Protein–RNA interactions for Protein: A0A0B4J1H3

Trbv16, T cell receptor beta, variable 16 (Fragment), mousemouse

Predictions only

Length 115 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trbv16A0A0B4J1H3 Zdhhc13-201ENSMUST00000118927 2410 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Trbv16A0A0B4J1H3 Matk-205ENSMUST00000121205 1841 ntAPPRIS ALT2 TSL 1 (best) BASIC13.67□□□□□ -0.22
Trbv16A0A0B4J1H3 Fzr1-205ENSMUST00000140901 3057 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Trbv16A0A0B4J1H3 Abr-202ENSMUST00000072740 5394 ntAPPRIS P1 TSL 5 BASIC13.67□□□□□ -0.22
Trbv16A0A0B4J1H3 Gm14117-201ENSMUST00000122417 843 ntBASIC13.67□□□□□ -0.22
Trbv16A0A0B4J1H3 Zfp335os-201ENSMUST00000129364 1127 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
Trbv16A0A0B4J1H3 Gm15202-201ENSMUST00000154188 393 ntTSL 3 BASIC13.67□□□□□ -0.22
Trbv16A0A0B4J1H3 Ubxn1-202ENSMUST00000166407 1032 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Trbv16A0A0B4J1H3 Snx16-203ENSMUST00000195822 1084 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
Trbv16A0A0B4J1H3 Ntsr2-202ENSMUST00000220892 846 ntTSL 3 BASIC13.67□□□□□ -0.22
Trbv16A0A0B4J1H3 Ptms-201ENSMUST00000032216 1149 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Trbv16A0A0B4J1H3 Gm5576-201ENSMUST00000075809 1236 ntBASIC13.67□□□□□ -0.22
Trbv16A0A0B4J1H3 Spsb4-201ENSMUST00000055433 2720 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Trbv16A0A0B4J1H3 1700003E16Rik-202ENSMUST00000203203 2070 ntTSL 2 BASIC13.67□□□□□ -0.22
Trbv16A0A0B4J1H3 BC034090-204ENSMUST00000186156 4873 ntAPPRIS P5 TSL 5 BASIC13.67□□□□□ -0.22
Trbv16A0A0B4J1H3 Hpca-204ENSMUST00000116444 1847 ntAPPRIS P1 TSL 5 BASIC13.67□□□□□ -0.22
Trbv16A0A0B4J1H3 Hes3-201ENSMUST00000094438 1829 ntAPPRIS P2 TSL 1 (best) BASIC13.67□□□□□ -0.22
Trbv16A0A0B4J1H3 Mtmr14-201ENSMUST00000113146 2676 ntAPPRIS P2 TSL 1 (best) BASIC13.67□□□□□ -0.22
Trbv16A0A0B4J1H3 Gm28523-201ENSMUST00000190040 1588 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
Trbv16A0A0B4J1H3 Kansl1l-201ENSMUST00000068168 4459 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Trbv16A0A0B4J1H3 Alg1-201ENSMUST00000049207 1669 ntAPPRIS ALT2 TSL 2 BASIC13.66□□□□□ -0.22
Trbv16A0A0B4J1H3 Nat14-204ENSMUST00000207687 1415 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Trbv16A0A0B4J1H3 Ncoa7-206ENSMUST00000215725 1445 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
Trbv16A0A0B4J1H3 Rad1-201ENSMUST00000022856 1514 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Trbv16A0A0B4J1H3 Fbxo24-202ENSMUST00000111002 2306 ntTSL 5 BASIC13.66□□□□□ -0.22
Trbv16A0A0B4J1H3 1700023F06Rik-202ENSMUST00000107026 1127 ntAPPRIS ALT2 TSL 1 (best) BASIC13.66□□□□□ -0.22
Trbv16A0A0B4J1H3 Gm3448-203ENSMUST00000179539 787 ntAPPRIS ALT2 TSL 1 (best) BASIC13.66□□□□□ -0.22
Trbv16A0A0B4J1H3 D630002J18Rik-201ENSMUST00000181854 1115 ntBASIC13.66□□□□□ -0.22
Trbv16A0A0B4J1H3 Gm3448-201ENSMUST00000097399 787 ntAPPRIS P5 TSL 1 (best) BASIC13.66□□□□□ -0.22
Trbv16A0A0B4J1H3 Rimklb-201ENSMUST00000068242 4725 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Trbv16A0A0B4J1H3 Itga9-201ENSMUST00000044165 7020 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Trbv16A0A0B4J1H3 Fgf11-201ENSMUST00000011285 2534 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
