-201ENSMUST00000059794 2464 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
Ttc38A3KMP2 Gfra4-205ENSMUST00000110239 810 ntAPPRIS ALT2 TSL 1 (best) BASIC20.58■□□□□ 0.89
Ttc38A3KMP2 Gm11175-202ENSMUST00000211380 408 ntTSL 3 BASIC20.58■□□□□ 0.89
Ttc38A3KMP2 Gfra4-201ENSMUST00000028787 909 ntAPPRIS P3 TSL 1 (best) BASIC20.58■□□□□ 0.89
Ttc38A3KMP2 Cox6a1-201ENSMUST00000040154 571 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
Ttc38A3KMP2 Mfap4-201ENSMUST00000040522 939 ntAPPRIS ALT2 TSL 2 BASIC20.58■□□□□ 0.89
Ttc38A3KMP2 Acot7-201ENSMUST00000030779 1425 ntAPPRIS ALT2 TSL 1 (best) BASIC20.58■□□□□ 0.88
Ttc38A3KMP2 Wdsub1-201ENSMUST00000028368 2072 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
Ttc38A3KMP2 Wnt10b-203ENSMUST00000226610 2217 ntAPPRIS P1 BASIC20.58■□□□□ 0.88
Ttc38A3KMP2 Slc17a7-202ENSMUST00000209634 1860 ntTSL 5 BASIC20.58■□□□□ 0.88
Ttc38A3KMP2 Gm29430-202ENSMUST00000191453 2015 ntTSL 5 BASIC20.58■□□□□ 0.88
Ttc38A3KMP2 Mex3d-201ENSMUST00000105350 3266 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
Ttc38A3KMP2 Anks3-201ENSMUST00000023157 2483 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
Ttc38A3KMP2 Gab2-201ENSMUST00000004622 6168 ntAPPRIS P3 TSL 1 (best) BASIC20.57■□□□□ 0.88
Ttc38A3KMP2 Coq9-201ENSMUST00000034234 1789 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Ttc38A3KMP2 Cyp4f15-204ENSMUST00000168171 2168 ntAPPRIS P3 TSL 1 (best) BASIC20.57■□□□□ 0.88
Ttc38A3KMP2 Tmem121-201ENSMUST00000058491 1574 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Ttc38A3KMP2 Rpl13-201ENSMUST00000000756 780 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Ttc38A3KMP2 Gm10306-201ENSMUST00000094969 533 ntAPPRIS P1 BASIC20.57■□□□□ 0.88
Ttc38A3KMP2 Dll3-201ENSMUST00000108315 2618 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Ttc38A3KMP2 Ythdf1-201ENSMUST00000037299 3184 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Ttc38A3KMP2 Fbxl5-201ENSMUST00000047857 2858 ntAPPRIS P2 TSL 1 (best) BASIC20.56■□□□□ 0.88
Ttc38A3KMP2 Ntn5-201ENSMUST00000107742 1574 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
Ttc38A3KMP2 Gm9988-201ENSMUST00000069786 435 ntBASIC20.56■□□□□ 0.88
Ttc38A3KMP2 Pno1-201ENSMUST00000020317 1544 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Ttc38A3KMP2 Azi2-205ENSMUST00000133580 2156 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Ttc38A3KMP2 Pxk-202ENSMUST00000112689 2840 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
Ttc38A3KMP2 Ankrd40-203ENSMUST00000107818 3487 ntAPPRIS P3 TSL 5 BASIC20.56■□□□□ 0.88
Ttc38A3KMP2 Uck1-201ENSMUST00000002625 2005 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Ttc38A3KMP2 Gm11747-201ENSMUST00000142751 1648 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
Ttc38A3KMP2 Bmpr1b-203ENSMUST00000106230 2147 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Ttc38A3KMP2 Psmd3-201ENSMUST00000017365 2148 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Ttc38A3KMP2 Golga7b-202ENSMUST00000122375 2836 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Ttc38A3KMP2 Nrxn2-205ENSMUST00000113462 6667 ntAPPRIS P4 TSL 1 (best) BASIC20.55■□□□□ 0.88
