Protein–RNA interactions for Protein: A0A075B650

Trav15-2-dv6-2, T cell receptor alpha variable 15-2-DV6-2 (Fragment), mousemouse

Predictions only

Length 123 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav15-2-dv6-2A0A075B650 Gm14424-201ENSMUST00000143191 895 ntTSL 1 (best) BASIC15.44■□□□□ 0.06
Trav15-2-dv6-2A0A075B650 Gm22238-201ENSMUST00000175222 88 ntBASIC15.44■□□□□ 0.06
Trav15-2-dv6-2A0A075B650 Gm46212-201ENSMUST00000220256 1003 ntTSL 5 BASIC15.44■□□□□ 0.06
Trav15-2-dv6-2A0A075B650 Dtymk-201ENSMUST00000027503 1003 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
Trav15-2-dv6-2A0A075B650 Camk2n2-201ENSMUST00000052939 1291 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
Trav15-2-dv6-2A0A075B650 Pqlc1-207ENSMUST00000140594 2356 ntAPPRIS P3 TSL 1 (best) BASIC15.44■□□□□ 0.06
Trav15-2-dv6-2A0A075B650 Fbxw5-201ENSMUST00000015239 2388 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
Trav15-2-dv6-2A0A075B650 Nudt11-201ENSMUST00000103007 3036 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
Trav15-2-dv6-2A0A075B650 Nr4a1-201ENSMUST00000023779 2474 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
Trav15-2-dv6-2A0A075B650 Ntn1-201ENSMUST00000021284 5738 ntAPPRIS P1 TSL 5 BASIC15.44■□□□□ 0.06
Trav15-2-dv6-2A0A075B650 Vat1-201ENSMUST00000040430 2766 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
Trav15-2-dv6-2A0A075B650 Zfp618-201ENSMUST00000030043 1582 ntTSL 1 (best) BASIC15.44■□□□□ 0.06
Trav15-2-dv6-2A0A075B650 Ncor1-203ENSMUST00000069456 3171 ntTSL 1 (best) BASIC15.44■□□□□ 0.06
Trav15-2-dv6-2A0A075B650 Gp5-201ENSMUST00000061190 2196 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
Trav15-2-dv6-2A0A075B650 Snrnp70-201ENSMUST00000074575 1735 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
Trav15-2-dv6-2A0A075B650 Tmem39b-201ENSMUST00000102588 1810 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
Trav15-2-dv6-2A0A075B650 Cdca4-201ENSMUST00000062092 2425 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
Trav15-2-dv6-2A0A075B650 Man1c1-201ENSMUST00000038628 4285 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
Trav15-2-dv6-2A0A075B650 Ssc4d-203ENSMUST00000111152 2745 ntAPPRIS P1 TSL 5 BASIC15.43■□□□□ 0.06
Trav15-2-dv6-2A0A075B650 Gm14486-201ENSMUST00000144704 644 ntTSL 3 BASIC15.43■□□□□ 0.06
Trav15-2-dv6-2A0A075B650 Rnf187-202ENSMUST00000217262 711 ntAPPRIS P2 TSL 1 (best) BASIC15.43■□□□□ 0.06
Trav15-2-dv6-2A0A075B650 1110004F10Rik-201ENSMUST00000032899 1479 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
Trav15-2-dv6-2A0A075B650 Nptxr-201ENSMUST00000023057 5004 ntAPPRIS ALT2 TSL 1 (best) BASIC15.43■□□□□ 0.06
Trav15-2-dv6-2A0A075B650 Fbxo7-202ENSMUST00000117597 1799 ntAPPRIS ALT2 TSL 1 (best) BASIC15.43■□□□□ 0.06
Trav15-2-dv6-2A0A075B650 Them6-201ENSMUST00000070923 1784 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
Trav15-2-dv6-2A0A075B650 Rbm24-201ENSMUST00000037923 3086 ntAPPRIS P1 TSL 2 BASIC15.43■□□□□ 0.06
Trav15-2-dv6-2A0A075B650 Larp1-201ENSMUST00000071487 6614 ntAPPRIS ALT2 TSL 5 BASIC15.43■□□□□ 0.06
Trav15-2-dv6-2A0A075B650 Ttc34-203ENSMUST00000207854 4733 ntAPPRIS ALT2 TSL 5 BASIC15.43■□□□□ 0.06
Trav15-2-dv6-2A0A075B650 Galnt1-206ENSMUST00000170243 4108 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