Trbv16A0A0B4J1H3 Usp36-202ENSMUST00000106296 5655 ntAPPRIS P1 TSL 5 BASIC13.66□□□□□ -0.22
Trbv16A0A0B4J1H3 Stim2-204ENSMUST00000201469 4892 ntAPPRIS ALT2 TSL 5 BASIC13.66□□□□□ -0.22
Trbv16A0A0B4J1H3 Znrf1-205ENSMUST00000172856 4600 ntAPPRIS P1 TSL 5 BASIC13.66□□□□□ -0.22
Trbv16A0A0B4J1H3 Ago4-201ENSMUST00000084289 6537 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Trbv16A0A0B4J1H3 Gp5-201ENSMUST00000061190 2196 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Trbv16A0A0B4J1H3 Swsap1-201ENSMUST00000053583 1838 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Trbv16A0A0B4J1H3 Rxra-201ENSMUST00000077257 4905 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Trbv16A0A0B4J1H3 Fam53a-202ENSMUST00000065119 2009 ntAPPRIS P2 TSL 1 (best) BASIC13.65□□□□□ -0.22
Trbv16A0A0B4J1H3 Kmt5b-204ENSMUST00000113970 2975 ntAPPRIS ALT2 TSL 1 (best) BASIC13.65□□□□□ -0.22
Trbv16A0A0B4J1H3 Wdr41-208ENSMUST00000222995 1112 ntTSL 5 BASIC13.65□□□□□ -0.22
Trbv16A0A0B4J1H3 Gm9922-201ENSMUST00000066461 435 ntAPPRIS P1 BASIC13.65□□□□□ -0.22
Trbv16A0A0B4J1H3 Cyp4f16-201ENSMUST00000003416 2227 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Trbv16A0A0B4J1H3 Mdfi-201ENSMUST00000035375 1371 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Trbv16A0A0B4J1H3 Actl6b-205ENSMUST00000139395 1592 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Trbv16A0A0B4J1H3 Tial1-201ENSMUST00000033135 1580 ntAPPRIS ALT1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Trbv16A0A0B4J1H3 Smyd2-201ENSMUST00000027897 1680 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Trbv16A0A0B4J1H3 Dennd6a-201ENSMUST00000037585 6638 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Trbv16A0A0B4J1H3 Zfp644-205ENSMUST00000112698 5689 ntAPPRIS P2 TSL 5 BASIC13.65□□□□□ -0.22
Trbv16A0A0B4J1H3 Cldn23-201ENSMUST00000060128 1848 ntAPPRIS P1 BASIC13.64□□□□□ -0.23
Trbv16A0A0B4J1H3 Ptges3-201ENSMUST00000052798 2000 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Trbv16A0A0B4J1H3 Olig2-201ENSMUST00000035608 2437 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Trbv16A0A0B4J1H3 Hbs1l-202ENSMUST00000061324 1998 ntTSL 3 BASIC13.64□□□□□ -0.23
Trbv16A0A0B4J1H3 Deptor-203ENSMUST00000100660 1377 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
Trbv16A0A0B4J1H3 Bex1-202ENSMUST00000113118 754 ntAPPRIS P1 TSL 2 BASIC13.64□□□□□ -0.23
Trbv16A0A0B4J1H3 Gm4553-202ENSMUST00000210925 1044 ntAPPRIS P5 BASIC13.64□□□□□ -0.23
Trbv16A0A0B4J1H3 AC158592.1-201ENSMUST00000215560 1113 ntTSL 5 BASIC13.64□□□□□ -0.23
Trbv16A0A0B4J1H3 Spcs1-204ENSMUST00000226782 949 ntBASIC13.64□□□□□ -0.23
Trbv16A0A0B4J1H3 Src-203ENSMUST00000109529 2020 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
Trbv16A0A0B4J1H3 Gm15853-202ENSMUST00000195518 2041 ntBASIC13.64□□□□□ -0.23
Trbv16A0A0B4J1H3 Mon2-202ENSMUST00000073792 9301 ntAPPRIS ALT2 TSL 5 BASIC13.64□□□□□ -0.23
Trbv16A0A0B4J1H3 Cables2-201ENSMUST00000108891 2975 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Trbv16A0A0B4J1H3 Vapa-201ENSMUST00000024897 1640 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Trbv16A0A0B4J1H3 Espn-203ENSMUST00000070018 1618 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
Trbv16A0A0B4J1H3 Tmem127-201ENSMUST00000035871 4811 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Trbv16A0A0B4J1H3 Gas2l1-203ENSMUST00000109895 2530 ntAPPRIS P3 TSL 1 (best) BASIC13.63□□□□□ -0.23
