Protein–RNA interactions for Protein: A0A075B656

Trav18, T cell receptor alpha variable 18 (Fragment), mousemouse

Predictions only

Length 109 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav18A0A075B656 Nrxn2-204ENSMUST00000113461 5505 ntAPPRIS ALT2 TSL 5 BASIC15.45■□□□□ 0.06
Trav18A0A075B656 Gm28523-201ENSMUST00000190040 1588 ntTSL 1 (best) BASIC15.45■□□□□ 0.06
Trav18A0A075B656 4732440D04Rik-203ENSMUST00000191825 5428 ntBASIC15.45■□□□□ 0.06
Trav18A0A075B656 Qpct-201ENSMUST00000040789 1924 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
Trav18A0A075B656 Taf3-203ENSMUST00000114907 695 ntTSL 1 (best) BASIC15.45■□□□□ 0.06
Trav18A0A075B656 Pde6d-203ENSMUST00000146220 879 ntTSL 2 BASIC15.45■□□□□ 0.06
Trav18A0A075B656 2810001G20Rik-202ENSMUST00000146333 959 ntTSL 3 BASIC15.45■□□□□ 0.06
Trav18A0A075B656 Med31-201ENSMUST00000021157 1161 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
Trav18A0A075B656 Gsc-201ENSMUST00000021513 1268 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
Trav18A0A075B656 Rps7-203ENSMUST00000221871 820 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
Trav18A0A075B656 Spsb4-201ENSMUST00000055433 2720 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
Trav18A0A075B656 Tuba1b-201ENSMUST00000077577 1743 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
Trav18A0A075B656 Zyg11a-202ENSMUST00000106690 2421 ntAPPRIS ALT2 TSL 5 BASIC15.45■□□□□ 0.06
Trav18A0A075B656 Disc1-204ENSMUST00000115885 2408 ntAPPRIS ALT2 TSL 5 BASIC15.45■□□□□ 0.06
Trav18A0A075B656 Disc1-202ENSMUST00000075730 2408 ntAPPRIS P3 TSL 5 BASIC15.45■□□□□ 0.06
Trav18A0A075B656 Fam53a-202ENSMUST00000065119 2009 ntAPPRIS P2 TSL 1 (best) BASIC15.44■□□□□ 0.06
Trav18A0A075B656 Plekhg3-201ENSMUST00000075249 5138 ntAPPRIS P2 TSL 1 (best) BASIC15.44■□□□□ 0.06
Trav18A0A075B656 Zmynd10-201ENSMUST00000010188 1765 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
Trav18A0A075B656 Ccdc3-201ENSMUST00000027988 2670 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
Trav18A0A075B656 Map6-202ENSMUST00000107100 2335 ntAPPRIS ALT2 TSL 1 (best) BASIC15.44■□□□□ 0.06
Trav18A0A075B656 Cdv3-ps-201ENSMUST00000169632 827 ntBASIC15.44■□□□□ 0.06
Trav18A0A075B656 Rps2-208ENSMUST00000170715 998 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
Trav18A0A075B656 Flvcr1-202ENSMUST00000191946 1216 ntBASIC15.44■□□□□ 0.06
Trav18A0A075B656 Rps2-201ENSMUST00000054289 1094 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
Trav18A0A075B656 Krtap5-5-201ENSMUST00000097942 1177 ntAPPRIS P1 BASIC15.44■□□□□ 0.06
Trav18A0A075B656 Pou2f2-206ENSMUST00000108418 1934 ntTSL 1 (best) BASIC15.44■□□□□ 0.06
Trav18A0A075B656 Kctd15-201ENSMUST00000032709 2480 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
Trav18A0A075B656 Cebpg-202ENSMUST00000130491 4709 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
Trav18A0A075B656 Coq9-201ENSMUST00000034234 1789 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
Trav18A0A075B656 Jph1-201ENSMUST00000038382 4809 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
Trav18A0A075B656 Itga9-201ENSMUST00000044165 7020 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
Trav18A0A075B656 Dmwd-202ENSMUST00000108479 2388 ntAPPRIS ALT2 TSL 5 BASIC15.43■□□□□ 0.06
Trav18A0A075B656 Fam105a-203ENSMUST00000226170 3043 ntBASIC15.43■□□□□ 0.06