Ttc38A3KMP2 Chtop-204ENSMUST00000107342 2411 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
Ttc38A3KMP2 Ndfip2-206ENSMUST00000181969 2532 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Ttc38A3KMP2 Gm20421-201ENSMUST00000153344 672 ntTSL 3 BASIC20.55■□□□□ 0.88
Ttc38A3KMP2 Crnde-206ENSMUST00000179421 773 ntTSL 3 BASIC20.55■□□□□ 0.88
Ttc38A3KMP2 Gm27032-201ENSMUST00000183124 1116 ntBASIC20.55■□□□□ 0.88
Ttc38A3KMP2 Cdkl3-206ENSMUST00000109079 2051 ntAPPRIS ALT2 TSL 5 BASIC20.55■□□□□ 0.88
Ttc38A3KMP2 Cdkl3-208ENSMUST00000109081 2063 ntAPPRIS ALT2 TSL 5 BASIC20.55■□□□□ 0.88
Ttc38A3KMP2 Rnf32-204ENSMUST00000160246 1565 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Ttc38A3KMP2 Pknox1-203ENSMUST00000175806 2272 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Ttc38A3KMP2 Zfp385b-204ENSMUST00000111831 2734 ntAPPRIS P3 TSL 1 (best) BASIC20.55■□□□□ 0.88
Ttc38A3KMP2 Klhl25-203ENSMUST00000205612 1343 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
Ttc38A3KMP2 Cd37-209ENSMUST00000211373 1428 ntAPPRIS ALT2 TSL 1 (best) BASIC20.54■□□□□ 0.88
Ttc38A3KMP2 Slc35d2-201ENSMUST00000099441 2303 ntAPPRIS P2 TSL 1 (best) BASIC20.54■□□□□ 0.88
Ttc38A3KMP2 Zyg11a-202ENSMUST00000106690 2421 ntAPPRIS ALT2 TSL 5 BASIC20.54■□□□□ 0.88
Ttc38A3KMP2 St3gal3-201ENSMUST00000030263 2549 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Ttc38A3KMP2 Rabgap1l-201ENSMUST00000028049 2748 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Ttc38A3KMP2 Gnai2-203ENSMUST00000192837 421 ntTSL 5 BASIC20.54■□□□□ 0.88
Ttc38A3KMP2 Gm45168-202ENSMUST00000206461 1069 ntTSL 5 BASIC20.54■□□□□ 0.88
Ttc38A3KMP2 Krtap5-3-201ENSMUST00000084414 1074 ntAPPRIS ALT2 TSL 5 BASIC20.54■□□□□ 0.88
Ttc38A3KMP2 Iars2-203ENSMUST00000110975 2801 ntTSL 5 BASIC20.54■□□□□ 0.88
Ttc38A3KMP2 Ehmt2-201ENSMUST00000013931 4026 ntAPPRIS P4 TSL 1 (best) BASIC20.54■□□□□ 0.88
Ttc38A3KMP2 Mdfi-201ENSMUST00000035375 1371 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Ttc38A3KMP2 Hgsnat-201ENSMUST00000037609 2694 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Ttc38A3KMP2 Gm9885-202ENSMUST00000186234 2209 ntBASIC20.54■□□□□ 0.88
Ttc38A3KMP2 Anapc16-204ENSMUST00000182898 1852 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Ttc38A3KMP2 Gm4779-203ENSMUST00000147742 1991 ntAPPRIS P1 TSL 5 BASIC20.54■□□□□ 0.88
Ttc38A3KMP2 Dhps-201ENSMUST00000078665 1333 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Ttc38A3KMP2 Tbkbp1-203ENSMUST00000107614 2391 ntAPPRIS ALT2 TSL 5 BASIC20.53■□□□□ 0.88
Ttc38A3KMP2 Reep4-203ENSMUST00000226563 1444 ntBASIC20.53■□□□□ 0.88
Ttc38A3KMP2 3830408C21Rik-206ENSMUST00000225489 1810 ntBASIC20.53■□□□□ 0.88
Ttc38A3KMP2 Gm26694-201ENSMUST00000180868 1902 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
Ttc38A3KMP2 Neil2-201ENSMUST00000038229 1932 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Ttc38A3KMP2 Pdp1-206ENSMUST00000108302 2525 ntTSL 3 BASIC20.53■□□□□ 0.88
Ttc38A3KMP2 Ints6-201ENSMUST00000053959 4993 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Ttc38A3KMP2 Gm26881-201ENSMUST00000180426 593 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
Retrieved 100 of 76,532 protein–RNA pairs in 29.8 ms