Protein–RNA interactions for Protein: A2AN08

Ubr4, E3 ubiquitin-protein ligase UBR4, mousemouse

Predictions only

Length 5,180 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ubr4A2AN08 Amn-201ENSMUST00000021707 1701 ntAPPRIS P1 TSL 1 (best) BASIC10.13□□□□□ -0.79
Ubr4A2AN08 Gm15545-203ENSMUST00000150613 1059 ntTSL 1 (best) BASIC10.13□□□□□ -0.79
Ubr4A2AN08 Arl11-201ENSMUST00000055159 1482 ntAPPRIS P1 TSL 1 (best) BASIC10.13□□□□□ -0.79
Ubr4A2AN08 Ino80dos-204ENSMUST00000188602 678 ntTSL 2 BASIC10.13□□□□□ -0.79
Ubr4A2AN08 Gm20646-202ENSMUST00000199521 660 ntTSL 3 BASIC10.13□□□□□ -0.79
Ubr4A2AN08 Pcbp4-201ENSMUST00000024260 2035 ntAPPRIS P1 TSL 1 (best) BASIC10.13□□□□□ -0.79
Ubr4A2AN08 Syap1-201ENSMUST00000033723 2087 ntAPPRIS P1 TSL 1 (best) BASIC10.12□□□□□ -0.79
Ubr4A2AN08 Gm27032-201ENSMUST00000183124 1116 ntBASIC10.12□□□□□ -0.79
Ubr4A2AN08 AC156016.1-201ENSMUST00000227190 1035 ntBASIC10.12□□□□□ -0.79
Ubr4A2AN08 Pax1-201ENSMUST00000109968 2643 ntAPPRIS P1 TSL 1 (best) BASIC10.12□□□□□ -0.79
Ubr4A2AN08 Pitx2-201ENSMUST00000029657 1680 ntTSL 5 BASIC10.12□□□□□ -0.79
Ubr4A2AN08 Olfr572-203ENSMUST00000215782 1233 ntAPPRIS P1 TSL 5 BASIC10.12□□□□□ -0.79
Ubr4A2AN08 Hist1h2af-201ENSMUST00000073261 399 ntAPPRIS P1 BASIC10.12□□□□□ -0.79
Ubr4A2AN08 Setd4-202ENSMUST00000113951 1826 ntAPPRIS P1 TSL 5 BASIC10.12□□□□□ -0.79
Ubr4A2AN08 Gm26854-201ENSMUST00000180418 705 ntTSL 1 (best) BASIC10.12□□□□□ -0.79
Ubr4A2AN08 Timm13-201ENSMUST00000020440 1225 ntAPPRIS P1 TSL 1 (best) BASIC10.12□□□□□ -0.79
Ubr4A2AN08 AC148328.1-201ENSMUST00000216448 920 ntTSL 5 BASIC10.12□□□□□ -0.79
Ubr4A2AN08 Lbx2-201ENSMUST00000041265 817 ntAPPRIS P1 TSL 1 (best) BASIC10.12□□□□□ -0.79
Ubr4A2AN08 Nol7-201ENSMUST00000071926 1800 ntAPPRIS P2 TSL 1 (best) BASIC10.12□□□□□ -0.79
Ubr4A2AN08 Fgf8-205ENSMUST00000111927 843 ntAPPRIS ALT2 TSL 1 (best) BASIC10.12□□□□□ -0.79
Ubr4A2AN08 4930519L02Rik-201ENSMUST00000197683 619 ntTSL 1 (best) BASIC10.12□□□□□ -0.79
Ubr4A2AN08 Gm2270-201ENSMUST00000222858 797 ntTSL 1 (best) BASIC10.12□□□□□ -0.79
Ubr4A2AN08 Pnmt-201ENSMUST00000041301 1154 ntAPPRIS P1 TSL 1 (best) BASIC10.12□□□□□ -0.79
