Protein–RNA interactions for Protein: A0A075B6B0

Trav6d-7, T cell receptor alpha variable 6D-7 (Fragment), mousemouse

Predictions only

Length 112 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav6d-7A0A075B6B0 Ankle2-202ENSMUST00000086674 5025 ntAPPRIS ALT2 TSL 5 BASIC14.56□□□□□ -0.08
Trav6d-7A0A075B6B0 Trim67-201ENSMUST00000041106 5694 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Trav6d-7A0A075B6B0 Reep6-207ENSMUST00000186864 2015 ntAPPRIS P3 TSL 1 (best) BASIC14.56□□□□□ -0.08
Trav6d-7A0A075B6B0 Map4k5-203ENSMUST00000110570 4498 ntAPPRIS P5 TSL 5 BASIC14.56□□□□□ -0.08
Trav6d-7A0A075B6B0 Tnfsf11-201ENSMUST00000022592 2236 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Trav6d-7A0A075B6B0 Sox12-201ENSMUST00000063332 4169 ntAPPRIS P1 TSL 2 BASIC14.55□□□□□ -0.08
Trav6d-7A0A075B6B0 Ptprf-201ENSMUST00000049074 7656 ntAPPRIS P1 TSL 5 BASIC14.55□□□□□ -0.08
Trav6d-7A0A075B6B0 C630004M23Rik-201ENSMUST00000194765 1682 ntBASIC14.55□□□□□ -0.08
Trav6d-7A0A075B6B0 Atrnl1-201ENSMUST00000077282 6581 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Trav6d-7A0A075B6B0 Plekhg3-207ENSMUST00000219063 4535 ntAPPRIS ALT2 TSL 5 BASIC14.55□□□□□ -0.08
Trav6d-7A0A075B6B0 Dgke-202ENSMUST00000107894 8347 ntAPPRIS P1 TSL 5 BASIC14.55□□□□□ -0.08
Trav6d-7A0A075B6B0 Klf16-201ENSMUST00000038558 2674 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Trav6d-7A0A075B6B0 Cd47-201ENSMUST00000084838 5277 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Trav6d-7A0A075B6B0 Gm26881-201ENSMUST00000180426 593 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
Trav6d-7A0A075B6B0 Gpx7-201ENSMUST00000030332 1289 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Trav6d-7A0A075B6B0 Ninj1-201ENSMUST00000049022 1187 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Trav6d-7A0A075B6B0 Rtn4rl2-201ENSMUST00000054514 1263 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Trav6d-7A0A075B6B0 1700012B09Rik-201ENSMUST00000060330 688 ntAPPRIS P2 TSL 1 (best) BASIC14.55□□□□□ -0.08
Trav6d-7A0A075B6B0 Cdc20-201ENSMUST00000006565 1793 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Trav6d-7A0A075B6B0 R3hdm4-201ENSMUST00000045628 1898 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Trav6d-7A0A075B6B0 Soat2-201ENSMUST00000023806 2213 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Trav6d-7A0A075B6B0 Gm20100-201ENSMUST00000209418 2272 ntBASIC14.54□□□□□ -0.08
Trav6d-7A0A075B6B0 Palm-202ENSMUST00000105379 2519 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
Trav6d-7A0A075B6B0 Cdkl3-207ENSMUST00000109080 2749 ntAPPRIS ALT2 TSL 1 (best) BASIC14.54□□□□□ -0.08
Trav6d-7A0A075B6B0 Arih1-207ENSMUST00000171975 6971 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Trav6d-7A0A075B6B0 Slk-201ENSMUST00000026043 7278 ntAPPRIS ALT2 TSL 1 (best) BASIC14.54□□□□□ -0.08
Trav6d-7A0A075B6B0 1810022K09Rik-201ENSMUST00000108365 559 ntAPPRIS ALT2 TSL 1 (best) BASIC14.54□□□□□ -0.08
Trav6d-7A0A075B6B0 Wdfy1-202ENSMUST00000113510 704 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
Trav6d-7A0A075B6B0 Wdfy1-203ENSMUST00000113511 704 ntTSL 5 BASIC14.54□□□□□ -0.08
Trav6d-7A0A075B6B0 Paip2-204ENSMUST00000115736 857 ntAPPRIS P1 TSL 3 BASIC14.54□□□□□ -0.08
Trav6d-7A0A075B6B0 Paip2-205ENSMUST00000115737 713 ntAPPRIS P1 TSL 3 BASIC14.54□□□□□ -0.08
Trav6d-7A0A075B6B0 Gm26833-201ENSMUST00000180899 440 ntBASIC14.54□□□□□ -0.08
