Protein–RNA interactions for Protein: A0A0B4J1K2

Trav9-4, T cell receptor alpha variable 9-4 (Fragment), mousemouse

Predictions only

Length 113 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav9-4A0A0B4J1K2 Qpct-201ENSMUST00000040789 1924 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Trav9-4A0A0B4J1K2 Gnai2-203ENSMUST00000192837 421 ntTSL 5 BASIC14.18□□□□□ -0.14
Trav9-4A0A0B4J1K2 Grifin-201ENSMUST00000042993 613 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Trav9-4A0A0B4J1K2 Gm10306-201ENSMUST00000094969 533 ntAPPRIS P1 BASIC14.18□□□□□ -0.14
Trav9-4A0A0B4J1K2 Polg2-201ENSMUST00000021060 1506 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Trav9-4A0A0B4J1K2 Ak2-202ENSMUST00000102604 1781 ntAPPRIS ALT1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Trav9-4A0A0B4J1K2 Fmnl2-203ENSMUST00000090952 5414 ntAPPRIS P1 TSL 5 BASIC14.18□□□□□ -0.14
Trav9-4A0A0B4J1K2 Dnaja4-201ENSMUST00000070070 3003 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Trav9-4A0A0B4J1K2 Slc11a1-211ENSMUST00000187516 1893 ntAPPRIS ALT2 TSL 5 BASIC14.18□□□□□ -0.14
Trav9-4A0A0B4J1K2 C230096K16Rik-201ENSMUST00000198074 1722 ntBASIC14.18□□□□□ -0.14
Trav9-4A0A0B4J1K2 Map4k4-201ENSMUST00000163854 5782 ntAPPRIS ALT2 TSL 5 BASIC14.18□□□□□ -0.14
Trav9-4A0A0B4J1K2 Atp11a-202ENSMUST00000091237 7443 ntAPPRIS P3 TSL 1 (best) BASIC14.18□□□□□ -0.14
Trav9-4A0A0B4J1K2 Tmem55b-205ENSMUST00000160835 2755 ntAPPRIS P3 TSL 1 (best) BASIC14.17□□□□□ -0.14
Trav9-4A0A0B4J1K2 Fam78b-205ENSMUST00000165874 4986 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Trav9-4A0A0B4J1K2 St7l-201ENSMUST00000059271 5728 ntAPPRIS P3 TSL 1 (best) BASIC14.17□□□□□ -0.14
Trav9-4A0A0B4J1K2 Cdh4-203ENSMUST00000108911 1208 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
Trav9-4A0A0B4J1K2 Cdk19os-202ENSMUST00000143103 1124 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
Trav9-4A0A0B4J1K2 Kctd17-206ENSMUST00000162517 901 ntAPPRIS P4 TSL 1 (best) BASIC14.17□□□□□ -0.14
Trav9-4A0A0B4J1K2 Kctd17-209ENSMUST00000166142 826 ntAPPRIS ALT2 TSL 1 (best) BASIC14.17□□□□□ -0.14
Trav9-4A0A0B4J1K2 Gon7-202ENSMUST00000179263 525 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
Trav9-4A0A0B4J1K2 Lhx1-204ENSMUST00000184646 1201 ntTSL 5 BASIC14.17□□□□□ -0.14
Trav9-4A0A0B4J1K2 1700012B09Rik-204ENSMUST00000191047 654 ntAPPRIS ALT2 TSL 3 BASIC14.17□□□□□ -0.14
Trav9-4A0A0B4J1K2 Hist1h2ag-201ENSMUST00000091741 485 ntAPPRIS P1 BASIC14.17□□□□□ -0.14
Trav9-4A0A0B4J1K2 Mgat4b-201ENSMUST00000041725 2429 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Trav9-4A0A0B4J1K2 Iqck-206ENSMUST00000208658 2891 ntBASIC14.17□□□□□ -0.14
Trav9-4A0A0B4J1K2 Ciapin1-201ENSMUST00000034233 1807 ntAPPRIS P1 TSL 5 BASIC14.17□□□□□ -0.14
Trav9-4A0A0B4J1K2 Ubr5-201ENSMUST00000110336 9242 ntTSL 5 BASIC14.17□□□□□ -0.14
Trav9-4A0A0B4J1K2 Hrh3-201ENSMUST00000056480 2706 ntAPPRIS P2 TSL 1 (best) BASIC14.17□□□□□ -0.14
Trav9-4A0A0B4J1K2 Rgs19-202ENSMUST00000108769 1460 ntTSL 2 BASIC14.17□□□□□ -0.14
Trav9-4A0A0B4J1K2 Notch4-201ENSMUST00000015612 6591 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Trav9-4A0A0B4J1K2 Foxp1-220ENSMUST00000176565 3727 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
Trav9-4A0A0B4J1K2 Rragd-203ENSMUST00000098190 5008 ntAPPRIS P1 TSL 2 BASIC14.17□□□□□ -0.14
Trav9-4A0A0B4J1K2 Klhl25-203ENSMUST00000205612 1343 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