Trav15-2-dv6-2A0A075B650 Dolk-201ENSMUST00000100219 2104 ntAPPRIS P1 BASIC15.43■□□□□ 0.06
Trav15-2-dv6-2A0A075B650 Gm5540-201ENSMUST00000131852 1848 ntBASIC15.43■□□□□ 0.06
Trav15-2-dv6-2A0A075B650 Dlgap2-209ENSMUST00000152652 3842 ntAPPRIS P4 TSL 1 (best) BASIC15.42■□□□□ 0.06
Trav15-2-dv6-2A0A075B650 Cyp4f15-204ENSMUST00000168171 2168 ntAPPRIS P3 TSL 1 (best) BASIC15.42■□□□□ 0.06
Trav15-2-dv6-2A0A075B650 Sorcs2-201ENSMUST00000037370 5707 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
Trav15-2-dv6-2A0A075B650 Anp32e-210ENSMUST00000171368 878 ntTSL 3 BASIC15.42■□□□□ 0.06
Trav15-2-dv6-2A0A075B650 A730098A19Rik-201ENSMUST00000188193 978 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
Trav15-2-dv6-2A0A075B650 Mapkapk3-208ENSMUST00000192054 944 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
Trav15-2-dv6-2A0A075B650 Sec24d-208ENSMUST00000200333 307 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
Trav15-2-dv6-2A0A075B650 Gpr162-204ENSMUST00000204667 2855 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
Trav15-2-dv6-2A0A075B650 Alyref-201ENSMUST00000026125 3527 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
Trav15-2-dv6-2A0A075B650 Maff-201ENSMUST00000096350 1933 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
Trav15-2-dv6-2A0A075B650 Col4a3bp-202ENSMUST00000109444 5285 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
Trav15-2-dv6-2A0A075B650 Lats2-201ENSMUST00000022531 5191 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
Trav15-2-dv6-2A0A075B650 Foxo3-202ENSMUST00000105501 1316 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
Trav15-2-dv6-2A0A075B650 Ago4-201ENSMUST00000084289 6537 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
Trav15-2-dv6-2A0A075B650 Herpud2-201ENSMUST00000008573 2781 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Trav15-2-dv6-2A0A075B650 Dlg1-205ENSMUST00000115201 3248 ntTSL 5 BASIC15.41■□□□□ 0.06
Trav15-2-dv6-2A0A075B650 Klf16-201ENSMUST00000038558 2674 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Trav15-2-dv6-2A0A075B650 Ntn5-201ENSMUST00000107742 1574 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
Trav15-2-dv6-2A0A075B650 Lrrc43-201ENSMUST00000094327 2046 ntAPPRIS P3 TSL 1 (best) BASIC15.41■□□□□ 0.06
Trav15-2-dv6-2A0A075B650 Gm26694-201ENSMUST00000180868 1902 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
Trav15-2-dv6-2A0A075B650 Ero1l-201ENSMUST00000022378 4418 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Trav15-2-dv6-2A0A075B650 Trim58-201ENSMUST00000075084 2192 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Trav15-2-dv6-2A0A075B650 Nkiras2-203ENSMUST00000107376 1727 ntAPPRIS P1 TSL 5 BASIC15.41■□□□□ 0.06
Trav15-2-dv6-2A0A075B650 Hotairm1-201ENSMUST00000129546 409 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
Trav15-2-dv6-2A0A075B650 Ly6h-206ENSMUST00000156032 752 ntAPPRIS P3 TSL 3 BASIC15.41■□□□□ 0.06
Trav15-2-dv6-2A0A075B650 Tor3a-208ENSMUST00000190607 453 ntTSL 3 BASIC15.41■□□□□ 0.06
Trav15-2-dv6-2A0A075B650 Ly6h-201ENSMUST00000023241 906 ntAPPRIS ALT1 TSL 2 BASIC15.41■□□□□ 0.06
Trav15-2-dv6-2A0A075B650 Med14-201ENSMUST00000076016 2561 ntAPPRIS ALT2 TSL 1 (best) BASIC15.41■□□□□ 0.06