Trav6d-7A0A075B6B0 Wdfy1-201ENSMUST00000048820 717 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
Trav6d-7A0A075B6B0 Gm11747-201ENSMUST00000142751 1648 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
Trav6d-7A0A075B6B0 Ciapin1-201ENSMUST00000034233 1807 ntAPPRIS P1 TSL 5 BASIC14.54□□□□□ -0.08
Trav6d-7A0A075B6B0 Rabgap1l-216ENSMUST00000195442 1877 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
Trav6d-7A0A075B6B0 Hyal2-207ENSMUST00000195752 2062 ntAPPRIS P2 TSL 5 BASIC14.54□□□□□ -0.08
Trav6d-7A0A075B6B0 Zfp623-201ENSMUST00000037260 2463 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Trav6d-7A0A075B6B0 Phldb3-204ENSMUST00000206422 2564 ntAPPRIS P1 TSL 5 BASIC14.54□□□□□ -0.08
Trav6d-7A0A075B6B0 Sbspon-201ENSMUST00000040695 2748 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Trav6d-7A0A075B6B0 Diaph1-205ENSMUST00000115634 5666 ntAPPRIS P3 TSL 5 BASIC14.54□□□□□ -0.08
Trav6d-7A0A075B6B0 Atp8b2-202ENSMUST00000107396 5705 ntAPPRIS ALT2 TSL 5 BASIC14.54□□□□□ -0.08
Trav6d-7A0A075B6B0 Negr1-202ENSMUST00000074015 4983 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Trav6d-7A0A075B6B0 Col9a3-203ENSMUST00000132527 3046 ntAPPRIS P1 TSL 5 BASIC14.53□□□□□ -0.08
Trav6d-7A0A075B6B0 Nsmf-204ENSMUST00000102931 2830 ntTSL 5 BASIC14.53□□□□□ -0.08
Trav6d-7A0A075B6B0 Epn1-202ENSMUST00000098845 2565 ntAPPRIS P2 TSL 1 (best) BASIC14.53□□□□□ -0.08
Trav6d-7A0A075B6B0 Eefsec-206ENSMUST00000205179 2208 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
Trav6d-7A0A075B6B0 Gm3667-201ENSMUST00000171906 2053 ntAPPRIS P1 TSL 5 BASIC14.53□□□□□ -0.08
Trav6d-7A0A075B6B0 Tcp11-201ENSMUST00000042692 1984 ntAPPRIS P3 TSL 1 (best) BASIC14.53□□□□□ -0.08
Trav6d-7A0A075B6B0 Gm18688-201ENSMUST00000204695 1859 ntBASIC14.53□□□□□ -0.08
Trav6d-7A0A075B6B0 Kis2-201ENSMUST00000133214 1717 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
Trav6d-7A0A075B6B0 Camsap2-201ENSMUST00000048309 7823 ntAPPRIS P3 TSL 5 BASIC14.53□□□□□ -0.08
Trav6d-7A0A075B6B0 Gm6085-201ENSMUST00000182774 1470 ntBASIC14.53□□□□□ -0.08
Trav6d-7A0A075B6B0 Epb41l4aos-201ENSMUST00000146010 430 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
Trav6d-7A0A075B6B0 Rasl10b-201ENSMUST00000021022 996 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Trav6d-7A0A075B6B0 Rps7-203ENSMUST00000221871 820 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Trav6d-7A0A075B6B0 Col4a3bp-202ENSMUST00000109444 5285 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
Trav6d-7A0A075B6B0 Kdm1a-202ENSMUST00000105847 3028 ntAPPRIS ALT2 TSL 5 BASIC14.53□□□□□ -0.08
Trav6d-7A0A075B6B0 Ssc4d-203ENSMUST00000111152 2745 ntAPPRIS P1 TSL 5 BASIC14.53□□□□□ -0.08
Trav6d-7A0A075B6B0 AC122335.2-201ENSMUST00000213901 6181 ntBASIC14.53□□□□□ -0.08
Trav6d-7A0A075B6B0 Cyb5d2-201ENSMUST00000079681 2393 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Trav6d-7A0A075B6B0 AB041806-201ENSMUST00000062902 2105 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
Trav6d-7A0A075B6B0 Sra1-201ENSMUST00000001415 2061 ntAPPRIS P4 TSL 5 BASIC14.53□□□□□ -0.08
Trav6d-7A0A075B6B0 Gm45640-201ENSMUST00000210665 1896 ntBASIC14.52□□□□□ -0.08
Trav6d-7A0A075B6B0 Chd5-202ENSMUST00000030775 9486 ntAPPRIS P3 TSL 5 BASIC14.52□□□□□ -0.08
Trav6d-7A0A075B6B0 Tomm40-201ENSMUST00000032555 1646 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
