Protein–RNA interactions for Protein: A0A140LIX9

Cfap99, Cilia and flagella-associated protein 99, mousemouse

Predictions only

Length 648 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cfap99A0A140LIX9 Gm10616-201ENSMUST00000205285 2127 ntBASIC22.56■■□□□ 1.2
Cfap99A0A140LIX9 Rab34-209ENSMUST00000207728 567 ntTSL 2 BASIC22.56■■□□□ 1.2
Cfap99A0A140LIX9 Vax2-201ENSMUST00000037807 1242 ntAPPRIS P1 TSL 1 (best) BASIC22.56■■□□□ 1.2
Cfap99A0A140LIX9 Dcbld1-203ENSMUST00000218582 2795 ntTSL 1 (best) BASIC22.55■■□□□ 1.2
Cfap99A0A140LIX9 Trmt61a-202ENSMUST00000168338 2131 ntAPPRIS P1 TSL 5 BASIC22.55■■□□□ 1.2
Cfap99A0A140LIX9 Tmtc1-202ENSMUST00000100772 8269 ntTSL 2 BASIC22.55■■□□□ 1.2
Cfap99A0A140LIX9 1700123O20Rik-201ENSMUST00000038539 1843 ntAPPRIS P1 TSL 1 (best) BASIC22.55■■□□□ 1.2
Cfap99A0A140LIX9 Gm53-201ENSMUST00000129907 1172 ntTSL 2 BASIC22.55■■□□□ 1.2
Cfap99A0A140LIX9 Tnfaip8-208ENSMUST00000148989 1002 ntAPPRIS P1 TSL 2 BASIC22.55■■□□□ 1.2
Cfap99A0A140LIX9 Gm22240-201ENSMUST00000175225 82 ntBASIC22.55■■□□□ 1.2
Cfap99A0A140LIX9 Foxf2-201ENSMUST00000042054 2363 ntAPPRIS P1 TSL 1 (best) BASIC22.55■■□□□ 1.2
Cfap99A0A140LIX9 Rab7-205ENSMUST00000113600 2159 ntAPPRIS P1 TSL 1 (best) BASIC22.55■■□□□ 1.2
Cfap99A0A140LIX9 Slc3a2-201ENSMUST00000010239 1819 ntAPPRIS P3 TSL 1 (best) BASIC22.54■■□□□ 1.2
Cfap99A0A140LIX9 Chtop-202ENSMUST00000049937 2012 ntAPPRIS P1 TSL 1 (best) BASIC22.54■■□□□ 1.2
Cfap99A0A140LIX9 Zfp637-201ENSMUST00000112858 650 ntTSL 2 BASIC22.54■■□□□ 1.2
Cfap99A0A140LIX9 Zfp637-203ENSMUST00000112860 1231 ntTSL 1 (best) BASIC22.54■■□□□ 1.2
Cfap99A0A140LIX9 H2-Q7-201ENSMUST00000071951 1406 ntAPPRIS P2 TSL 1 (best) BASIC22.54■■□□□ 1.2
Cfap99A0A140LIX9 Iqck-206ENSMUST00000208658 2891 ntBASIC22.54■■□□□ 1.2
Cfap99A0A140LIX9 Fam117b-201ENSMUST00000036540 5532 ntAPPRIS P1 TSL 1 (best) BASIC22.54■■□□□ 1.2
Cfap99A0A140LIX9 Qrich1-206ENSMUST00000193258 2291 ntTSL 2 BASIC22.54■■□□□ 1.2
Cfap99A0A140LIX9 Hoxa5-201ENSMUST00000048794 1877 ntAPPRIS P1 TSL 1 (best) BASIC22.54■■□□□ 1.2
Cfap99A0A140LIX9 Fam3c-203ENSMUST00000163963 1617 ntTSL 1 (best) BASIC22.53■■□□□ 1.2
Cfap99A0A140LIX9 Gatad1-201ENSMUST00000007559 2545 ntAPPRIS P2 TSL 1 (best) BASIC22.53■■□□□ 1.2
Cfap99A0A140LIX9 Vegfa-207ENSMUST00000142351 1973 ntAPPRIS ALT2 TSL 1 (best) BASIC22.53■■□□□ 1.2