Ubr4A2AN08 Tbxa2r-201ENSMUST00000105325 1765 ntAPPRIS P1 TSL 1 (best) BASIC10.12□□□□□ -0.79
Ubr4A2AN08 H19-202ENSMUST00000136359 2286 ntTSL 1 (best) BASIC10.11□□□□□ -0.79
Ubr4A2AN08 Pdcd2-205ENSMUST00000154293 1924 ntTSL 1 (best) BASIC10.11□□□□□ -0.79
Ubr4A2AN08 Sapcd2-203ENSMUST00000114293 1600 ntAPPRIS ALT2 TSL 1 (best) BASIC10.11□□□□□ -0.79
Ubr4A2AN08 Mpv17l-205ENSMUST00000143697 580 ntTSL 2 BASIC10.11□□□□□ -0.79
Ubr4A2AN08 Cnot6-201ENSMUST00000020624 2498 ntTSL 1 (best) BASIC10.11□□□□□ -0.79
Ubr4A2AN08 Mthfd2l-201ENSMUST00000071652 2159 ntAPPRIS P1 TSL 5 BASIC10.11□□□□□ -0.79
Ubr4A2AN08 Coq9-201ENSMUST00000034234 1789 ntAPPRIS P1 TSL 1 (best) BASIC10.11□□□□□ -0.79
Ubr4A2AN08 Dnajc24-201ENSMUST00000102555 1197 ntAPPRIS P1 TSL 1 (best) BASIC10.11□□□□□ -0.79
Ubr4A2AN08 Gm14207-203ENSMUST00000156538 988 ntTSL 2 BASIC10.11□□□□□ -0.79
Ubr4A2AN08 Slc19a2-204ENSMUST00000169394 894 ntTSL 5 BASIC10.11□□□□□ -0.79
Ubr4A2AN08 Mrps12-204ENSMUST00000171183 883 ntAPPRIS P1 TSL 2 BASIC10.11□□□□□ -0.79
Ubr4A2AN08 Hist1h2br-203ENSMUST00000180288 1256 ntTSL 1 (best) BASIC10.11□□□□□ -0.79
Ubr4A2AN08 Hist1h2bc-201ENSMUST00000018246 1156 ntAPPRIS P1 TSL 1 (best) BASIC10.11□□□□□ -0.79
Ubr4A2AN08 Hist1h2ba-201ENSMUST00000052776 384 ntAPPRIS P1 BASIC10.11□□□□□ -0.79
Ubr4A2AN08 Kmt5b-216ENSMUST00000176926 1551 ntAPPRIS ALT2 TSL 5 BASIC10.11□□□□□ -0.79
Ubr4A2AN08 Espn-211ENSMUST00000105657 1375 ntTSL 1 (best) BASIC10.11□□□□□ -0.79
Ubr4A2AN08 Gm13884-201ENSMUST00000118103 829 ntBASIC10.11□□□□□ -0.79
Ubr4A2AN08 Gm12382-201ENSMUST00000122005 922 ntBASIC10.11□□□□□ -0.79
Ubr4A2AN08 Dmrta2os-202ENSMUST00000141893 691 ntTSL 3 BASIC10.11□□□□□ -0.79
Ubr4A2AN08 Gm22697-201ENSMUST00000175194 63 ntBASIC10.11□□□□□ -0.79
Ubr4A2AN08 Otud5-205ENSMUST00000115668 2543 ntTSL 1 (best) BASIC10.11□□□□□ -0.79
Ubr4A2AN08 Kxd1-202ENSMUST00000117580 696 ntTSL 5 BASIC10.11□□□□□ -0.79
Ubr4A2AN08 Nudt22-203ENSMUST00000180765 1073 ntAPPRIS P1 TSL 5 BASIC10.11□□□□□ -0.79
Ubr4A2AN08 Pdlim5-202ENSMUST00000058626 873 ntTSL 5 BASIC10.11□□□□□ -0.79
Ubr4A2AN08 Maf-201ENSMUST00000069009 3223 ntAPPRIS ALT2 TSL 1 (best) BASIC10.11□□□□□ -0.79
Ubr4A2AN08 Gm8258-201ENSMUST00000055593 1449 ntBASIC10.11□□□□□ -0.79