Trav6d-7A0A075B6B0 Mfsd4a-202ENSMUST00000112365 1536 ntAPPRIS ALT2 TSL 5 BASIC14.52□□□□□ -0.08
Trav6d-7A0A075B6B0 Baiap2-202ENSMUST00000075180 3518 ntAPPRIS ALT2 TSL 1 (best) BASIC14.52□□□□□ -0.08
Trav6d-7A0A075B6B0 Fbxo24-202ENSMUST00000111002 2306 ntTSL 5 BASIC14.52□□□□□ -0.08
Trav6d-7A0A075B6B0 Arhgap44-202ENSMUST00000093001 2256 ntTSL 2 BASIC14.52□□□□□ -0.08
Trav6d-7A0A075B6B0 Cyp4f16-201ENSMUST00000003416 2227 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
Trav6d-7A0A075B6B0 Ppp4r1l-ps-204ENSMUST00000140992 367 ntTSL 3 BASIC14.52□□□□□ -0.09
Trav6d-7A0A075B6B0 AB124611-203ENSMUST00000173769 1188 ntAPPRIS P3 TSL 1 (best) BASIC14.52□□□□□ -0.09
Trav6d-7A0A075B6B0 Gm43173-201ENSMUST00000202246 593 ntBASIC14.52□□□□□ -0.09
Trav6d-7A0A075B6B0 Gm44731-201ENSMUST00000203086 542 ntTSL 3 BASIC14.52□□□□□ -0.09
Trav6d-7A0A075B6B0 Serbp1-216ENSMUST00000205106 1288 ntTSL 5 BASIC14.52□□□□□ -0.09
Trav6d-7A0A075B6B0 Yipf2-203ENSMUST00000180365 2014 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
Trav6d-7A0A075B6B0 Pqlc1-201ENSMUST00000070135 1911 ntAPPRIS ALT2 TSL 1 (best) BASIC14.52□□□□□ -0.09
Trav6d-7A0A075B6B0 Fiz1-202ENSMUST00000165320 2653 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
Trav6d-7A0A075B6B0 Ccser1-203ENSMUST00000126214 5657 ntAPPRIS P1 TSL 5 BASIC14.52□□□□□ -0.09
Trav6d-7A0A075B6B0 Nbn-201ENSMUST00000029879 2533 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
Trav6d-7A0A075B6B0 Erlin1-202ENSMUST00000112028 3136 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
Trav6d-7A0A075B6B0 Pigt-202ENSMUST00000117066 1712 ntAPPRIS ALT2 TSL 1 (best) BASIC14.52□□□□□ -0.09
Trav6d-7A0A075B6B0 Lats2-201ENSMUST00000022531 5191 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
Trav6d-7A0A075B6B0 Sirt1-202ENSMUST00000105442 3740 ntAPPRIS ALT2 TSL 1 (best) BASIC14.52□□□□□ -0.09
Trav6d-7A0A075B6B0 Mcam-201ENSMUST00000034650 2989 ntAPPRIS P2 TSL 1 (best) BASIC14.52□□□□□ -0.09
Trav6d-7A0A075B6B0 Zfp746-203ENSMUST00000203609 3648 ntAPPRIS ALT2 TSL 5 BASIC14.52□□□□□ -0.09
Trav6d-7A0A075B6B0 Map6-206ENSMUST00000208605 2275 ntAPPRIS ALT2 TSL 1 (best) BASIC14.52□□□□□ -0.09
Trav6d-7A0A075B6B0 Pycr2-201ENSMUST00000027802 1580 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Trav6d-7A0A075B6B0 Slc39a10-201ENSMUST00000027131 5498 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Trav6d-7A0A075B6B0 Ltb4r2-201ENSMUST00000044554 1439 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Trav6d-7A0A075B6B0 Ppp1cb-201ENSMUST00000015100 5962 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Trav6d-7A0A075B6B0 Rab40c-207ENSMUST00000167626 2506 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Trav6d-7A0A075B6B0 Fblim1-202ENSMUST00000105784 3036 ntAPPRIS P1 TSL 5 BASIC14.51□□□□□ -0.09
Trav6d-7A0A075B6B0 Parl-201ENSMUST00000048642 1348 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Trav6d-7A0A075B6B0 Gm18284-201ENSMUST00000172604 624 ntBASIC14.51□□□□□ -0.09
Trav6d-7A0A075B6B0 Gm8495-201ENSMUST00000188740 694 ntBASIC14.51□□□□□ -0.09
Trav6d-7A0A075B6B0 6430500D05Rik-201ENSMUST00000198286 1176 ntBASIC14.51□□□□□ -0.09
Trav6d-7A0A075B6B0 Gm20163-202ENSMUST00000212288 989 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
Trav6d-7A0A075B6B0 Nr2c2ap-201ENSMUST00000095273 1161 ntAPPRIS P2 TSL 1 (best) BASIC14.51□□□□□ -0.09
Retrieved 100 of 76,532 protein–RNA pairs in 33.7 ms