Cfap99A0A140LIX9 Fam98c-203ENSMUST00000134176 1189 ntTSL 2 BASIC22.53■■□□□ 1.2
Cfap99A0A140LIX9 Gm6365-201ENSMUST00000054711 744 ntBASIC22.53■■□□□ 1.2
Cfap99A0A140LIX9 Pus1-201ENSMUST00000031481 1563 ntAPPRIS ALT2 TSL 1 (best) BASIC22.53■■□□□ 1.2
Cfap99A0A140LIX9 Spsb3-203ENSMUST00000117890 1641 ntAPPRIS ALT2 TSL 1 (best) BASIC22.53■■□□□ 1.2
Cfap99A0A140LIX9 Sigmar1-201ENSMUST00000059354 1640 ntAPPRIS P1 TSL 1 (best) BASIC22.53■■□□□ 1.2
Cfap99A0A140LIX9 Tgfbr3l-201ENSMUST00000110993 1075 ntAPPRIS P1 TSL 5 BASIC22.52■■□□□ 1.2
Cfap99A0A140LIX9 CT030146.1-201ENSMUST00000220919 217 ntBASIC22.52■■□□□ 1.2
Cfap99A0A140LIX9 Ogfod2-202ENSMUST00000119269 1474 ntTSL 1 (best) BASIC22.52■■□□□ 1.2
Cfap99A0A140LIX9 Chd5-205ENSMUST00000164662 9375 ntAPPRIS ALT2 TSL 1 (best) BASIC22.52■■□□□ 1.2
Cfap99A0A140LIX9 Maff-202ENSMUST00000163691 1905 ntAPPRIS P1 TSL 1 (best) BASIC22.51■■□□□ 1.19
Cfap99A0A140LIX9 Ahcyl1-201ENSMUST00000029490 3863 ntAPPRIS P1 TSL 1 (best) BASIC22.51■■□□□ 1.19
Cfap99A0A140LIX9 Ltbr-201ENSMUST00000032489 2107 ntAPPRIS P1 TSL 1 (best) BASIC22.51■■□□□ 1.19
Cfap99A0A140LIX9 Nphp3-201ENSMUST00000035167 5899 ntAPPRIS P2 TSL 1 (best) BASIC22.51■■□□□ 1.19
Cfap99A0A140LIX9 Gm16764-202ENSMUST00000148931 433 ntTSL 5 BASIC22.51■■□□□ 1.19
Cfap99A0A140LIX9 Tpsg1-204ENSMUST00000160920 867 ntTSL 3 BASIC22.51■■□□□ 1.19
Cfap99A0A140LIX9 Gm5408-201ENSMUST00000197998 747 ntBASIC22.51■■□□□ 1.19
Cfap99A0A140LIX9 Gm44965-201ENSMUST00000204121 360 ntAPPRIS P1 TSL 3 BASIC22.51■■□□□ 1.19
Cfap99A0A140LIX9 Cck-204ENSMUST00000216138 799 ntTSL 1 (best) BASIC22.51■■□□□ 1.19
Cfap99A0A140LIX9 Ankle2-201ENSMUST00000031474 5215 ntAPPRIS ALT2 TSL 1 (best) BASIC22.51■■□□□ 1.19
Cfap99A0A140LIX9 Purb-201ENSMUST00000179343 8319 ntAPPRIS P1 BASIC22.51■■□□□ 1.19
Cfap99A0A140LIX9 Samd10-201ENSMUST00000060173 2164 ntAPPRIS P1 TSL 1 (best) BASIC22.5■■□□□ 1.19
Cfap99A0A140LIX9 Nat14-201ENSMUST00000047309 1612 ntAPPRIS P1 TSL 1 (best) BASIC22.5■■□□□ 1.19
Cfap99A0A140LIX9 Tsc22d4-205ENSMUST00000110985 790 ntAPPRIS ALT2 TSL 2 BASIC22.5■■□□□ 1.19
Cfap99A0A140LIX9 Ptbp3-204ENSMUST00000140925 606 ntTSL 3 BASIC22.5■■□□□ 1.19
Cfap99A0A140LIX9 Gm8520-201ENSMUST00000186517 868 ntBASIC22.5■■□□□ 1.19
Cfap99A0A140LIX9 Rusc2-201ENSMUST00000035645 5300 ntAPPRIS P1 TSL 1 (best) BASIC22.5■■□□□ 1.19
