Protein–RNA interactions for Protein: A0A140T8P8

Trbv17, T cell receptor beta, variable 17 (Fragment), mousemouse

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trbv17A0A140T8P8 Mtus2-205ENSMUST00000110515 1792 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Trbv17A0A140T8P8 Phax-202ENSMUST00000130163 1386 ntAPPRIS ALT2 TSL 1 (best) BASIC14.47□□□□□ -0.09
Trbv17A0A140T8P8 Dvl3-203ENSMUST00000171572 2493 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
Trbv17A0A140T8P8 Akt2-205ENSMUST00000108344 4544 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Trbv17A0A140T8P8 Spg7-211ENSMUST00000153285 2481 ntAPPRIS ALT2 TSL 5 BASIC14.46□□□□□ -0.09
Trbv17A0A140T8P8 Cdc34b-202ENSMUST00000188741 1252 ntBASIC14.46□□□□□ -0.09
Trbv17A0A140T8P8 Cdc34-201ENSMUST00000020550 1266 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Trbv17A0A140T8P8 Cdc34b-201ENSMUST00000021240 1233 ntAPPRIS P1 BASIC14.46□□□□□ -0.09
Trbv17A0A140T8P8 Igfbp6-201ENSMUST00000023807 1112 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Trbv17A0A140T8P8 Maff-202ENSMUST00000163691 1905 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Trbv17A0A140T8P8 Clasp2-211ENSMUST00000216817 2234 ntTSL 1 (best) BASIC14.46□□□□□ -0.1
Trbv17A0A140T8P8 Pde3b-201ENSMUST00000032909 6573 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.1
Trbv17A0A140T8P8 D030062O11Rik-201ENSMUST00000192660 2806 ntBASIC14.46□□□□□ -0.1
Trbv17A0A140T8P8 Nfe2-201ENSMUST00000075192 1697 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.1
Trbv17A0A140T8P8 Hoxa11os-201ENSMUST00000134512 1839 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
Trbv17A0A140T8P8 Ddah2-201ENSMUST00000007255 1342 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Trbv17A0A140T8P8 Glrb-201ENSMUST00000029654 3029 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Trbv17A0A140T8P8 Akt1s1-203ENSMUST00000107882 1160 ntAPPRIS ALT2 TSL 3 BASIC14.45□□□□□ -0.1
Trbv17A0A140T8P8 Hat1-202ENSMUST00000112122 1899 ntAPPRIS ALT2 TSL 5 BASIC14.45□□□□□ -0.1
Trbv17A0A140T8P8 Far2os2-201ENSMUST00000149815 980 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
Trbv17A0A140T8P8 Gm13790-201ENSMUST00000156209 473 ntTSL 3 BASIC14.45□□□□□ -0.1
Trbv17A0A140T8P8 Gfi1-203ENSMUST00000159164 2648 ntAPPRIS P3 TSL 1 (best) BASIC14.45□□□□□ -0.1
Trbv17A0A140T8P8 Jsrp1-203ENSMUST00000181039 1108 ntAPPRIS P2 TSL 1 (best) BASIC14.45□□□□□ -0.1
Trbv17A0A140T8P8 Gm43545-201ENSMUST00000196765 2779 ntBASIC14.45□□□□□ -0.1
Trbv17A0A140T8P8 Gm43060-201ENSMUST00000200621 289 ntBASIC14.45□□□□□ -0.1
Trbv17A0A140T8P8 Rbp4-201ENSMUST00000025951 1243 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
Trbv17A0A140T8P8 Rras-201ENSMUST00000044111 995 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Trbv17A0A140T8P8 Chtop-202ENSMUST00000049937 2012 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Trbv17A0A140T8P8 Slc35d3-201ENSMUST00000059805 2630 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Trbv17A0A140T8P8 1700012B09Rik-201ENSMUST00000060330 688 ntAPPRIS P2 TSL 1 (best) BASIC14.45□□□□□ -0.1
Trbv17A0A140T8P8 Cldn23-201ENSMUST00000060128 1848 ntAPPRIS P1 BASIC14.45□□□□□ -0.1
Trbv17A0A140T8P8 Cracr2b-201ENSMUST00000053670 1698 ntAPPRIS P2 TSL 1 (best) BASIC14.45□□□□□ -0.1
