Protein–RNA interactions for Protein: A0A0G2JEM0

Trav3n-3, T cell receptor alpha variable 3D-3 (Fragment), mousemouse

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav3n-3A0A0G2JEM0 Edem1-201ENSMUST00000089162 5817 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Trav3n-3A0A0G2JEM0 Tmem145-201ENSMUST00000108409 2298 ntAPPRIS P2 TSL 2 BASIC14.27□□□□□ -0.13
Trav3n-3A0A0G2JEM0 Chst7-201ENSMUST00000044138 2206 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Trav3n-3A0A0G2JEM0 Insm1-201ENSMUST00000089257 3100 ntAPPRIS P1 BASIC14.27□□□□□ -0.13
Trav3n-3A0A0G2JEM0 Gm5898-201ENSMUST00000121016 2071 ntBASIC14.27□□□□□ -0.13
Trav3n-3A0A0G2JEM0 Mag-207ENSMUST00000191081 2007 ntAPPRIS ALT1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Trav3n-3A0A0G2JEM0 Tjp1-202ENSMUST00000102592 7049 ntAPPRIS P3 TSL 1 (best) BASIC14.27□□□□□ -0.13
Trav3n-3A0A0G2JEM0 Hdhd5-201ENSMUST00000075303 1928 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Trav3n-3A0A0G2JEM0 Msi2-201ENSMUST00000092794 1855 ntAPPRIS P2 TSL 1 (best) BASIC14.27□□□□□ -0.13
Trav3n-3A0A0G2JEM0 Tmem214-202ENSMUST00000201203 6110 ntAPPRIS P2 TSL 1 (best) BASIC14.27□□□□□ -0.13
Trav3n-3A0A0G2JEM0 Dmtn-207ENSMUST00000228001 2437 ntBASIC14.26□□□□□ -0.13
Trav3n-3A0A0G2JEM0 Pdcl3-201ENSMUST00000027247 3914 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Trav3n-3A0A0G2JEM0 Agbl5-215ENSMUST00000202060 3121 ntAPPRIS ALT2 TSL 1 (best) BASIC14.26□□□□□ -0.13
Trav3n-3A0A0G2JEM0 Ttyh3-202ENSMUST00000197452 4576 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
Trav3n-3A0A0G2JEM0 Gm45412-201ENSMUST00000210217 2275 ntBASIC14.26□□□□□ -0.13
Trav3n-3A0A0G2JEM0 Rbm33-204ENSMUST00000114884 6256 ntAPPRIS ALT2 TSL 5 BASIC14.26□□□□□ -0.13
Trav3n-3A0A0G2JEM0 March2-203ENSMUST00000172767 1381 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Trav3n-3A0A0G2JEM0 Fam120c-201ENSMUST00000073364 5463 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Trav3n-3A0A0G2JEM0 Bmt2-202ENSMUST00000203078 4462 ntAPPRIS ALT2 TSL 1 (best) BASIC14.26□□□□□ -0.13
Trav3n-3A0A0G2JEM0 Gm13238-201ENSMUST00000117655 780 ntBASIC14.26□□□□□ -0.13
Trav3n-3A0A0G2JEM0 Ttc36-201ENSMUST00000044694 888 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Trav3n-3A0A0G2JEM0 Oaz1-201ENSMUST00000060987 1071 ntAPPRIS ALT1 TSL 5 BASIC14.26□□□□□ -0.13
Trav3n-3A0A0G2JEM0 Bloc1s2-201ENSMUST00000079033 878 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Trav3n-3A0A0G2JEM0 Atp8b2-201ENSMUST00000069805 5559 ntAPPRIS ALT2 TSL 5 BASIC14.26□□□□□ -0.13
Trav3n-3A0A0G2JEM0 Ecel1-204ENSMUST00000161002 3033 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Trav3n-3A0A0G2JEM0 Dlgap1-206ENSMUST00000133717 2355 ntAPPRIS ALT2 TSL 5 BASIC14.26□□□□□ -0.13
Trav3n-3A0A0G2JEM0 Rbm38-201ENSMUST00000029014 1768 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Trav3n-3A0A0G2JEM0 Rcc1-202ENSMUST00000084250 2285 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Trav3n-3A0A0G2JEM0 Adam33-201ENSMUST00000052104 2795 ntAPPRIS ALT2 TSL 1 (best) BASIC14.26□□□□□ -0.13
Trav3n-3A0A0G2JEM0 Eml1-203ENSMUST00000109860 4160 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Trav3n-3A0A0G2JEM0 Csnk2a2-203ENSMUST00000212214 6779 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Trav3n-3A0A0G2JEM0 Ahcyl2-202ENSMUST00000102995 5155 ntAPPRIS ALT1 TSL 5 BASIC14.26□□□□□ -0.13