Cfap99A0A140LIX9 Zfyve9-202ENSMUST00000106657 6459 ntAPPRIS P2 TSL 5 BASIC22.5■■□□□ 1.19
Cfap99A0A140LIX9 Wdr41-202ENSMUST00000159647 2289 ntTSL 5 BASIC22.5■■□□□ 1.19
Cfap99A0A140LIX9 Wdr41-206ENSMUST00000167155 2289 ntTSL 1 (best) BASIC22.5■■□□□ 1.19
Cfap99A0A140LIX9 Gm20100-201ENSMUST00000209418 2272 ntBASIC22.5■■□□□ 1.19
Cfap99A0A140LIX9 Gsto2-201ENSMUST00000056159 1351 ntAPPRIS P1 TSL 1 (best) BASIC22.5■■□□□ 1.19
Cfap99A0A140LIX9 Cyp2r1-207ENSMUST00000211506 1887 ntTSL 5 BASIC22.49■■□□□ 1.19
Cfap99A0A140LIX9 Polr3gl-201ENSMUST00000091924 1427 ntAPPRIS P1 TSL 1 (best) BASIC22.49■■□□□ 1.19
Cfap99A0A140LIX9 Mprip-201ENSMUST00000066330 7765 ntAPPRIS ALT2 TSL 5 BASIC22.49■■□□□ 1.19
Cfap99A0A140LIX9 Aadat-201ENSMUST00000079472 1972 ntAPPRIS P2 TSL 1 (best) BASIC22.49■■□□□ 1.19
Cfap99A0A140LIX9 Hist1h4c-201ENSMUST00000102967 820 ntAPPRIS P1 BASIC22.49■■□□□ 1.19
Cfap99A0A140LIX9 Cdh4-203ENSMUST00000108911 1208 ntTSL 1 (best) BASIC22.49■■□□□ 1.19
Cfap99A0A140LIX9 Gm12527-201ENSMUST00000117967 564 ntBASIC22.49■■□□□ 1.19
Cfap99A0A140LIX9 Josd2-204ENSMUST00000118628 864 ntAPPRIS P1 TSL 2 BASIC22.49■■□□□ 1.19
Cfap99A0A140LIX9 Snrpd3-203ENSMUST00000220229 442 ntTSL 3 BASIC22.49■■□□□ 1.19
Cfap99A0A140LIX9 Cnih2-201ENSMUST00000025805 1237 ntAPPRIS P1 TSL 1 (best) BASIC22.49■■□□□ 1.19
Cfap99A0A140LIX9 Josd2-201ENSMUST00000035844 930 ntAPPRIS P1 TSL 1 (best) BASIC22.49■■□□□ 1.19
Cfap99A0A140LIX9 Whamm-201ENSMUST00000165460 3069 ntAPPRIS P1 TSL 1 (best) BASIC22.49■■□□□ 1.19
Cfap99A0A140LIX9 Tatdn2-201ENSMUST00000089018 3096 ntAPPRIS P3 TSL 1 (best) BASIC22.49■■□□□ 1.19
Cfap99A0A140LIX9 Lfng-201ENSMUST00000031555 2305 ntAPPRIS P1 TSL 1 (best) BASIC22.49■■□□□ 1.19
Cfap99A0A140LIX9 Tmem164-201ENSMUST00000087333 5149 ntAPPRIS P1 TSL 1 (best) BASIC22.49■■□□□ 1.19
Cfap99A0A140LIX9 Hs3st4-201ENSMUST00000106437 3189 ntAPPRIS P1 TSL 3 BASIC22.48■■□□□ 1.19
Cfap99A0A140LIX9 Amdhd1-201ENSMUST00000016034 2421 ntAPPRIS P1 TSL 1 (best) BASIC22.48■■□□□ 1.19
Cfap99A0A140LIX9 Gm13148-201ENSMUST00000118892 745 ntBASIC22.48■■□□□ 1.19
Cfap99A0A140LIX9 Camkk2-202ENSMUST00000196742 1084 ntTSL 1 (best) BASIC22.48■■□□□ 1.19
Cfap99A0A140LIX9 CT010467.1-202ENSMUST00000205406 714 ntBASIC22.48■■□□□ 1.19
Cfap99A0A140LIX9 Ubxn1-201ENSMUST00000096255 1041 ntAPPRIS P1 TSL 1 (best) BASIC22.48■■□□□ 1.19
