Protein–RNA interactions for Protein: A0N8R0

Trav12d-1, T cell receptor alpha variable 12D-1 (Fragment), mousemouse

Predictions only

Length 115 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav12d-1A0N8R0 Chst7-201ENSMUST00000044138 2206 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Trav12d-1A0N8R0 5330438D12Rik-201ENSMUST00000064101 2229 ntBASIC15.19■□□□□ 0.02
Trav12d-1A0N8R0 Ccdc102a-201ENSMUST00000077955 2304 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Trav12d-1A0N8R0 Vapa-201ENSMUST00000024897 1640 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Trav12d-1A0N8R0 Gm10941-201ENSMUST00000105408 708 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
Trav12d-1A0N8R0 Zfp963-202ENSMUST00000154063 640 ntTSL 3 BASIC15.19■□□□□ 0.02
Trav12d-1A0N8R0 Kmt5b-201ENSMUST00000005518 1283 ntAPPRIS ALT2 TSL 5 BASIC15.19■□□□□ 0.02
Trav12d-1A0N8R0 9330171B17Rik-201ENSMUST00000035939 2073 ntBASIC15.19■□□□□ 0.02
Trav12d-1A0N8R0 Pgs1-203ENSMUST00000132676 2863 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Trav12d-1A0N8R0 3010003L21Rik-201ENSMUST00000047953 1729 ntTSL 5 BASIC15.19■□□□□ 0.02
Trav12d-1A0N8R0 Marcks-201ENSMUST00000092584 4048 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Trav12d-1A0N8R0 Tekt5-201ENSMUST00000043415 1803 ntAPPRIS ALT2 TSL 1 (best) BASIC15.19■□□□□ 0.02
Trav12d-1A0N8R0 Gm10300-201ENSMUST00000094662 2296 ntAPPRIS P1 BASIC15.19■□□□□ 0.02
Trav12d-1A0N8R0 Gm28523-201ENSMUST00000190040 1588 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
Trav12d-1A0N8R0 Kat14-201ENSMUST00000028911 3801 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Trav12d-1A0N8R0 Arx-201ENSMUST00000046565 2881 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Trav12d-1A0N8R0 Klhl2-201ENSMUST00000034017 3412 ntAPPRIS P2 TSL 1 (best) BASIC15.18■□□□□ 0.02
Trav12d-1A0N8R0 St7l-201ENSMUST00000059271 5728 ntAPPRIS P3 TSL 1 (best) BASIC15.18■□□□□ 0.02
Trav12d-1A0N8R0 Trak1-209ENSMUST00000210798 5363 ntAPPRIS ALT2 TSL 1 (best) BASIC15.18■□□□□ 0.02
Trav12d-1A0N8R0 Nadk2-201ENSMUST00000067760 3731 ntAPPRIS P5 TSL 5 BASIC15.18■□□□□ 0.02
Trav12d-1A0N8R0 Krt82-201ENSMUST00000023713 2087 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Trav12d-1A0N8R0 Espn-203ENSMUST00000070018 1618 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
Trav12d-1A0N8R0 Matk-205ENSMUST00000121205 1841 ntAPPRIS ALT2 TSL 1 (best) BASIC15.18■□□□□ 0.02
Trav12d-1A0N8R0 Tpra1-201ENSMUST00000055022 1820 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Trav12d-1A0N8R0 Nsmf-205ENSMUST00000114386 2685 ntTSL 5 BASIC15.18■□□□□ 0.02
Trav12d-1A0N8R0 Elac2-201ENSMUST00000071891 2771 ntAPPRIS P2 TSL 1 (best) BASIC15.18■□□□□ 0.02
Trav12d-1A0N8R0 Fam129b-201ENSMUST00000028135 3714 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Trav12d-1A0N8R0 Alyref2-201ENSMUST00000081527 1273 ntAPPRIS P1 BASIC15.18■□□□□ 0.02
Trav12d-1A0N8R0 Hcn2-202ENSMUST00000099513 3195 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Trav12d-1A0N8R0 Ppa1-201ENSMUST00000020286 1364 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Trav12d-1A0N8R0 Mgme1-203ENSMUST00000110028 2308 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Trav12d-1A0N8R0 4930412F12Rik-201ENSMUST00000211700 1471 ntBASIC15.18■□□□□ 0.02