Trav9-4A0A0B4J1K2 Hsd17b2-201ENSMUST00000034304 1320 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Trav9-4A0A0B4J1K2 Dusp14-202ENSMUST00000100705 1447 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Trav9-4A0A0B4J1K2 Ezh2-204ENSMUST00000114618 2775 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
Trav9-4A0A0B4J1K2 Satb1-211ENSMUST00000152830 5993 ntAPPRIS P2 TSL 2 BASIC14.16□□□□□ -0.14
Trav9-4A0A0B4J1K2 Pkp4-210ENSMUST00000168631 4484 ntAPPRIS ALT1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Trav9-4A0A0B4J1K2 E130218I03Rik-201ENSMUST00000122952 943 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Trav9-4A0A0B4J1K2 Neurl1b-203ENSMUST00000183077 1084 ntTSL 5 BASIC14.16□□□□□ -0.14
Trav9-4A0A0B4J1K2 Msantd1-203ENSMUST00000202205 744 ntTSL 2 BASIC14.16□□□□□ -0.14
Trav9-4A0A0B4J1K2 Emc9-201ENSMUST00000022828 855 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Trav9-4A0A0B4J1K2 Cpne2-201ENSMUST00000048653 2342 ntAPPRIS P2 TSL 1 (best) BASIC14.16□□□□□ -0.14
Trav9-4A0A0B4J1K2 Nus1-201ENSMUST00000023830 4605 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Trav9-4A0A0B4J1K2 D16Ertd472e-202ENSMUST00000114219 1576 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Trav9-4A0A0B4J1K2 Gnpda1-201ENSMUST00000063814 2289 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Trav9-4A0A0B4J1K2 Plppr3-201ENSMUST00000092325 2766 ntAPPRIS P3 TSL 1 (best) BASIC14.16□□□□□ -0.14
Trav9-4A0A0B4J1K2 Fbxw2-206ENSMUST00000113080 1923 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Trav9-4A0A0B4J1K2 Htra3-201ENSMUST00000087629 2750 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Trav9-4A0A0B4J1K2 H19-202ENSMUST00000136359 2286 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
Trav9-4A0A0B4J1K2 Tex30-212ENSMUST00000152239 1046 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Trav9-4A0A0B4J1K2 B930094E09Rik-201ENSMUST00000164667 1240 ntAPPRIS P1 BASIC14.15□□□□□ -0.14
Trav9-4A0A0B4J1K2 Rab6b-202ENSMUST00000189134 716 ntTSL 3 BASIC14.15□□□□□ -0.14
Trav9-4A0A0B4J1K2 Gpr3-201ENSMUST00000052090 1116 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Trav9-4A0A0B4J1K2 E130116L18Rik-201ENSMUST00000066954 306 ntAPPRIS P1 BASIC14.15□□□□□ -0.14
Trav9-4A0A0B4J1K2 Gramd1a-201ENSMUST00000001280 2713 ntAPPRIS P2 TSL 1 (best) BASIC14.15□□□□□ -0.14
Trav9-4A0A0B4J1K2 Map4k5-203ENSMUST00000110570 4498 ntAPPRIS P5 TSL 5 BASIC14.15□□□□□ -0.14
Trav9-4A0A0B4J1K2 Zbtb7c-202ENSMUST00000167921 2147 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Trav9-4A0A0B4J1K2 Asap2-202ENSMUST00000064595 5678 ntAPPRIS P4 TSL 5 BASIC14.15□□□□□ -0.14
Trav9-4A0A0B4J1K2 Ago4-201ENSMUST00000084289 6537 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Trav9-4A0A0B4J1K2 Ldb1-201ENSMUST00000026252 1718 ntAPPRIS P2 TSL 1 (best) BASIC14.15□□□□□ -0.14
Trav9-4A0A0B4J1K2 Epdr1-201ENSMUST00000002885 2363 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Trav9-4A0A0B4J1K2 Olfr94-201ENSMUST00000055324 1304 ntAPPRIS P2 BASIC14.15□□□□□ -0.15
Trav9-4A0A0B4J1K2 Rchy1-201ENSMUST00000031345 1967 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Trav9-4A0A0B4J1K2 Ehmt2-201ENSMUST00000013931 4026 ntAPPRIS P4 TSL 1 (best) BASIC14.14□□□□□ -0.15