Trav18A0A075B656 Polr3gl-204ENSMUST00000145001 607 ntTSL 3 BASIC15.43■□□□□ 0.06
Trav18A0A075B656 Igfbp7-202ENSMUST00000163898 1200 ntAPPRIS P4 TSL 5 BASIC15.43■□□□□ 0.06
Trav18A0A075B656 4933406I18Rik-202ENSMUST00000163996 904 ntTSL 1 (best) BASIC15.43■□□□□ 0.06
Trav18A0A075B656 Tmem196-202ENSMUST00000183694 845 ntTSL 3 BASIC15.43■□□□□ 0.06
Trav18A0A075B656 C2cd4a-201ENSMUST00000054500 1395 ntAPPRIS P1 TSL 5 BASIC15.43■□□□□ 0.06
Trav18A0A075B656 Alg1-201ENSMUST00000049207 1669 ntAPPRIS ALT2 TSL 2 BASIC15.43■□□□□ 0.06
Trav18A0A075B656 Irak1bp1-202ENSMUST00000113245 2158 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
Trav18A0A075B656 Gp5-201ENSMUST00000061190 2196 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
Trav18A0A075B656 Tmem62-201ENSMUST00000067582 2921 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
Trav18A0A075B656 Sema3c-201ENSMUST00000030568 5491 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
Trav18A0A075B656 Dnajb2-206ENSMUST00000187058 1732 ntTSL 1 (best) BASIC15.43■□□□□ 0.06
Trav18A0A075B656 3010003L21Rik-201ENSMUST00000047953 1729 ntTSL 5 BASIC15.43■□□□□ 0.06
Trav18A0A075B656 Rhobtb3-201ENSMUST00000022078 4980 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
Trav18A0A075B656 Rchy1-201ENSMUST00000031345 1967 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
Trav18A0A075B656 Kcns3-201ENSMUST00000055673 2933 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
Trav18A0A075B656 Cyb5r4-201ENSMUST00000168529 2644 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
Trav18A0A075B656 Camk1-201ENSMUST00000032409 1496 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
Trav18A0A075B656 Olig2-201ENSMUST00000035608 2437 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
Trav18A0A075B656 Epb41l4aos-201ENSMUST00000146010 430 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
Trav18A0A075B656 Tex30-212ENSMUST00000152239 1046 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
Trav18A0A075B656 Gm21956-201ENSMUST00000179946 522 ntBASIC15.42■□□□□ 0.06
Trav18A0A075B656 4930539J05Rik-202ENSMUST00000182865 511 ntTSL 2 BASIC15.42■□□□□ 0.06
Trav18A0A075B656 Gpx4-201ENSMUST00000097227 995 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
Trav18A0A075B656 Phf23-204ENSMUST00000133485 1607 ntTSL 5 BASIC15.42■□□□□ 0.06
Trav18A0A075B656 Fcmr-201ENSMUST00000038829 1600 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
Trav18A0A075B656 D030056L22Rik-201ENSMUST00000055792 1631 ntAPPRIS P2 TSL 1 (best) BASIC15.42■□□□□ 0.06
Trav18A0A075B656 Asap2-202ENSMUST00000064595 5678 ntAPPRIS P4 TSL 5 BASIC15.42■□□□□ 0.06
Trav18A0A075B656 Trak1-209ENSMUST00000210798 5363 ntAPPRIS ALT2 TSL 1 (best) BASIC15.42■□□□□ 0.06
Trav18A0A075B656 Prmt3-201ENSMUST00000032715 2507 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
Trav18A0A075B656 Foxf1-201ENSMUST00000181504 2415 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
Trav18A0A075B656 Parl-201ENSMUST00000048642 1348 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
Trav18A0A075B656 Bcl11b-203ENSMUST00000109891 2888 ntAPPRIS ALT2 TSL 1 (best) BASIC15.42■□□□□ 0.06
Trav18A0A075B656 Mark2-203ENSMUST00000051711 2867 ntAPPRIS P4 TSL 1 (best) BASIC15.42■□□□□ 0.06
Trav18A0A075B656 Ezh2-204ENSMUST00000114618 2775 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