Ubr4A2AN08 Pts-201ENSMUST00000034570 1046 ntAPPRIS P1 TSL 1 (best) BASIC10.1□□□□□ -0.79
Ubr4A2AN08 Rpl21-203ENSMUST00000099272 1067 ntAPPRIS P1 TSL 3 BASIC10.1□□□□□ -0.79
Ubr4A2AN08 Dxo-201ENSMUST00000046244 1519 ntAPPRIS P1 TSL 1 (best) BASIC10.1□□□□□ -0.79
Ubr4A2AN08 Srsf2-201ENSMUST00000092404 1899 ntAPPRIS P1 TSL 1 (best) BASIC10.1□□□□□ -0.79
Ubr4A2AN08 Gm7712-202ENSMUST00000222331 1510 ntBASIC10.1□□□□□ -0.79
Ubr4A2AN08 Aire-203ENSMUST00000105396 1749 ntAPPRIS ALT2 TSL 1 (best) BASIC10.1□□□□□ -0.79
Ubr4A2AN08 Aire-214ENSMUST00000154374 1712 ntAPPRIS ALT2 TSL 1 (best) BASIC10.1□□□□□ -0.79
Ubr4A2AN08 Aire-215ENSMUST00000155021 1737 ntAPPRIS ALT2 TSL 1 (best) BASIC10.1□□□□□ -0.79
Ubr4A2AN08 Gm25016-201ENSMUST00000158399 131 ntBASIC10.1□□□□□ -0.79
Ubr4A2AN08 Flg-202ENSMUST00000178008 768 ntAPPRIS ALT2 BASIC10.1□□□□□ -0.79
Ubr4A2AN08 Flg-205ENSMUST00000179250 765 ntAPPRIS ALT2 BASIC10.1□□□□□ -0.79
Ubr4A2AN08 Flg-206ENSMUST00000179477 768 ntAPPRIS ALT2 BASIC10.1□□□□□ -0.79
Ubr4A2AN08 Flg-207ENSMUST00000180293 768 ntAPPRIS ALT2 BASIC10.1□□□□□ -0.79
Ubr4A2AN08 Aga-201ENSMUST00000033920 1181 ntAPPRIS P3 TSL 1 (best) BASIC10.1□□□□□ -0.79
Ubr4A2AN08 Rpl39l-201ENSMUST00000044103 805 ntAPPRIS P1 TSL 1 (best) BASIC10.1□□□□□ -0.79
Ubr4A2AN08 Hdac2-201ENSMUST00000019911 2005 ntAPPRIS P1 TSL 1 (best) BASIC10.1□□□□□ -0.79
Ubr4A2AN08 Rhbdl1-202ENSMUST00000183929 1349 ntTSL 5 BASIC10.1□□□□□ -0.79
Ubr4A2AN08 Gm42699-201ENSMUST00000198104 1657 ntBASIC10.1□□□□□ -0.79
Ubr4A2AN08 Rab7-205ENSMUST00000113600 2159 ntAPPRIS P1 TSL 1 (best) BASIC10.1□□□□□ -0.79
Ubr4A2AN08 Kansl2-201ENSMUST00000023727 2311 ntAPPRIS ALT2 TSL 5 BASIC10.1□□□□□ -0.79
Ubr4A2AN08 Gm42911-201ENSMUST00000199360 1630 ntBASIC10.1□□□□□ -0.79
Ubr4A2AN08 Smkr-ps-202ENSMUST00000141679 901 ntTSL 1 (best) BASIC10.1□□□□□ -0.79
Ubr4A2AN08 4930544I03Rik-201ENSMUST00000181184 1276 ntTSL 1 (best) BASIC10.1□□□□□ -0.79
Ubr4A2AN08 Gm7370-201ENSMUST00000219471 767 ntBASIC10.1□□□□□ -0.79
Ubr4A2AN08 Etfb-201ENSMUST00000004729 893 ntAPPRIS P1 TSL 1 (best) BASIC10.1□□□□□ -0.79
Ubr4A2AN08 Tpsb2-201ENSMUST00000069616 1081 ntAPPRIS P1 TSL 1 (best) BASIC10.1□□□□□ -0.79