Trav12d-1A0N8R0 Cebpg-202ENSMUST00000130491 4709 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Trav12d-1A0N8R0 Dmtn-210ENSMUST00000228824 2377 ntBASIC15.18■□□□□ 0.02
Trav12d-1A0N8R0 Asap2-202ENSMUST00000064595 5678 ntAPPRIS P4 TSL 5 BASIC15.18■□□□□ 0.02
Trav12d-1A0N8R0 Azi2-207ENSMUST00000134433 2499 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
Trav12d-1A0N8R0 Foxp1-230ENSMUST00000177437 2468 ntAPPRIS P2 TSL 1 (best) BASIC15.18■□□□□ 0.02
Trav12d-1A0N8R0 Rad1-201ENSMUST00000022856 1514 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Trav12d-1A0N8R0 Krt4-201ENSMUST00000023797 2132 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Trav12d-1A0N8R0 Schip1-201ENSMUST00000029346 2201 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
Trav12d-1A0N8R0 Dip2c-203ENSMUST00000174552 8023 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Trav12d-1A0N8R0 Tagln-201ENSMUST00000034590 1595 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Trav12d-1A0N8R0 Wnk2-205ENSMUST00000110097 6882 ntAPPRIS ALT2 TSL 5 BASIC15.17■□□□□ 0.02
Trav12d-1A0N8R0 Wnk2-203ENSMUST00000091623 6897 ntAPPRIS P4 TSL 5 BASIC15.17■□□□□ 0.02
Trav12d-1A0N8R0 Prodh-206ENSMUST00000139861 677 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
Trav12d-1A0N8R0 D630036H23Rik-201ENSMUST00000171007 940 ntAPPRIS P1 BASIC15.17■□□□□ 0.02
Trav12d-1A0N8R0 Alad-201ENSMUST00000030090 1206 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Trav12d-1A0N8R0 Slc25a41-201ENSMUST00000058661 1225 ntAPPRIS P3 TSL 1 (best) BASIC15.17■□□□□ 0.02
Trav12d-1A0N8R0 Tmem62-201ENSMUST00000067582 2921 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Trav12d-1A0N8R0 Lca5l-201ENSMUST00000054855 2508 ntAPPRIS P2 TSL 1 (best) BASIC15.17■□□□□ 0.02
Trav12d-1A0N8R0 Leng1-201ENSMUST00000019878 2222 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Trav12d-1A0N8R0 Hpn-202ENSMUST00000108102 1830 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
Trav12d-1A0N8R0 Hpca-204ENSMUST00000116444 1847 ntAPPRIS P1 TSL 5 BASIC15.17■□□□□ 0.02
Trav12d-1A0N8R0 Tyw5-209ENSMUST00000162686 1847 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Trav12d-1A0N8R0 Cd47-201ENSMUST00000084838 5277 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Trav12d-1A0N8R0 Pqlc1-207ENSMUST00000140594 2356 ntAPPRIS P3 TSL 1 (best) BASIC15.17■□□□□ 0.02
Trav12d-1A0N8R0 Mgll-202ENSMUST00000113581 1308 ntTSL 5 BASIC15.17■□□□□ 0.02
Trav12d-1A0N8R0 Trim58-201ENSMUST00000075084 2192 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Trav12d-1A0N8R0 Nkd1-201ENSMUST00000034086 3035 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Trav12d-1A0N8R0 Cxxc1-201ENSMUST00000025444 2618 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Trav12d-1A0N8R0 Cdca4-201ENSMUST00000062092 2425 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Trav12d-1A0N8R0 Bcl9l-206ENSMUST00000220303 5760 ntAPPRIS ALT2 TSL 1 (best) BASIC15.16■□□□□ 0.02
Trav12d-1A0N8R0 Krcc1-203ENSMUST00000204436 1687 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Trav12d-1A0N8R0 Pigw-201ENSMUST00000067058 2675 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Trav12d-1A0N8R0 Cnn3-201ENSMUST00000029773 2049 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Trav12d-1A0N8R0 Laptm4b-201ENSMUST00000022867 1902 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Trav12d-1A0N8R0 Mdfi-201ENSMUST00000035375 1371 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Trav12d-1A0N8R0 Mid1-203ENSMUST00000079443 2815 ntTSL 5 BASIC15.16■□□□□ 0.02