Trav3n-3A0A0G2JEM0 Ppm1a-201ENSMUST00000021514 7668 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Trav3n-3A0A0G2JEM0 Acss2-201ENSMUST00000029135 2931 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Trav3n-3A0A0G2JEM0 Glrx2-210ENSMUST00000185362 3337 ntAPPRIS P4 TSL 1 (best) BASIC14.25□□□□□ -0.13
Trav3n-3A0A0G2JEM0 Foxf2-201ENSMUST00000042054 2363 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Trav3n-3A0A0G2JEM0 C2cd4c-202ENSMUST00000178228 2761 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Trav3n-3A0A0G2JEM0 Rasl10b-204ENSMUST00000175848 3249 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
Trav3n-3A0A0G2JEM0 Xkr4-201ENSMUST00000070533 3634 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Trav3n-3A0A0G2JEM0 Chml-203ENSMUST00000210367 1324 ntTSL 5 BASIC14.25□□□□□ -0.13
Trav3n-3A0A0G2JEM0 Vac14-201ENSMUST00000034190 3069 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Trav3n-3A0A0G2JEM0 Zfp346-202ENSMUST00000159147 1146 ntTSL 5 BASIC14.25□□□□□ -0.13
Trav3n-3A0A0G2JEM0 Cdca7l-201ENSMUST00000021592 2957 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Trav3n-3A0A0G2JEM0 Mpv17l2-201ENSMUST00000038626 980 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Trav3n-3A0A0G2JEM0 Itsn1-201ENSMUST00000056482 5364 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
Trav3n-3A0A0G2JEM0 Nrros-203ENSMUST00000115165 2389 ntAPPRIS ALT2 TSL 1 (best) BASIC14.25□□□□□ -0.13
Trav3n-3A0A0G2JEM0 Stxbp5-209ENSMUST00000141722 4702 ntAPPRIS P2 TSL 5 BASIC14.25□□□□□ -0.13
Trav3n-3A0A0G2JEM0 Khk-204ENSMUST00000201621 1583 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Trav3n-3A0A0G2JEM0 Tspan5-201ENSMUST00000029800 6653 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Trav3n-3A0A0G2JEM0 Atp6v0a2-201ENSMUST00000037865 5345 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Trav3n-3A0A0G2JEM0 Adssl1-202ENSMUST00000180015 1819 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
Trav3n-3A0A0G2JEM0 Timm8a1-201ENSMUST00000054213 1421 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Trav3n-3A0A0G2JEM0 Adpgk-205ENSMUST00000217570 2484 ntAPPRIS P2 TSL 1 (best) BASIC14.24□□□□□ -0.13
Trav3n-3A0A0G2JEM0 Zbtb9-201ENSMUST00000120016 2798 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Trav3n-3A0A0G2JEM0 Tmem238-201ENSMUST00000168578 1375 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Trav3n-3A0A0G2JEM0 Rin3-202ENSMUST00000101114 2394 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
Trav3n-3A0A0G2JEM0 Rab28-203ENSMUST00000201422 1697 ntTSL 5 BASIC14.24□□□□□ -0.13
Trav3n-3A0A0G2JEM0 Map1lc3b-204ENSMUST00000181826 2633 ntBASIC14.24□□□□□ -0.13
Trav3n-3A0A0G2JEM0 Ube2e3-202ENSMUST00000121433 1235 ntAPPRIS P1 TSL 5 BASIC14.24□□□□□ -0.13
Trav3n-3A0A0G2JEM0 Eif5a-213ENSMUST00000164359 1281 ntAPPRIS P1 TSL 5 BASIC14.24□□□□□ -0.13
Trav3n-3A0A0G2JEM0 Gm40881-201ENSMUST00000223397 166 ntBASIC14.24□□□□□ -0.13
Trav3n-3A0A0G2JEM0 Sdc3-201ENSMUST00000070478 4973 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Trav3n-3A0A0G2JEM0 Dedd2-201ENSMUST00000058702 1828 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Trav3n-3A0A0G2JEM0 Ooep-201ENSMUST00000034900 2138 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Trav3n-3A0A0G2JEM0 Ifrd2-201ENSMUST00000010192 2056 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Trav3n-3A0A0G2JEM0 Sik3-204ENSMUST00000126865 6287 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Trav3n-3A0A0G2JEM0 Chpt1-201ENSMUST00000020253 3898 ntAPPRIS P3 TSL 1 (best) BASIC14.23□□□□□ -0.13
