Protein–RNA interactions for Protein: A0A0B4J1G8

Trbv2, T cell receptor beta, variable 2 (Fragment), mousemouse

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trbv2A0A0B4J1G8 Tgif1-209ENSMUST00000166395 1714 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
Trbv2A0A0B4J1G8 4930439D14Rik-201ENSMUST00000186765 359 ntBASIC16.77■□□□□ 0.28
Trbv2A0A0B4J1G8 A030005L19Rik-201ENSMUST00000220768 806 ntAPPRIS P1 BASIC16.77■□□□□ 0.28
Trbv2A0A0B4J1G8 Tmtc1-201ENSMUST00000060095 8383 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
Trbv2A0A0B4J1G8 Srcin1-201ENSMUST00000107590 5493 ntAPPRIS ALT2 TSL 5 BASIC16.77■□□□□ 0.27
Trbv2A0A0B4J1G8 Cnn3-201ENSMUST00000029773 2049 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
Trbv2A0A0B4J1G8 Plk3-201ENSMUST00000076859 2378 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
Trbv2A0A0B4J1G8 Gm42900-201ENSMUST00000197184 2167 ntBASIC16.77■□□□□ 0.27
Trbv2A0A0B4J1G8 Lrch3-201ENSMUST00000023491 5536 ntAPPRIS P3 TSL 1 (best) BASIC16.77■□□□□ 0.27
Trbv2A0A0B4J1G8 Eid2b-201ENSMUST00000094651 1751 ntAPPRIS P1 BASIC16.77■□□□□ 0.27
Trbv2A0A0B4J1G8 Mdfi-201ENSMUST00000035375 1371 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
Trbv2A0A0B4J1G8 3010003L21Rik-201ENSMUST00000047953 1729 ntTSL 5 BASIC16.76■□□□□ 0.27
Trbv2A0A0B4J1G8 Bicdl1-203ENSMUST00000118576 1874 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
Trbv2A0A0B4J1G8 A630072M18Rik-201ENSMUST00000190567 5410 ntBASIC16.76■□□□□ 0.27
Trbv2A0A0B4J1G8 Wnk2-211ENSMUST00000162581 6628 ntAPPRIS ALT2 TSL 5 BASIC16.76■□□□□ 0.27
Trbv2A0A0B4J1G8 Plekhg3-201ENSMUST00000075249 5138 ntAPPRIS P2 TSL 1 (best) BASIC16.76■□□□□ 0.27
Trbv2A0A0B4J1G8 Gm26689-201ENSMUST00000180927 1818 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
Trbv2A0A0B4J1G8 Gm26553-201ENSMUST00000181531 1818 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
Trbv2A0A0B4J1G8 Dtymk-202ENSMUST00000112890 1055 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
Trbv2A0A0B4J1G8 Serbp1-212ENSMUST00000204294 717 ntTSL 5 BASIC16.76■□□□□ 0.27
Trbv2A0A0B4J1G8 Gm5812-201ENSMUST00000061073 957 ntBASIC16.76■□□□□ 0.27
Trbv2A0A0B4J1G8 Acbd6-203ENSMUST00000097529 1255 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
Trbv2A0A0B4J1G8 Cdca4-202ENSMUST00000220899 1994 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Trbv2A0A0B4J1G8 Klf16-201ENSMUST00000038558 2674 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Trbv2A0A0B4J1G8 Nr1h2-202ENSMUST00000107910 1948 ntAPPRIS ALT2 TSL 1 (best) BASIC16.76■□□□□ 0.27
Trbv2A0A0B4J1G8 Pycr2-201ENSMUST00000027802 1580 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Trbv2A0A0B4J1G8 Dixdc1-207ENSMUST00000121634 2420 ntTSL 5 BASIC16.76■□□□□ 0.27
Trbv2A0A0B4J1G8 Jph1-201ENSMUST00000038382 4809 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Trbv2A0A0B4J1G8 Gpc3-202ENSMUST00000114857 1880 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
Trbv2A0A0B4J1G8 0610040J01Rik-201ENSMUST00000081747 2008 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Trbv2A0A0B4J1G8 Kat14-201ENSMUST00000028911 3801 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Trbv2A0A0B4J1G8 Bhlhe22-201ENSMUST00000026120 3344 ntAPPRIS P1 BASIC16.75■□□□□ 0.27