Cfap99A0A140LIX9 Rbmxl1-202ENSMUST00000211719 1622 ntAPPRIS P1 TSL 1 (best) BASIC22.48■■□□□ 1.19
Cfap99A0A140LIX9 Rab7-202ENSMUST00000113596 1657 ntAPPRIS P1 TSL 1 (best) BASIC22.48■■□□□ 1.19
Cfap99A0A140LIX9 Prss32-201ENSMUST00000061725 1689 ntAPPRIS P1 TSL 1 (best) BASIC22.48■■□□□ 1.19
Cfap99A0A140LIX9 Wnk2-202ENSMUST00000049265 6738 ntAPPRIS ALT2 TSL 5 BASIC22.48■■□□□ 1.19
Cfap99A0A140LIX9 Aifm2-201ENSMUST00000067857 1442 ntAPPRIS P1 TSL 1 (best) BASIC22.48■■□□□ 1.19
Cfap99A0A140LIX9 Parp12-201ENSMUST00000038398 3231 ntAPPRIS P1 TSL 1 (best) BASIC22.48■■□□□ 1.19
Cfap99A0A140LIX9 1700067K01Rik-203ENSMUST00000172548 986 ntAPPRIS P2 TSL 1 (best) BASIC22.47■■□□□ 1.19
Cfap99A0A140LIX9 Coro1a-209ENSMUST00000173108 1170 ntTSL 5 BASIC22.47■■□□□ 1.19
Cfap99A0A140LIX9 Gm38205-201ENSMUST00000192243 258 ntBASIC22.47■■□□□ 1.19
Cfap99A0A140LIX9 BC107364-201ENSMUST00000093126 1159 ntAPPRIS P4 TSL 1 (best) BASIC22.47■■□□□ 1.19
Cfap99A0A140LIX9 BC107364-202ENSMUST00000098841 1065 ntAPPRIS ALT2 TSL 1 (best) BASIC22.47■■□□□ 1.19
Cfap99A0A140LIX9 Naglu-201ENSMUST00000001802 2560 ntAPPRIS P1 TSL 1 (best) BASIC22.47■■□□□ 1.19
Cfap99A0A140LIX9 Tcp11-203ENSMUST00000114836 1726 ntAPPRIS ALT2 TSL 1 (best) BASIC22.47■■□□□ 1.19
Cfap99A0A140LIX9 Zfp710-204ENSMUST00000206039 2194 ntAPPRIS ALT2 TSL 1 (best) BASIC22.47■■□□□ 1.19
Cfap99A0A140LIX9 Bend7-204ENSMUST00000184139 2251 ntAPPRIS ALT2 TSL 1 (best) BASIC22.47■■□□□ 1.19
Cfap99A0A140LIX9 Lrrc36-204ENSMUST00000213547 2396 ntAPPRIS ALT2 TSL 5 BASIC22.47■■□□□ 1.19
Cfap99A0A140LIX9 Fbxo27-203ENSMUST00000108281 1948 ntAPPRIS ALT2 TSL 1 (best) BASIC22.47■■□□□ 1.19
Cfap99A0A140LIX9 Tram1-201ENSMUST00000027068 2938 ntAPPRIS P1 TSL 1 (best) BASIC22.47■■□□□ 1.19
Cfap99A0A140LIX9 Traf3-203ENSMUST00000117269 6972 ntTSL 1 (best) BASIC22.46■■□□□ 1.19
Cfap99A0A140LIX9 Gm9725-202ENSMUST00000166229 2326 ntTSL 5 BASIC22.46■■□□□ 1.19
Cfap99A0A140LIX9 Tomm6-201ENSMUST00000113301 594 ntAPPRIS P1 TSL 2 BASIC22.46■■□□□ 1.19
Cfap99A0A140LIX9 Dsg2-203ENSMUST00000121837 953 ntTSL 1 (best) BASIC22.46■■□□□ 1.19
Cfap99A0A140LIX9 Fgf22-203ENSMUST00000219981 1070 ntTSL 1 (best) BASIC22.46■■□□□ 1.19
Cfap99A0A140LIX9 Bmpr1b-202ENSMUST00000098568 1910 ntAPPRIS P1 TSL 1 (best) BASIC22.46■■□□□ 1.19
Retrieved 100 of 76,532 protein–RNA pairs in 20.1 ms