Ubr4A2AN08 Kctd20-201ENSMUST00000057174 2368 ntAPPRIS P1 TSL 1 (best) BASIC10.1□□□□□ -0.79
Ubr4A2AN08 Tead1-203ENSMUST00000084705 2543 ntAPPRIS ALT1 TSL 1 (best) BASIC10.1□□□□□ -0.79
Ubr4A2AN08 Epo-203ENSMUST00000111039 706 ntAPPRIS ALT2 TSL 1 (best) BASIC10.09□□□□□ -0.79
Ubr4A2AN08 S100a16-202ENSMUST00000098911 1127 ntAPPRIS P1 TSL 1 (best) BASIC10.09□□□□□ -0.79
Ubr4A2AN08 Carm1-203ENSMUST00000115395 3152 ntAPPRIS ALT2 TSL 1 (best) BASIC10.09□□□□□ -0.79
Ubr4A2AN08 Gm19569-202ENSMUST00000184658 1305 ntTSL 2 BASIC10.09□□□□□ -0.79
Ubr4A2AN08 March9-201ENSMUST00000040307 3037 ntAPPRIS P1 TSL 1 (best) BASIC10.09□□□□□ -0.79
Ubr4A2AN08 2010016I18Rik-204ENSMUST00000190356 1562 ntTSL 1 (best) BASIC10.09□□□□□ -0.79
Ubr4A2AN08 Ap4s1-201ENSMUST00000021338 1035 ntAPPRIS P1 TSL 1 (best) BASIC10.09□□□□□ -0.79
Ubr4A2AN08 D230030E09Rik-201ENSMUST00000222459 884 ntTSL 1 (best) BASIC10.09□□□□□ -0.79
Ubr4A2AN08 Gpatch2-201ENSMUST00000044812 1639 ntTSL 1 (best) BASIC10.09□□□□□ -0.79
Ubr4A2AN08 Ggnbp2-202ENSMUST00000100686 2275 ntTSL 5 BASIC10.09□□□□□ -0.79
Ubr4A2AN08 Usf2-202ENSMUST00000108119 849 ntTSL 5 BASIC10.09□□□□□ -0.79
Ubr4A2AN08 Krtap1-5-201ENSMUST00000054532 1041 ntAPPRIS P1 BASIC10.09□□□□□ -0.79
Ubr4A2AN08 Pfdn4-201ENSMUST00000063682 935 ntAPPRIS P1 TSL 1 (best) BASIC10.09□□□□□ -0.79
Ubr4A2AN08 Ears2-201ENSMUST00000033159 2046 ntAPPRIS P1 TSL 1 (best) BASIC10.09□□□□□ -0.79
Ubr4A2AN08 Egr4-201ENSMUST00000095759 2148 ntAPPRIS P1 TSL 1 (best) BASIC10.09□□□□□ -0.79
Ubr4A2AN08 Polg2-201ENSMUST00000021060 1506 ntAPPRIS P1 TSL 1 (best) BASIC10.09□□□□□ -0.79
Ubr4A2AN08 Scml4-203ENSMUST00000105495 1033 ntTSL 1 (best) BASIC10.08□□□□□ -0.8
Ubr4A2AN08 Mir3081-201ENSMUST00000175305 84 ntBASIC10.08□□□□□ -0.8
Ubr4A2AN08 Traf3ip1-203ENSMUST00000189341 2257 ntAPPRIS ALT2 TSL 5 BASIC10.08□□□□□ -0.8
Ubr4A2AN08 Fastk-201ENSMUST00000030800 1893 ntAPPRIS P2 TSL 1 (best) BASIC10.08□□□□□ -0.8
Ubr4A2AN08 Nat14-201ENSMUST00000047309 1612 ntAPPRIS P1 TSL 1 (best) BASIC10.08□□□□□ -0.8
Ubr4A2AN08 Spast-202ENSMUST00000224711 2066 ntAPPRIS ALT2 BASIC10.08□□□□□ -0.8
Retrieved 100 of 76,532 protein–RNA pairs in 21.8 ms