Trav18A0A075B656 Espn-210ENSMUST00000105656 1593 ntTSL 5 BASIC15.41■□□□□ 0.06
Trav18A0A075B656 Pqlc1-207ENSMUST00000140594 2356 ntAPPRIS P3 TSL 1 (best) BASIC15.41■□□□□ 0.06
Trav18A0A075B656 Pgs1-203ENSMUST00000132676 2863 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Trav18A0A075B656 Pgam5-202ENSMUST00000112505 2098 ntAPPRIS ALT1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Trav18A0A075B656 Trim67-201ENSMUST00000041106 5694 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Trav18A0A075B656 Impdh2-201ENSMUST00000081111 1858 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Trav18A0A075B656 Slc35f4-201ENSMUST00000074368 1931 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Trav18A0A075B656 Bag1-202ENSMUST00000108089 1336 ntAPPRIS ALT2 TSL 1 (best) BASIC15.41■□□□□ 0.06
Trav18A0A075B656 Azi2-205ENSMUST00000133580 2156 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Trav18A0A075B656 Cyp4f15-204ENSMUST00000168171 2168 ntAPPRIS P3 TSL 1 (best) BASIC15.41■□□□□ 0.06
Trav18A0A075B656 Lpcat2-205ENSMUST00000210099 2179 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
Trav18A0A075B656 Rbm43-201ENSMUST00000102767 2057 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Trav18A0A075B656 Cdkl3-206ENSMUST00000109079 2051 ntAPPRIS ALT2 TSL 5 BASIC15.4■□□□□ 0.06
Trav18A0A075B656 Cdkl3-208ENSMUST00000109081 2063 ntAPPRIS ALT2 TSL 5 BASIC15.4■□□□□ 0.06
Trav18A0A075B656 Csf1-203ENSMUST00000120243 2097 ntAPPRIS P3 TSL 1 (best) BASIC15.4■□□□□ 0.06
Trav18A0A075B656 Csnk1e-203ENSMUST00000122044 3174 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
Trav18A0A075B656 Fbxo17-201ENSMUST00000032818 1958 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Trav18A0A075B656 Cct4-201ENSMUST00000020562 1634 ntTSL 5 BASIC15.4■□□□□ 0.06
Trav18A0A075B656 Kazald1-201ENSMUST00000026234 1380 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Trav18A0A075B656 Faxc-201ENSMUST00000029908 2627 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Trav18A0A075B656 Mex3b-201ENSMUST00000082237 3355 ntAPPRIS P1 TSL 2 BASIC15.4■□□□□ 0.06
Trav18A0A075B656 Zfp821-206ENSMUST00000212964 2033 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
Trav18A0A075B656 Pno1-201ENSMUST00000020317 1544 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Trav18A0A075B656 Tarbp2-202ENSMUST00000100168 1278 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
Trav18A0A075B656 Fbxl15-202ENSMUST00000177667 1243 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Trav18A0A075B656 Gm3448-202ENSMUST00000097400 747 ntAPPRIS ALT2 TSL 5 BASIC15.4■□□□□ 0.06
Trav18A0A075B656 Cacnb3-201ENSMUST00000003442 2819 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Trav18A0A075B656 Fbxo30-201ENSMUST00000070300 2492 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Trav18A0A075B656 Tlcd1-202ENSMUST00000098545 2897 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
Trav18A0A075B656 Pla2g12a-201ENSMUST00000029629 1561 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Trav18A0A075B656 Antxr1-201ENSMUST00000042025 5253 ntAPPRIS P2 TSL 1 (best) BASIC15.4■□□□□ 0.06
Trav18A0A075B656 Anapc5-203ENSMUST00000196640 2422 ntAPPRIS ALT2 TSL 1 (best) BASIC15.39■□□□□ 0.05
Trav18A0A075B656 Larp6-201ENSMUST00000038407 2440 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Retrieved 100 of 76,532 protein–RNA pairs in 25.3 ms