Trbv2A0A0B4J1G8 2310035C23Rik-202ENSMUST00000086721 5414 ntAPPRIS ALT2 TSL 5 BASIC16.75■□□□□ 0.27
Trbv2A0A0B4J1G8 Marcks-201ENSMUST00000092584 4048 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Trbv2A0A0B4J1G8 Cxadr-201ENSMUST00000023572 5734 ntAPPRIS P3 TSL 1 (best) BASIC16.75■□□□□ 0.27
Trbv2A0A0B4J1G8 Alg1-201ENSMUST00000049207 1669 ntAPPRIS ALT2 TSL 2 BASIC16.75■□□□□ 0.27
Trbv2A0A0B4J1G8 Hpca-204ENSMUST00000116444 1847 ntAPPRIS P1 TSL 5 BASIC16.75■□□□□ 0.27
Trbv2A0A0B4J1G8 Gm43042-201ENSMUST00000198676 1820 ntTSL 5 BASIC16.75■□□□□ 0.27
Trbv2A0A0B4J1G8 Csnk1e-203ENSMUST00000122044 3174 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
Trbv2A0A0B4J1G8 Gm3020-202ENSMUST00000167430 1933 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Trbv2A0A0B4J1G8 Gm10409-201ENSMUST00000170123 1933 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Trbv2A0A0B4J1G8 Itgb5-201ENSMUST00000069345 3056 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
Trbv2A0A0B4J1G8 Kras-202ENSMUST00000111710 1194 ntTSL 5 BASIC16.74■□□□□ 0.27
Trbv2A0A0B4J1G8 3830408C21Rik-206ENSMUST00000225489 1810 ntBASIC16.74■□□□□ 0.27
Trbv2A0A0B4J1G8 Tekt5-201ENSMUST00000043415 1803 ntAPPRIS ALT2 TSL 1 (best) BASIC16.74■□□□□ 0.27
Trbv2A0A0B4J1G8 Inppl1-202ENSMUST00000165052 4730 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Trbv2A0A0B4J1G8 Lifr-202ENSMUST00000164529 2844 ntAPPRIS ALT2 TSL 1 (best) BASIC16.74■□□□□ 0.27
Trbv2A0A0B4J1G8 Syncrip-205ENSMUST00000173801 2944 ntAPPRIS ALT1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Trbv2A0A0B4J1G8 Rchy1-201ENSMUST00000031345 1967 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Trbv2A0A0B4J1G8 Cldn23-201ENSMUST00000060128 1848 ntAPPRIS P1 BASIC16.73■□□□□ 0.27
Trbv2A0A0B4J1G8 Ythdc1-202ENSMUST00000119339 3222 ntAPPRIS ALT2 TSL 5 BASIC16.73■□□□□ 0.27
Trbv2A0A0B4J1G8 Gm28417-201ENSMUST00000185218 785 ntTSL 3 BASIC16.73■□□□□ 0.27
Trbv2A0A0B4J1G8 Gm9959-201ENSMUST00000068277 390 ntBASIC16.73■□□□□ 0.27
Trbv2A0A0B4J1G8 Sigmar1-202ENSMUST00000071561 1547 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
Trbv2A0A0B4J1G8 F8a-201ENSMUST00000105111 2505 ntAPPRIS P1 BASIC16.73■□□□□ 0.27
Trbv2A0A0B4J1G8 Ppa1-201ENSMUST00000020286 1364 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Trbv2A0A0B4J1G8 Agpat3-201ENSMUST00000001240 5980 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Trbv2A0A0B4J1G8 Nhlh1-201ENSMUST00000059794 2464 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Trbv2A0A0B4J1G8 Atf5-202ENSMUST00000107893 1735 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Trbv2A0A0B4J1G8 4930412F12Rik-201ENSMUST00000211700 1471 ntBASIC16.73■□□□□ 0.27
Trbv2A0A0B4J1G8 Tmtc1-202ENSMUST00000100772 8269 ntTSL 2 BASIC16.73■□□□□ 0.27
Trbv2A0A0B4J1G8 Unc119-201ENSMUST00000002127 1329 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Trbv2A0A0B4J1G8 Stmn4-201ENSMUST00000074523 1303 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Trbv2A0A0B4J1G8 Hoxa1-202ENSMUST00000120363 2043 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
Trbv2A0A0B4J1G8 Il4i1-201ENSMUST00000033015 2048 ntAPPRIS P3 TSL 1 (best) BASIC16.72■□□□□ 0.27
Trbv2A0A0B4J1G8 Gm9828-202ENSMUST00000126622 1446 ntTSL 3 BASIC16.72■□□□□ 0.27
Trbv2A0A0B4J1G8 Ssc4d-204ENSMUST00000111153 2745 ntAPPRIS P1 TSL 5 BASIC16.72■□□□□ 0.27
