Protein–RNA interactions for Protein: A0A0A6YXN5

Ighv1-43, Immunoglobulin heavy variable V1-43 (Fragment), mousemouse

Predictions only

Length 117 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ighv1-43A0A0A6YXN5 Lpcat3-201ENSMUST00000004381 2281 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Ighv1-43A0A0A6YXN5 Chtop-207ENSMUST00000107346 1321 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
Ighv1-43A0A0A6YXN5 Thra-201ENSMUST00000064187 2452 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
Ighv1-43A0A0A6YXN5 6030419C18Rik-201ENSMUST00000085658 2139 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Ighv1-43A0A0A6YXN5 Arrb2-205ENSMUST00000108568 1777 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
Ighv1-43A0A0A6YXN5 Acot7-201ENSMUST00000030779 1425 ntAPPRIS ALT2 TSL 1 (best) BASIC17.48■□□□□ 0.39
Ighv1-43A0A0A6YXN5 Elf2-212ENSMUST00000194641 5919 ntAPPRIS P3 TSL 5 BASIC17.48■□□□□ 0.39
Ighv1-43A0A0A6YXN5 Ccdc34-201ENSMUST00000028580 2070 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Ighv1-43A0A0A6YXN5 Arpc5-202ENSMUST00000097536 1737 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
Ighv1-43A0A0A6YXN5 Arl2bp-202ENSMUST00000109527 1133 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
Ighv1-43A0A0A6YXN5 Fam98c-203ENSMUST00000134176 1189 ntTSL 2 BASIC17.48■□□□□ 0.39
Ighv1-43A0A0A6YXN5 Gm44238-201ENSMUST00000203300 353 ntTSL 3 BASIC17.48■□□□□ 0.39
Ighv1-43A0A0A6YXN5 1700018M17Rik-201ENSMUST00000052502 456 ntBASIC17.48■□□□□ 0.39
Ighv1-43A0A0A6YXN5 Plin1-202ENSMUST00000178257 1841 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Ighv1-43A0A0A6YXN5 Lpar3-201ENSMUST00000039164 2464 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Ighv1-43A0A0A6YXN5 Baiap2-203ENSMUST00000103021 3398 ntAPPRIS ALT2 TSL 1 (best) BASIC17.48■□□□□ 0.39
Ighv1-43A0A0A6YXN5 Magi3-201ENSMUST00000064371 6640 ntAPPRIS P3 TSL 1 (best) BASIC17.47■□□□□ 0.39
Ighv1-43A0A0A6YXN5 E4f1-201ENSMUST00000056032 2574 ntAPPRIS P2 TSL 1 (best) BASIC17.47■□□□□ 0.39
Ighv1-43A0A0A6YXN5 Tcf7-202ENSMUST00000109071 1742 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Ighv1-43A0A0A6YXN5 Gm11627-202ENSMUST00000107081 818 ntAPPRIS P1 TSL 2 BASIC17.47■□□□□ 0.39
Ighv1-43A0A0A6YXN5 Sp3os-201ENSMUST00000123087 583 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
Ighv1-43A0A0A6YXN5 Gng2-202ENSMUST00000159028 458 ntAPPRIS P1 TSL 2 BASIC17.47■□□□□ 0.39
Ighv1-43A0A0A6YXN5 2310068J16Rik-201ENSMUST00000188271 1124 ntBASIC17.47■□□□□ 0.39
Ighv1-43A0A0A6YXN5 Rabac1-203ENSMUST00000205871 986 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
Ighv1-43A0A0A6YXN5 Prmt1-205ENSMUST00000207659 945 ntTSL 5 BASIC17.47■□□□□ 0.39
Ighv1-43A0A0A6YXN5 1110004E09Rik-201ENSMUST00000023694 1143 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Ighv1-43A0A0A6YXN5 Prmt1-201ENSMUST00000045325 1071 ntTSL 5 BASIC17.47■□□□□ 0.39
Ighv1-43A0A0A6YXN5 Vgll2-201ENSMUST00000058347 966 ntAPPRIS ALT2 TSL 1 (best) BASIC17.47■□□□□ 0.39
Ighv1-43A0A0A6YXN5 Gm10065-201ENSMUST00000076238 345 ntAPPRIS P1 BASIC17.47■□□□□ 0.39
Ighv1-43A0A0A6YXN5 Pitx3-201ENSMUST00000026259 1380 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Ighv1-43A0A0A6YXN5 Gm15441-202ENSMUST00000107095 1653 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
