Protein–RNA interactions for Protein: A0A140LI48

Pcdhgb8, Protocadherin gamma subfamily B, 8, mousemouse

Predictions only

Length 931 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhgb8A0A140LI48 Gm43017-201ENSMUST00000198296 752 ntBASIC17■□□□□ 0.31
Pcdhgb8A0A140LI48 Gm9922-201ENSMUST00000066461 435 ntAPPRIS P1 BASIC17■□□□□ 0.31
Pcdhgb8A0A140LI48 Nudt11-201ENSMUST00000103007 3036 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Pcdhgb8A0A140LI48 Gm19439-201ENSMUST00000198195 2273 ntBASIC17■□□□□ 0.31
Pcdhgb8A0A140LI48 Mxi1-201ENSMUST00000003870 5156 ntTSL 1 (best) BASIC17■□□□□ 0.31
Pcdhgb8A0A140LI48 Rnf44-204ENSMUST00000125871 4292 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Pcdhgb8A0A140LI48 Flot2-203ENSMUST00000100784 2699 ntTSL 1 (best) BASIC17■□□□□ 0.31
Pcdhgb8A0A140LI48 Larp1b-202ENSMUST00000048490 2354 ntAPPRIS P2 TSL 1 (best) BASIC17■□□□□ 0.31
Pcdhgb8A0A140LI48 Prkar1b-201ENSMUST00000026973 2637 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Pcdhgb8A0A140LI48 Nhlh1-201ENSMUST00000059794 2464 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Pcdhgb8A0A140LI48 6330403K07Rik-201ENSMUST00000156068 1494 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
Pcdhgb8A0A140LI48 Igsf8-202ENSMUST00000085912 2182 ntAPPRIS P1 TSL 5 BASIC16.99■□□□□ 0.31
Pcdhgb8A0A140LI48 Socs6-203ENSMUST00000125362 2814 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Pcdhgb8A0A140LI48 1700086O06Rik-202ENSMUST00000181871 1564 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
Pcdhgb8A0A140LI48 Gm6627-201ENSMUST00000218299 2386 ntBASIC16.99■□□□□ 0.31
Pcdhgb8A0A140LI48 Slc3a2-201ENSMUST00000010239 1819 ntAPPRIS P3 TSL 1 (best) BASIC16.99■□□□□ 0.31
Pcdhgb8A0A140LI48 Capn10-202ENSMUST00000117814 1268 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
Pcdhgb8A0A140LI48 Gm13790-201ENSMUST00000156209 473 ntTSL 3 BASIC16.99■□□□□ 0.31
Pcdhgb8A0A140LI48 Slc25a41-201ENSMUST00000058661 1225 ntAPPRIS P3 TSL 1 (best) BASIC16.99■□□□□ 0.31
Pcdhgb8A0A140LI48 D830025C05Rik-201ENSMUST00000059474 976 ntBASIC16.99■□□□□ 0.31
Pcdhgb8A0A140LI48 Kctd17-201ENSMUST00000089414 1180 ntAPPRIS ALT2 TSL 5 BASIC16.99■□□□□ 0.31
Pcdhgb8A0A140LI48 Xkr4-201ENSMUST00000070533 3634 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Pcdhgb8A0A140LI48 Pxk-202ENSMUST00000112689 2840 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
Pcdhgb8A0A140LI48 Rhno1-203ENSMUST00000112152 2015 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Pcdhgb8A0A140LI48 Tmprss5-205ENSMUST00000170246 1491 ntAPPRIS ALT2 TSL 1 (best) BASIC16.99■□□□□ 0.31
Pcdhgb8A0A140LI48 Gm5953-201ENSMUST00000220644 2616 ntBASIC16.99■□□□□ 0.31
Pcdhgb8A0A140LI48 Gpr62-201ENSMUST00000164834 1977 ntAPPRIS P1 BASIC16.98■□□□□ 0.31
Pcdhgb8A0A140LI48 Stn1-201ENSMUST00000049369 1992 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Pcdhgb8A0A140LI48 Brpf1-204ENSMUST00000113122 4773 ntAPPRIS ALT2 TSL 5 BASIC16.98■□□□□ 0.31
Pcdhgb8A0A140LI48 Tifa-201ENSMUST00000054483 2245 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Pcdhgb8A0A140LI48 Cacul1-201ENSMUST00000081790 5790 ntAPPRIS P3 TSL 1 (best) BASIC16.98■□□□□ 0.31
Pcdhgb8A0A140LI48 Rab28-203ENSMUST00000201422 1697 ntTSL 5 BASIC16.98■□□□□ 0.31