Trbv2A0A0B4J1G8 Tuba3b-201ENSMUST00000087445 1775 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Trbv2A0A0B4J1G8 Mrm1-201ENSMUST00000018549 2477 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Trbv2A0A0B4J1G8 Slc30a4-202ENSMUST00000099457 3170 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
Trbv2A0A0B4J1G8 Insig2-201ENSMUST00000003818 2697 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Trbv2A0A0B4J1G8 Gm10941-201ENSMUST00000105408 708 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
Trbv2A0A0B4J1G8 Gm15546-201ENSMUST00000122095 826 ntBASIC16.72■□□□□ 0.27
Trbv2A0A0B4J1G8 Hirip3-201ENSMUST00000037248 2766 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Trbv2A0A0B4J1G8 Igsf9b-201ENSMUST00000115247 2857 ntAPPRIS ALT2 TSL 1 (best) BASIC16.72■□□□□ 0.27
Trbv2A0A0B4J1G8 Zfp697-201ENSMUST00000056096 5166 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Trbv2A0A0B4J1G8 Gm21949-201ENSMUST00000182006 2369 ntAPPRIS P1 TSL 2 BASIC16.72■□□□□ 0.27
Trbv2A0A0B4J1G8 Chmp6-201ENSMUST00000026434 1557 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Trbv2A0A0B4J1G8 Rnf44-208ENSMUST00000128257 1689 ntTSL 5 BASIC16.72■□□□□ 0.27
Trbv2A0A0B4J1G8 Gm45606-201ENSMUST00000209836 2795 ntBASIC16.72■□□□□ 0.27
Trbv2A0A0B4J1G8 Ciz1-201ENSMUST00000048964 2771 ntAPPRIS P3 TSL 1 (best) BASIC16.72■□□□□ 0.27
Trbv2A0A0B4J1G8 Mgll-202ENSMUST00000113581 1308 ntTSL 5 BASIC16.71■□□□□ 0.27
Trbv2A0A0B4J1G8 Gm42922-201ENSMUST00000195887 2078 ntBASIC16.71■□□□□ 0.27
Trbv2A0A0B4J1G8 Klhl25-202ENSMUST00000171155 3403 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Trbv2A0A0B4J1G8 Fam129b-201ENSMUST00000028135 3714 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Trbv2A0A0B4J1G8 Prodh-206ENSMUST00000139861 677 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
Trbv2A0A0B4J1G8 4930539J05Rik-202ENSMUST00000182865 511 ntTSL 2 BASIC16.71■□□□□ 0.27
Trbv2A0A0B4J1G8 Pmvk-201ENSMUST00000029564 1194 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Trbv2A0A0B4J1G8 Dmtn-207ENSMUST00000228001 2437 ntBASIC16.71■□□□□ 0.27
Trbv2A0A0B4J1G8 Brms1l-201ENSMUST00000059250 2609 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Trbv2A0A0B4J1G8 Khdc3-201ENSMUST00000034737 1681 ntAPPRIS P3 TSL 1 (best) BASIC16.71■□□□□ 0.27
Trbv2A0A0B4J1G8 Med14-201ENSMUST00000076016 2561 ntAPPRIS ALT2 TSL 1 (best) BASIC16.71■□□□□ 0.26
Trbv2A0A0B4J1G8 Nat14-204ENSMUST00000207687 1415 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Trbv2A0A0B4J1G8 Mag-207ENSMUST00000191081 2007 ntAPPRIS ALT1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Trbv2A0A0B4J1G8 Gm4675-202ENSMUST00000164755 2322 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
Trbv2A0A0B4J1G8 Faxc-201ENSMUST00000029908 2627 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Trbv2A0A0B4J1G8 Hmgxb3-201ENSMUST00000091884 5101 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Trbv2A0A0B4J1G8 Atxn2-201ENSMUST00000051950 4472 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Trbv2A0A0B4J1G8 Cnpy1-201ENSMUST00000117098 2661 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
Trbv2A0A0B4J1G8 Creg1-202ENSMUST00000111432 2163 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Retrieved 100 of 76,532 protein–RNA pairs in 16.2 ms