Trbv17A0A140T8P8 Zdhhc4-201ENSMUST00000001900 1364 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Trbv17A0A140T8P8 Eefsec-206ENSMUST00000205179 2208 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
Trbv17A0A140T8P8 Ncoa5-202ENSMUST00000121377 2930 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
Trbv17A0A140T8P8 Krt76-201ENSMUST00000100179 2312 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Trbv17A0A140T8P8 Zfp771-201ENSMUST00000052509 1484 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Trbv17A0A140T8P8 Gjc2-201ENSMUST00000108790 2169 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Trbv17A0A140T8P8 Cnbp-208ENSMUST00000204653 2175 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
Trbv17A0A140T8P8 Cnbp-201ENSMUST00000032138 2178 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
Trbv17A0A140T8P8 B4galt5-201ENSMUST00000109221 4210 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Trbv17A0A140T8P8 Rab3il1-201ENSMUST00000113161 2225 ntAPPRIS P3 TSL 5 BASIC14.44□□□□□ -0.1
Trbv17A0A140T8P8 Gm11691-201ENSMUST00000130963 658 ntTSL 2 BASIC14.44□□□□□ -0.1
Trbv17A0A140T8P8 Gm13620-201ENSMUST00000131198 511 ntTSL 3 BASIC14.44□□□□□ -0.1
Trbv17A0A140T8P8 Cisd1-201ENSMUST00000045887 1084 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Trbv17A0A140T8P8 Art5-201ENSMUST00000094128 1518 ntAPPRIS P1 TSL 2 BASIC14.44□□□□□ -0.1
Trbv17A0A140T8P8 Kat14-201ENSMUST00000028911 3801 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Trbv17A0A140T8P8 Gm13830-204ENSMUST00000149609 1851 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
Trbv17A0A140T8P8 Map3k5-201ENSMUST00000095806 5450 ntAPPRIS P2 TSL 1 (best) BASIC14.44□□□□□ -0.1
Trbv17A0A140T8P8 Trmt61a-202ENSMUST00000168338 2131 ntAPPRIS P1 TSL 5 BASIC14.44□□□□□ -0.1
Trbv17A0A140T8P8 Foxa2-201ENSMUST00000047315 2128 ntAPPRIS P3 TSL 1 (best) BASIC14.44□□□□□ -0.1
Trbv17A0A140T8P8 Lypla2-202ENSMUST00000105852 1588 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Trbv17A0A140T8P8 Shisa4-201ENSMUST00000041240 1763 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Trbv17A0A140T8P8 1810022K09Rik-201ENSMUST00000108365 559 ntAPPRIS ALT2 TSL 1 (best) BASIC14.43□□□□□ -0.1
Trbv17A0A140T8P8 Ypel3-210ENSMUST00000170882 1050 ntAPPRIS P1 TSL 3 BASIC14.43□□□□□ -0.1
Trbv17A0A140T8P8 Gm21168-201ENSMUST00000199646 1096 ntBASIC14.43□□□□□ -0.1
Trbv17A0A140T8P8 Cstf2-202ENSMUST00000113286 2717 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
Trbv17A0A140T8P8 Sigmar1-201ENSMUST00000059354 1640 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Trbv17A0A140T8P8 Matk-205ENSMUST00000121205 1841 ntAPPRIS ALT2 TSL 1 (best) BASIC14.43□□□□□ -0.1
Trbv17A0A140T8P8 Itgb4-205ENSMUST00000106461 6208 ntAPPRIS ALT2 TSL 5 BASIC14.43□□□□□ -0.1
Trbv17A0A140T8P8 Sstr1-201ENSMUST00000044299 2014 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Trbv17A0A140T8P8 Garem1-201ENSMUST00000049260 4923 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Trbv17A0A140T8P8 Arhgap8-207ENSMUST00000172307 1544 ntAPPRIS P1 TSL 5 BASIC14.42□□□□□ -0.1
Trbv17A0A140T8P8 Diaph1-205ENSMUST00000115634 5666 ntAPPRIS P3 TSL 5 BASIC14.42□□□□□ -0.1
Trbv17A0A140T8P8 Emc6-202ENSMUST00000108480 563 ntAPPRIS P1 TSL 2 BASIC14.42□□□□□ -0.1
Trbv17A0A140T8P8 AB124611-203ENSMUST00000173769 1188 ntAPPRIS P3 TSL 1 (best) BASIC14.42□□□□□ -0.1