Trbv16A0A0B4J1H3 Ndfip2-206ENSMUST00000181969 2532 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Trbv16A0A0B4J1H3 Bcl11b-203ENSMUST00000109891 2888 ntAPPRIS ALT2 TSL 1 (best) BASIC13.63□□□□□ -0.23
Trbv16A0A0B4J1H3 1700086O06Rik-202ENSMUST00000181871 1564 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
Trbv16A0A0B4J1H3 Tagln-201ENSMUST00000034590 1595 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Trbv16A0A0B4J1H3 Cnn3-201ENSMUST00000029773 2049 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Trbv16A0A0B4J1H3 Tmem39b-201ENSMUST00000102588 1810 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Trbv16A0A0B4J1H3 Golga7b-202ENSMUST00000122375 2836 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Trbv16A0A0B4J1H3 Bsg-205ENSMUST00000179781 1261 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
Trbv16A0A0B4J1H3 Gm7160-202ENSMUST00000188519 1027 ntBASIC13.63□□□□□ -0.23
Trbv16A0A0B4J1H3 Aldoa-ps3-201ENSMUST00000217558 306 ntBASIC13.63□□□□□ -0.23
Trbv16A0A0B4J1H3 Atf5-202ENSMUST00000107893 1735 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Trbv16A0A0B4J1H3 Dxo-201ENSMUST00000046244 1519 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Trbv16A0A0B4J1H3 Slc16a10-202ENSMUST00000213488 2325 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
Trbv16A0A0B4J1H3 Fam46a-202ENSMUST00000187711 5648 ntAPPRIS ALT2 TSL 1 (best) BASIC13.63□□□□□ -0.23
Trbv16A0A0B4J1H3 Metap1-201ENSMUST00000029804 2686 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Trbv16A0A0B4J1H3 Kdelr3-201ENSMUST00000010974 1414 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Trbv16A0A0B4J1H3 Adgrl1-207ENSMUST00000141158 8181 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
Trbv16A0A0B4J1H3 Eid2b-201ENSMUST00000094651 1751 ntAPPRIS P1 BASIC13.63□□□□□ -0.23
Trbv16A0A0B4J1H3 Kcns3-201ENSMUST00000055673 2933 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Trbv16A0A0B4J1H3 Lhfp-201ENSMUST00000059562 2108 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Trbv16A0A0B4J1H3 Cdk19-201ENSMUST00000044672 5807 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Trbv16A0A0B4J1H3 Cblc-201ENSMUST00000043822 1662 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Trbv16A0A0B4J1H3 Tlcd1-201ENSMUST00000092880 2700 ntAPPRIS ALT2 TSL 1 (best) BASIC13.63□□□□□ -0.23
Trbv16A0A0B4J1H3 Map6-206ENSMUST00000208605 2275 ntAPPRIS ALT2 TSL 1 (best) BASIC13.62□□□□□ -0.23
Trbv16A0A0B4J1H3 Fzd5-202ENSMUST00000116133 2895 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Trbv16A0A0B4J1H3 B4galt4-205ENSMUST00000114712 2168 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Trbv16A0A0B4J1H3 Nfix-204ENSMUST00000109764 5476 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
Trbv16A0A0B4J1H3 Rdh14-201ENSMUST00000020947 1480 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Trbv16A0A0B4J1H3 Tfeb-203ENSMUST00000113284 1974 ntTSL 5 BASIC13.62□□□□□ -0.23
Trbv16A0A0B4J1H3 Fbxo17-201ENSMUST00000032818 1958 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Trbv16A0A0B4J1H3 Atp8b2-202ENSMUST00000107396 5705 ntAPPRIS ALT2 TSL 5 BASIC13.62□□□□□ -0.23
Trbv16A0A0B4J1H3 Lrch3-208ENSMUST00000165616 1875 ntTSL 5 BASIC13.62□□□□□ -0.23
Trbv16A0A0B4J1H3 Usf2-211ENSMUST00000172417 648 ntTSL 5 BASIC13.62□□□□□ -0.23
Retrieved 100 of 76,532 protein–RNA pairs in 18 ms