Trav9-4A0A0B4J1K2 Hmgxb3-201ENSMUST00000091884 5101 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Trav9-4A0A0B4J1K2 Capzb-204ENSMUST00000102508 1674 ntAPPRIS ALT1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Trav9-4A0A0B4J1K2 Sfr1-201ENSMUST00000099353 1583 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Trav9-4A0A0B4J1K2 Spry1-202ENSMUST00000108107 2773 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Trav9-4A0A0B4J1K2 Ube2d-ps-204ENSMUST00000137510 1846 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
Trav9-4A0A0B4J1K2 Krt24-201ENSMUST00000017255 1847 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Trav9-4A0A0B4J1K2 Gm13067-201ENSMUST00000134236 404 ntTSL 5 BASIC14.14□□□□□ -0.15
Trav9-4A0A0B4J1K2 P4hb-203ENSMUST00000168360 770 ntTSL 3 BASIC14.14□□□□□ -0.15
Trav9-4A0A0B4J1K2 Gm18284-201ENSMUST00000172604 624 ntBASIC14.14□□□□□ -0.15
Trav9-4A0A0B4J1K2 Gpatch2-201ENSMUST00000044812 1639 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
Trav9-4A0A0B4J1K2 Gas2l1-203ENSMUST00000109895 2530 ntAPPRIS P3 TSL 1 (best) BASIC14.14□□□□□ -0.15
Trav9-4A0A0B4J1K2 Twist2-202ENSMUST00000186075 2525 ntAPPRIS P1 BASIC14.14□□□□□ -0.15
Trav9-4A0A0B4J1K2 Nrxn2-204ENSMUST00000113461 5505 ntAPPRIS ALT2 TSL 5 BASIC14.14□□□□□ -0.15
Trav9-4A0A0B4J1K2 Eif2b4-212ENSMUST00000202758 1767 ntTSL 5 BASIC14.14□□□□□ -0.15
Trav9-4A0A0B4J1K2 Nags-201ENSMUST00000055409 2028 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Trav9-4A0A0B4J1K2 Ankrd40-203ENSMUST00000107818 3487 ntAPPRIS P3 TSL 5 BASIC14.13□□□□□ -0.15
Trav9-4A0A0B4J1K2 Tmem260-209ENSMUST00000226422 6333 ntAPPRIS ALT2 BASIC14.13□□□□□ -0.15
Trav9-4A0A0B4J1K2 Jmjd7-201ENSMUST00000044675 1373 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Trav9-4A0A0B4J1K2 Gm13234-201ENSMUST00000120010 747 ntBASIC14.13□□□□□ -0.15
Trav9-4A0A0B4J1K2 4930444P10Rik-203ENSMUST00000151004 1001 ntAPPRIS P2 TSL 3 BASIC14.13□□□□□ -0.15
Trav9-4A0A0B4J1K2 Sirpa-209ENSMUST00000160276 876 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
Trav9-4A0A0B4J1K2 Hoxc12-201ENSMUST00000055562 1031 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Trav9-4A0A0B4J1K2 Dennd6a-201ENSMUST00000037585 6638 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Trav9-4A0A0B4J1K2 Dhx15-205ENSMUST00000199321 2550 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
Trav9-4A0A0B4J1K2 Meis3-205ENSMUST00000176506 1839 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
Trav9-4A0A0B4J1K2 Gmpr-201ENSMUST00000000260 1580 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Trav9-4A0A0B4J1K2 Gm29394-202ENSMUST00000176935 1326 ntAPPRIS P5 TSL 2 BASIC14.13□□□□□ -0.15
Trav9-4A0A0B4J1K2 Mtmr1-202ENSMUST00000114601 4640 ntAPPRIS ALT2 TSL 5 BASIC14.13□□□□□ -0.15
Trav9-4A0A0B4J1K2 Eif2b4-202ENSMUST00000114603 1966 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
Trav9-4A0A0B4J1K2 Atrnl1-201ENSMUST00000077282 6581 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Trav9-4A0A0B4J1K2 Smim10l2a-201ENSMUST00000068106 2393 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Trav9-4A0A0B4J1K2 Lefty1-201ENSMUST00000037361 1620 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Trav9-4A0A0B4J1K2 4732440D04Rik-203ENSMUST00000191825 5428 ntBASIC14.12□□□□□ -0.15
Trav9-4A0A0B4J1K2 Bmp2k-202ENSMUST00000112974 3244 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
Trav9-4A0A0B4J1K2 Smarcc1-207ENSMUST00000199896 5773 ntAPPRIS ALT2 TSL 1 (best) BASIC14.12□□□□□ -0.15
Retrieved 100 of 76,532 protein–RNA pairs in 18.8 ms