Ighv1-43A0A0A6YXN5 Rcan3-201ENSMUST00000030606 5111 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Ighv1-43A0A0A6YXN5 Gal3st3-201ENSMUST00000061169 2421 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Ighv1-43A0A0A6YXN5 Chtop-202ENSMUST00000049937 2012 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Ighv1-43A0A0A6YXN5 Gpr137c-207ENSMUST00000227086 4997 ntAPPRIS ALT2 BASIC17.46■□□□□ 0.39
Ighv1-43A0A0A6YXN5 Nup153-201ENSMUST00000021803 6109 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Ighv1-43A0A0A6YXN5 Aunip-201ENSMUST00000105866 1275 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Ighv1-43A0A0A6YXN5 5730522E02Rik-201ENSMUST00000109511 1162 ntAPPRIS P5 TSL 1 (best) BASIC17.46■□□□□ 0.39
Ighv1-43A0A0A6YXN5 Gm26524-201ENSMUST00000192339 390 ntBASIC17.46■□□□□ 0.39
Ighv1-43A0A0A6YXN5 1810059H22Rik-205ENSMUST00000204570 690 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
Ighv1-43A0A0A6YXN5 Smn1-201ENSMUST00000022147 1222 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Ighv1-43A0A0A6YXN5 Park7-201ENSMUST00000030805 908 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Ighv1-43A0A0A6YXN5 1700028I16Rik-201ENSMUST00000076984 1048 ntTSL 5 BASIC17.46■□□□□ 0.39
Ighv1-43A0A0A6YXN5 Naglu-201ENSMUST00000001802 2560 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Ighv1-43A0A0A6YXN5 Gm37563-201ENSMUST00000192580 1513 ntBASIC17.46■□□□□ 0.39
Ighv1-43A0A0A6YXN5 Rad1-201ENSMUST00000022856 1514 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Ighv1-43A0A0A6YXN5 Tcp11-201ENSMUST00000042692 1984 ntAPPRIS P3 TSL 1 (best) BASIC17.46■□□□□ 0.39
Ighv1-43A0A0A6YXN5 Siah2-201ENSMUST00000070368 2511 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.38
Ighv1-43A0A0A6YXN5 Gpc3-202ENSMUST00000114857 1880 ntTSL 1 (best) BASIC17.46■□□□□ 0.38
Ighv1-43A0A0A6YXN5 Slc11a1-211ENSMUST00000187516 1893 ntAPPRIS ALT2 TSL 5 BASIC17.46■□□□□ 0.38
Ighv1-43A0A0A6YXN5 Eif1-201ENSMUST00000049385 1322 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.38
Ighv1-43A0A0A6YXN5 Mxi1-202ENSMUST00000025998 4996 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.38
Ighv1-43A0A0A6YXN5 Dmrt1-201ENSMUST00000025755 2340 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.38
Ighv1-43A0A0A6YXN5 AC165249.1-201ENSMUST00000220031 1599 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
Ighv1-43A0A0A6YXN5 Aars-201ENSMUST00000034441 5750 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Ighv1-43A0A0A6YXN5 Metrn-202ENSMUST00000165838 1363 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Ighv1-43A0A0A6YXN5 Wdr20-205ENSMUST00000193053 1351 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
Ighv1-43A0A0A6YXN5 Gnas-208ENSMUST00000109087 1716 ntAPPRIS P4 TSL 1 (best) BASIC17.45■□□□□ 0.38
Ighv1-43A0A0A6YXN5 Map3k21-201ENSMUST00000034316 5693 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Ighv1-43A0A0A6YXN5 Acot8-202ENSMUST00000103094 1152 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Ighv1-43A0A0A6YXN5 Gm11713-201ENSMUST00000139941 523 ntTSL 3 BASIC17.45■□□□□ 0.38
Ighv1-43A0A0A6YXN5 Gm17041-201ENSMUST00000163196 479 ntTSL 3 BASIC17.45■□□□□ 0.38
Ighv1-43A0A0A6YXN5 Acot8-201ENSMUST00000017451 1055 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
Ighv1-43A0A0A6YXN5 Timp4-202ENSMUST00000205131 945 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
Ighv1-43A0A0A6YXN5 AC122769.4-201ENSMUST00000228166 901 ntBASIC17.45■□□□□ 0.38