Pcdhgb8A0A140LI48 BC017158-201ENSMUST00000033044 2627 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Pcdhgb8A0A140LI48 Arl6ip4-201ENSMUST00000031351 1192 ntAPPRIS P2 TSL 1 (best) BASIC16.98■□□□□ 0.31
Pcdhgb8A0A140LI48 Krtap5-4-201ENSMUST00000061403 1046 ntAPPRIS P1 BASIC16.98■□□□□ 0.31
Pcdhgb8A0A140LI48 Ankrd33b-202ENSMUST00000076942 1641 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
Pcdhgb8A0A140LI48 Pxk-201ENSMUST00000036682 2812 ntAPPRIS ALT2 TSL 1 (best) BASIC16.98■□□□□ 0.31
Pcdhgb8A0A140LI48 Arid1a-205ENSMUST00000145664 8187 ntAPPRIS ALT2 TSL 2 BASIC16.98■□□□□ 0.31
Pcdhgb8A0A140LI48 Gm6085-201ENSMUST00000182774 1470 ntBASIC16.98■□□□□ 0.31
Pcdhgb8A0A140LI48 Camk1-201ENSMUST00000032409 1496 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Pcdhgb8A0A140LI48 Rasl10b-202ENSMUST00000108140 3156 ntAPPRIS P1 TSL 2 BASIC16.97■□□□□ 0.31
Pcdhgb8A0A140LI48 Gm5577-201ENSMUST00000134600 1434 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
Pcdhgb8A0A140LI48 Vat1-201ENSMUST00000040430 2766 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Pcdhgb8A0A140LI48 Irgq-201ENSMUST00000049020 6083 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Pcdhgb8A0A140LI48 Clta-202ENSMUST00000107846 1710 ntAPPRIS ALT2 TSL 1 (best) BASIC16.97■□□□□ 0.31
Pcdhgb8A0A140LI48 Meis3-201ENSMUST00000002495 1731 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Pcdhgb8A0A140LI48 Gm12251-201ENSMUST00000117893 792 ntBASIC16.97■□□□□ 0.31
Pcdhgb8A0A140LI48 Rps7-203ENSMUST00000221871 820 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Pcdhgb8A0A140LI48 Fbxo2-201ENSMUST00000047951 1288 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Pcdhgb8A0A140LI48 Krt24-201ENSMUST00000017255 1847 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Pcdhgb8A0A140LI48 Spock1-204ENSMUST00000186271 2005 ntAPPRIS P3 TSL 1 (best) BASIC16.97■□□□□ 0.31
Pcdhgb8A0A140LI48 Ctdsp2-202ENSMUST00000105256 4817 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Pcdhgb8A0A140LI48 Ppp1r3f-201ENSMUST00000115742 3066 ntAPPRIS P3 TSL 1 (best) BASIC16.97■□□□□ 0.31
Pcdhgb8A0A140LI48 Rabgap1l-216ENSMUST00000195442 1877 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
Pcdhgb8A0A140LI48 2310022A10Rik-201ENSMUST00000067386 2701 ntAPPRIS P2 TSL 1 (best) BASIC16.97■□□□□ 0.31
Pcdhgb8A0A140LI48 Stmn4-201ENSMUST00000074523 1303 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
Pcdhgb8A0A140LI48 Gm27045-201ENSMUST00000182145 1402 ntBASIC16.96■□□□□ 0.31
Pcdhgb8A0A140LI48 Map4k5-203ENSMUST00000110570 4498 ntAPPRIS P5 TSL 5 BASIC16.96■□□□□ 0.31
Pcdhgb8A0A140LI48 Mrgprf-202ENSMUST00000117718 1935 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
Pcdhgb8A0A140LI48 Zbtb8a-201ENSMUST00000030610 2321 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
Pcdhgb8A0A140LI48 Khsrp-201ENSMUST00000007814 3990 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
Pcdhgb8A0A140LI48 Tril-201ENSMUST00000127748 5363 ntAPPRIS P1 BASIC16.96■□□□□ 0.31
Pcdhgb8A0A140LI48 Aktip-201ENSMUST00000109609 1171 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
Pcdhgb8A0A140LI48 Selenos-205ENSMUST00000206575 1157 ntAPPRIS ALT1 TSL 2 BASIC16.96■□□□□ 0.31
Pcdhgb8A0A140LI48 Nr2c2ap-201ENSMUST00000095273 1161 ntAPPRIS P2 TSL 1 (best) BASIC16.96■□□□□ 0.31
Pcdhgb8A0A140LI48 Tbcel-201ENSMUST00000066148 5000 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