Trav3n-3A0A0G2JEM0 Ttc13-201ENSMUST00000041614 3038 ntTSL 2 BASIC14.23□□□□□ -0.13
Trav3n-3A0A0G2JEM0 Zrsr2-202ENSMUST00000112289 2735 ntAPPRIS P1 TSL 2 BASIC14.23□□□□□ -0.13
Trav3n-3A0A0G2JEM0 Slc25a47-202ENSMUST00000221080 1890 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
Trav3n-3A0A0G2JEM0 Zmym3-202ENSMUST00000117637 1593 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
Trav3n-3A0A0G2JEM0 Tpst2-201ENSMUST00000031287 1835 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Trav3n-3A0A0G2JEM0 Mir6236-201ENSMUST00000184437 123 ntBASIC14.23□□□□□ -0.13
Trav3n-3A0A0G2JEM0 Foxj3-206ENSMUST00000138845 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC14.23□□□□□ -0.13
Trav3n-3A0A0G2JEM0 Vegfa-207ENSMUST00000142351 1973 ntAPPRIS ALT2 TSL 1 (best) BASIC14.23□□□□□ -0.13
Trav3n-3A0A0G2JEM0 Clta-202ENSMUST00000107846 1710 ntAPPRIS ALT2 TSL 1 (best) BASIC14.23□□□□□ -0.13
Trav3n-3A0A0G2JEM0 Rap2a-201ENSMUST00000062117 4191 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Trav3n-3A0A0G2JEM0 Ncoa5-201ENSMUST00000040381 3179 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Trav3n-3A0A0G2JEM0 Shisa5-202ENSMUST00000112059 1910 ntAPPRIS ALT2 TSL 1 (best) BASIC14.23□□□□□ -0.13
Trav3n-3A0A0G2JEM0 Msx1-201ENSMUST00000063116 1935 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Trav3n-3A0A0G2JEM0 Gm10461-201ENSMUST00000202073 4786 ntBASIC14.23□□□□□ -0.13
Trav3n-3A0A0G2JEM0 Eps8-203ENSMUST00000111878 3560 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Trav3n-3A0A0G2JEM0 Cdc14b-203ENSMUST00000109770 3052 ntAPPRIS P3 TSL 1 (best) BASIC14.23□□□□□ -0.13
Trav3n-3A0A0G2JEM0 Kdm5b-203ENSMUST00000112198 5413 ntAPPRIS ALT2 TSL 1 (best) BASIC14.23□□□□□ -0.13
Trav3n-3A0A0G2JEM0 Mterf1a-202ENSMUST00000117463 2413 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Trav3n-3A0A0G2JEM0 Mtcl1-201ENSMUST00000086693 7221 ntAPPRIS P3 TSL 1 (best) BASIC14.22□□□□□ -0.13
Trav3n-3A0A0G2JEM0 Smim10l1-201ENSMUST00000100864 2842 ntAPPRIS P1 BASIC14.22□□□□□ -0.13
Trav3n-3A0A0G2JEM0 Zbtb24-201ENSMUST00000080771 2844 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Trav3n-3A0A0G2JEM0 Pdzd8-201ENSMUST00000099274 7076 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Trav3n-3A0A0G2JEM0 Kbtbd13-201ENSMUST00000068307 2969 ntAPPRIS P1 BASIC14.22□□□□□ -0.13
Trav3n-3A0A0G2JEM0 Cacnb1-202ENSMUST00000092736 1880 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
Trav3n-3A0A0G2JEM0 Klhl32-201ENSMUST00000084781 2287 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
Trav3n-3A0A0G2JEM0 Msx2-201ENSMUST00000021922 2453 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Trav3n-3A0A0G2JEM0 Spock1-204ENSMUST00000186271 2005 ntAPPRIS P3 TSL 1 (best) BASIC14.22□□□□□ -0.13
Trav3n-3A0A0G2JEM0 Sec61a2-202ENSMUST00000102981 2448 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Trav3n-3A0A0G2JEM0 Gm6598-201ENSMUST00000202719 2615 ntBASIC14.22□□□□□ -0.13
Trav3n-3A0A0G2JEM0 Ipo9-201ENSMUST00000041023 6247 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Trav3n-3A0A0G2JEM0 Ube2d3-202ENSMUST00000166033 2504 ntAPPRIS P2 TSL 1 (best) BASIC14.21□□□□□ -0.13
Trav3n-3A0A0G2JEM0 Maff-201ENSMUST00000096350 1933 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Trav3n-3A0A0G2JEM0 Nploc4-202ENSMUST00000103017 4025 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
Retrieved 100 of 76,532 protein–RNA pairs in 24.3 ms