Ighv1-43A0A0A6YXN5 Dvl1-201ENSMUST00000030948 3358 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Ighv1-43A0A0A6YXN5 Slc26a10-201ENSMUST00000095270 2215 ntAPPRIS P2 TSL 5 BASIC17.45■□□□□ 0.38
Ighv1-43A0A0A6YXN5 Snapc2-201ENSMUST00000011981 1536 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Ighv1-43A0A0A6YXN5 Khdc3-201ENSMUST00000034737 1681 ntAPPRIS P3 TSL 1 (best) BASIC17.45■□□□□ 0.38
Ighv1-43A0A0A6YXN5 Spint1-203ENSMUST00000110817 2323 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Ighv1-43A0A0A6YXN5 Galnt11-201ENSMUST00000045737 2552 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Ighv1-43A0A0A6YXN5 Clasp2-211ENSMUST00000216817 2234 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
Ighv1-43A0A0A6YXN5 Nhlh1-201ENSMUST00000059794 2464 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Ighv1-43A0A0A6YXN5 Ube2i-213ENSMUST00000174031 824 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Ighv1-43A0A0A6YXN5 Hist2h2aa2-201ENSMUST00000074976 528 ntAPPRIS P1 BASIC17.44■□□□□ 0.38
Ighv1-43A0A0A6YXN5 Hist2h2aa1-201ENSMUST00000078756 586 ntAPPRIS P1 BASIC17.44■□□□□ 0.38
Ighv1-43A0A0A6YXN5 Gm37352-201ENSMUST00000193908 2181 ntBASIC17.44■□□□□ 0.38
Ighv1-43A0A0A6YXN5 Ciapin1-201ENSMUST00000034233 1807 ntAPPRIS P1 TSL 5 BASIC17.44■□□□□ 0.38
Ighv1-43A0A0A6YXN5 Nol7-201ENSMUST00000071926 1800 ntAPPRIS P2 TSL 1 (best) BASIC17.44■□□□□ 0.38
Ighv1-43A0A0A6YXN5 Gm13509-201ENSMUST00000119733 1308 ntBASIC17.44■□□□□ 0.38
Ighv1-43A0A0A6YXN5 Gm26660-201ENSMUST00000181582 2543 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
Ighv1-43A0A0A6YXN5 Paip1-201ENSMUST00000026520 2551 ntAPPRIS P3 TSL 1 (best) BASIC17.43■□□□□ 0.38
Ighv1-43A0A0A6YXN5 Anapc16-201ENSMUST00000020307 1379 ntTSL 2 BASIC17.43■□□□□ 0.38
Ighv1-43A0A0A6YXN5 Sra1-201ENSMUST00000001415 2061 ntAPPRIS P4 TSL 5 BASIC17.43■□□□□ 0.38
Ighv1-43A0A0A6YXN5 Vkorc1-202ENSMUST00000119922 387 ntTSL 3 BASIC17.43■□□□□ 0.38
Ighv1-43A0A0A6YXN5 Nudt8-203ENSMUST00000122924 1082 ntTSL 2 BASIC17.43■□□□□ 0.38
Ighv1-43A0A0A6YXN5 Gm12473-201ENSMUST00000137535 579 ntTSL 5 BASIC17.43■□□□□ 0.38
Ighv1-43A0A0A6YXN5 Gm16764-202ENSMUST00000148931 433 ntTSL 5 BASIC17.43■□□□□ 0.38
Ighv1-43A0A0A6YXN5 Gm19094-201ENSMUST00000209791 1246 ntBASIC17.43■□□□□ 0.38
Ighv1-43A0A0A6YXN5 Rab3c-203ENSMUST00000224180 967 ntBASIC17.43■□□□□ 0.38
Ighv1-43A0A0A6YXN5 Tmem54-201ENSMUST00000030575 1064 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
Ighv1-43A0A0A6YXN5 Nat8-201ENSMUST00000032073 1123 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Ighv1-43A0A0A6YXN5 H19-202ENSMUST00000136359 2286 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
Ighv1-43A0A0A6YXN5 Map2k2-207ENSMUST00000143517 2405 ntAPPRIS P3 TSL 1 (best) BASIC17.43■□□□□ 0.38
Ighv1-43A0A0A6YXN5 Scube1-202ENSMUST00000043634 5161 ntAPPRIS ALT2 TSL 1 (best) BASIC17.43■□□□□ 0.38
Ighv1-43A0A0A6YXN5 Gdf1-201ENSMUST00000207684 1349 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Ighv1-43A0A0A6YXN5 1810010K12Rik-201ENSMUST00000070378 1324 ntBASIC17.43■□□□□ 0.38
Ighv1-43A0A0A6YXN5 Dstn-201ENSMUST00000103172 1911 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Ighv1-43A0A0A6YXN5 Fam105a-201ENSMUST00000100739 2867 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
Ighv1-43A0A0A6YXN5 Kirrel3-202ENSMUST00000115148 2851 ntAPPRIS P3 TSL 5 BASIC17.42■□□□□ 0.38
Retrieved 100 of 76,532 protein–RNA pairs in 21.6 ms