Trbv17A0A140T8P8 Plac9b-203ENSMUST00000184142 1040 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Trbv17A0A140T8P8 Hgfac-206ENSMUST00000202573 434 ntTSL 5 BASIC14.42□□□□□ -0.1
Trbv17A0A140T8P8 Pop7-201ENSMUST00000031728 881 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Trbv17A0A140T8P8 Acbd6-202ENSMUST00000080138 993 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
Trbv17A0A140T8P8 Smap2-201ENSMUST00000043200 2905 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Trbv17A0A140T8P8 AC161052.2-201ENSMUST00000220969 1375 ntTSL 5 BASIC14.42□□□□□ -0.1
Trbv17A0A140T8P8 Fzd2-201ENSMUST00000057893 3663 ntAPPRIS P1 BASIC14.42□□□□□ -0.1
Trbv17A0A140T8P8 Ndufaf1-202ENSMUST00000110801 1478 ntAPPRIS ALT2 TSL 1 (best) BASIC14.42□□□□□ -0.1
Trbv17A0A140T8P8 Ank1-209ENSMUST00000121802 8218 ntAPPRIS ALT2 TSL 1 (best) BASIC14.42□□□□□ -0.1
Trbv17A0A140T8P8 Rcor3-203ENSMUST00000192128 1578 ntAPPRIS P3 TSL 1 (best) BASIC14.42□□□□□ -0.1
Trbv17A0A140T8P8 Wac-207ENSMUST00000167020 5208 ntAPPRIS P3 TSL 1 (best) BASIC14.42□□□□□ -0.1
Trbv17A0A140T8P8 Ttc39a-203ENSMUST00000106619 1778 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
Trbv17A0A140T8P8 Eif2b4-203ENSMUST00000166769 1878 ntTSL 5 BASIC14.42□□□□□ -0.1
Trbv17A0A140T8P8 Mcub-201ENSMUST00000029624 1318 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Trbv17A0A140T8P8 Ppp1r3f-205ENSMUST00000150787 4760 ntAPPRIS ALT2 TSL 1 (best) BASIC14.41□□□□□ -0.1
Trbv17A0A140T8P8 Mob2-205ENSMUST00000211000 1646 ntTSL 5 BASIC14.41□□□□□ -0.1
Trbv17A0A140T8P8 Ebf3-204ENSMUST00000169486 4994 ntAPPRIS ALT1 TSL 5 BASIC14.41□□□□□ -0.1
Trbv17A0A140T8P8 Col15a1-202ENSMUST00000102917 5172 ntAPPRIS P2 TSL 1 (best) BASIC14.41□□□□□ -0.1
Trbv17A0A140T8P8 Aire-203ENSMUST00000105396 1749 ntAPPRIS ALT2 TSL 1 (best) BASIC14.41□□□□□ -0.1
Trbv17A0A140T8P8 Aire-214ENSMUST00000154374 1712 ntAPPRIS ALT2 TSL 1 (best) BASIC14.41□□□□□ -0.1
Trbv17A0A140T8P8 Aire-215ENSMUST00000155021 1737 ntAPPRIS ALT2 TSL 1 (best) BASIC14.41□□□□□ -0.1
Trbv17A0A140T8P8 Olfm2-204ENSMUST00000217198 2005 ntAPPRIS ALT2 TSL 3 BASIC14.41□□□□□ -0.1
Trbv17A0A140T8P8 Mall-201ENSMUST00000028856 2006 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Trbv17A0A140T8P8 Man1c1-201ENSMUST00000038628 4285 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Trbv17A0A140T8P8 Tm2d1-202ENSMUST00000102793 1027 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Trbv17A0A140T8P8 Hist1h2bp-201ENSMUST00000102982 469 ntAPPRIS P1 BASIC14.41□□□□□ -0.1
Trbv17A0A140T8P8 Cnpy3-202ENSMUST00000121671 561 ntTSL 2 BASIC14.41□□□□□ -0.1
Trbv17A0A140T8P8 Gclm-206ENSMUST00000178826 1002 ntAPPRIS P1 TSL 5 BASIC14.41□□□□□ -0.1
Trbv17A0A140T8P8 Fam96b-201ENSMUST00000093234 639 ntTSL 5 BASIC14.41□□□□□ -0.1
Trbv17A0A140T8P8 Hexa-201ENSMUST00000026262 1996 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Trbv17A0A140T8P8 Ptges2-201ENSMUST00000028162 4978 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Trbv17A0A140T8P8 Sqstm1-202ENSMUST00000102774 2037 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Trbv17A0A140T8P8 D830050J10Rik-202ENSMUST00000203858 1813 ntBASIC14.41□□□□□ -0.1
Trbv17A0A140T8P8 D030056L22Rik-201ENSMUST00000055792 1631 ntAPPRIS P2 TSL 1 (best) BASIC14.41□□□□□ -0.1
Retrieved 100 of 76,532 protein–RNA pairs in 18.8 ms