Trav12d-1A0N8R0 Gm12660-201ENSMUST00000123764 664 ntTSL 3 BASIC15.16■□□□□ 0.02
Trav12d-1A0N8R0 Siglec15-201ENSMUST00000170760 1156 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Trav12d-1A0N8R0 Sumf1-206ENSMUST00000172188 723 ntTSL 5 BASIC15.16■□□□□ 0.02
Trav12d-1A0N8R0 Golgb1-201ENSMUST00000023534 498 ntBASIC15.16■□□□□ 0.02
Trav12d-1A0N8R0 Rab4b-201ENSMUST00000093040 1192 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Trav12d-1A0N8R0 6330562C20Rik-201ENSMUST00000098867 784 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
Trav12d-1A0N8R0 Zfp78-205ENSMUST00000208030 2169 ntAPPRIS ALT2 TSL 1 (best) BASIC15.16■□□□□ 0.02
Trav12d-1A0N8R0 Anks1b-208ENSMUST00000182053 1649 ntTSL 5 BASIC15.16■□□□□ 0.02
Trav12d-1A0N8R0 Nova2-202ENSMUST00000220302 8372 ntAPPRIS P1 TSL 5 BASIC15.16■□□□□ 0.02
Trav12d-1A0N8R0 Nova2-201ENSMUST00000032571 8372 ntTSL 5 BASIC15.16■□□□□ 0.02
Trav12d-1A0N8R0 Wtap-205ENSMUST00000160781 2442 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
Trav12d-1A0N8R0 Alg1-201ENSMUST00000049207 1669 ntAPPRIS ALT2 TSL 2 BASIC15.16■□□□□ 0.02
Trav12d-1A0N8R0 Gpc3-202ENSMUST00000114857 1880 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
Trav12d-1A0N8R0 4930539J05Rik-202ENSMUST00000182865 511 ntTSL 2 BASIC15.15■□□□□ 0.02
Trav12d-1A0N8R0 Eid2b-201ENSMUST00000094651 1751 ntAPPRIS P1 BASIC15.15■□□□□ 0.02
Trav12d-1A0N8R0 Actl6a-201ENSMUST00000029214 2010 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Trav12d-1A0N8R0 Rce1-201ENSMUST00000025823 1402 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Trav12d-1A0N8R0 Pkp4-210ENSMUST00000168631 4484 ntAPPRIS ALT1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Trav12d-1A0N8R0 Jag1-201ENSMUST00000028735 5612 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Trav12d-1A0N8R0 Pacsin3-203ENSMUST00000111349 1993 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Trav12d-1A0N8R0 Atf5-202ENSMUST00000107893 1735 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Trav12d-1A0N8R0 Gm45141-201ENSMUST00000206502 1888 ntBASIC15.14■□□□□ 0.01
Trav12d-1A0N8R0 Gorasp2-202ENSMUST00000112201 2417 ntAPPRIS ALT2 TSL 1 (best) BASIC15.14■□□□□ 0.01
Trav12d-1A0N8R0 Zswim8-208ENSMUST00000224751 5951 ntAPPRIS ALT2 BASIC15.14■□□□□ 0.01
Trav12d-1A0N8R0 Vps9d1-203ENSMUST00000122363 2952 ntAPPRIS P3 TSL 1 (best) BASIC15.14■□□□□ 0.01
Trav12d-1A0N8R0 Chd5-202ENSMUST00000030775 9486 ntAPPRIS P3 TSL 5 BASIC15.14■□□□□ 0.01
Trav12d-1A0N8R0 Sh3bp1-202ENSMUST00000061239 1917 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
Trav12d-1A0N8R0 Nptxr-201ENSMUST00000023057 5004 ntAPPRIS ALT2 TSL 1 (best) BASIC15.14■□□□□ 0.01
Trav12d-1A0N8R0 Naa20-202ENSMUST00000110000 1142 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Trav12d-1A0N8R0 Gm11837-201ENSMUST00000136992 876 ntTSL 2 BASIC15.14■□□□□ 0.01
Trav12d-1A0N8R0 Cyc1-201ENSMUST00000023210 1194 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Trav12d-1A0N8R0 Cldn23-201ENSMUST00000060128 1848 ntAPPRIS P1 BASIC15.14■□□□□ 0.01
Retrieved 100 of 76,532 protein–RNA pairs in 27.6 ms