Pcdhgb8A0A140LI48 Laptm4a-201ENSMUST00000020909 1773 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
Pcdhgb8A0A140LI48 Vegfa-207ENSMUST00000142351 1973 ntAPPRIS ALT2 TSL 1 (best) BASIC16.96■□□□□ 0.31
Pcdhgb8A0A140LI48 Sept9-201ENSMUST00000019038 3784 ntAPPRIS ALT2 TSL 1 (best) BASIC16.96■□□□□ 0.31
Pcdhgb8A0A140LI48 Fgf11-201ENSMUST00000011285 2534 ntTSL 1 (best) BASIC16.96■□□□□ 0.3
Pcdhgb8A0A140LI48 Klc3-201ENSMUST00000047170 1901 ntTSL 1 (best) BASIC16.96■□□□□ 0.3
Pcdhgb8A0A140LI48 Gm10209-201ENSMUST00000203397 1607 ntBASIC16.96■□□□□ 0.3
Pcdhgb8A0A140LI48 Prmt1-202ENSMUST00000107843 1508 ntTSL 1 (best) BASIC16.96■□□□□ 0.3
Pcdhgb8A0A140LI48 Lingo1-203ENSMUST00000114256 2782 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Pcdhgb8A0A140LI48 Scaf11-201ENSMUST00000047835 5766 ntTSL 5 BASIC16.95■□□□□ 0.3
Pcdhgb8A0A140LI48 Obsl1-202ENSMUST00000113567 5679 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Pcdhgb8A0A140LI48 Sort1-203ENSMUST00000135636 6836 ntAPPRIS ALT2 TSL 1 (best) BASIC16.95■□□□□ 0.3
Pcdhgb8A0A140LI48 Gpc6-204ENSMUST00000125435 2423 ntAPPRIS ALT2 TSL 1 (best) BASIC16.95■□□□□ 0.3
Pcdhgb8A0A140LI48 Klhl25-201ENSMUST00000092073 3385 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Pcdhgb8A0A140LI48 Sumo2-205ENSMUST00000121185 911 ntTSL 3 BASIC16.95■□□□□ 0.3
Pcdhgb8A0A140LI48 Ppp1r13b-201ENSMUST00000054815 4389 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Pcdhgb8A0A140LI48 Prdm8-202ENSMUST00000210477 3316 ntAPPRIS P1 TSL 5 BASIC16.95■□□□□ 0.3
Pcdhgb8A0A140LI48 Dedd2-201ENSMUST00000058702 1828 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Pcdhgb8A0A140LI48 Nek9-201ENSMUST00000040992 5386 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Pcdhgb8A0A140LI48 Cryzl1-203ENSMUST00000117644 1727 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
Pcdhgb8A0A140LI48 Grip1-201ENSMUST00000041962 5343 ntAPPRIS ALT2 TSL 1 (best) BASIC16.95■□□□□ 0.3
Pcdhgb8A0A140LI48 Grk2-202ENSMUST00000088737 3376 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Pcdhgb8A0A140LI48 Mfsd4a-202ENSMUST00000112365 1536 ntAPPRIS ALT2 TSL 5 BASIC16.95■□□□□ 0.3
Pcdhgb8A0A140LI48 Gabpb1-203ENSMUST00000103226 1338 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
Pcdhgb8A0A140LI48 Arx-201ENSMUST00000046565 2881 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Pcdhgb8A0A140LI48 Prob1-203ENSMUST00000190196 4888 ntAPPRIS P1 BASIC16.95■□□□□ 0.3
Pcdhgb8A0A140LI48 Rasgrp1-201ENSMUST00000102534 5229 ntAPPRIS P1 TSL 5 BASIC16.94■□□□□ 0.3
Pcdhgb8A0A140LI48 Vmn1r17-201ENSMUST00000227186 2234 ntAPPRIS P2 BASIC16.94■□□□□ 0.3
Pcdhgb8A0A140LI48 Schip1-201ENSMUST00000029346 2201 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
Pcdhgb8A0A140LI48 Zmym3-202ENSMUST00000117637 1593 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
Pcdhgb8A0A140LI48 Pla2g12a-201ENSMUST00000029629 1561 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Pcdhgb8A0A140LI48 Plin1-201ENSMUST00000032762 1916 ntAPPRIS P1 TSL 5 BASIC16.94■□□□□ 0.3
Pcdhgb8A0A140LI48 Lrfn1-201ENSMUST00000055110 1479 ntAPPRIS P3 TSL 5 BASIC16.94■□□□□ 0.3
Pcdhgb8A0A140LI48 Csnk1a1-210ENSMUST00000170862 2259 ntAPPRIS ALT1 TSL 5 BASIC16.94■□□□□ 0.3
Pcdhgb8A0A140LI48 Paip2-204ENSMUST00000115736 857 ntAPPRIS P1 TSL 3 BASIC16.94■□□□□ 0.3
Retrieved 100 of 76,532 protein–RNA pairs in 46.1 ms