Trav15-2-dv6-2A0A075B650 Epn1-202ENSMUST00000098845 2565 ntAPPRIS P2 TSL 1 (best) BASIC15.41■□□□□ 0.06
Trav15-2-dv6-2A0A075B650 Gm42939-201ENSMUST00000197514 2205 ntBASIC15.41■□□□□ 0.06
Trav15-2-dv6-2A0A075B650 Lrch3-208ENSMUST00000165616 1875 ntTSL 5 BASIC15.41■□□□□ 0.06
Trav15-2-dv6-2A0A075B650 Gm11532-201ENSMUST00000128111 5272 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
Trav15-2-dv6-2A0A075B650 Rimklb-201ENSMUST00000068242 4725 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Trav15-2-dv6-2A0A075B650 Gls-204ENSMUST00000114513 4966 ntAPPRIS P3 TSL 5 BASIC15.41■□□□□ 0.06
Trav15-2-dv6-2A0A075B650 Faxc-201ENSMUST00000029908 2627 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Trav15-2-dv6-2A0A075B650 March11-202ENSMUST00000140840 1558 ntAPPRIS P3 TSL 2 BASIC15.41■□□□□ 0.06
Trav15-2-dv6-2A0A075B650 Smarca4-201ENSMUST00000034707 6354 ntAPPRIS P3 TSL 1 (best) BASIC15.4■□□□□ 0.06
Trav15-2-dv6-2A0A075B650 Mxi1-201ENSMUST00000003870 5156 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
Trav15-2-dv6-2A0A075B650 Ddx41-201ENSMUST00000021956 2205 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Trav15-2-dv6-2A0A075B650 Schip1-201ENSMUST00000029346 2201 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
Trav15-2-dv6-2A0A075B650 Dcun1d1-201ENSMUST00000108182 4980 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Trav15-2-dv6-2A0A075B650 Ppp1r3g-203ENSMUST00000225537 2389 ntAPPRIS P1 BASIC15.4■□□□□ 0.06
Trav15-2-dv6-2A0A075B650 Foxj1-201ENSMUST00000036215 2623 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Trav15-2-dv6-2A0A075B650 Impdh2-201ENSMUST00000081111 1858 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Trav15-2-dv6-2A0A075B650 Gm15853-202ENSMUST00000195518 2041 ntBASIC15.4■□□□□ 0.06
Trav15-2-dv6-2A0A075B650 Fam53a-202ENSMUST00000065119 2009 ntAPPRIS P2 TSL 1 (best) BASIC15.4■□□□□ 0.06
Trav15-2-dv6-2A0A075B650 Pxdc1-202ENSMUST00000053459 2684 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Trav15-2-dv6-2A0A075B650 Tmem59-202ENSMUST00000106753 1148 ntTSL 5 BASIC15.4■□□□□ 0.06
Trav15-2-dv6-2A0A075B650 2310061I04Rik-203ENSMUST00000148482 1193 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
Trav15-2-dv6-2A0A075B650 Fkbp1b-201ENSMUST00000020964 976 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Trav15-2-dv6-2A0A075B650 Gltpd2-201ENSMUST00000057685 1216 ntAPPRIS P2 TSL 1 (best) BASIC15.4■□□□□ 0.06
Trav15-2-dv6-2A0A075B650 Adgra2-201ENSMUST00000033876 5760 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Trav15-2-dv6-2A0A075B650 Tial1-201ENSMUST00000033135 1580 ntAPPRIS ALT1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Trav15-2-dv6-2A0A075B650 Slc10a4-201ENSMUST00000031127 2106 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Trav15-2-dv6-2A0A075B650 Crocc-211ENSMUST00000168157 6244 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
Trav15-2-dv6-2A0A075B650 Adam22-205ENSMUST00000115385 2318 ntTSL 2 BASIC15.39■□□□□ 0.05
Trav15-2-dv6-2A0A075B650 Tlcd1-202ENSMUST00000098545 2897 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
Trav15-2-dv6-2A0A075B650 Dlgap2-203ENSMUST00000133298 4503 ntAPPRIS ALT2 TSL 1 (best) BASIC15.39■□□□□ 0.05
Trav15-2-dv6-2A0A075B650 Smarcc1-207ENSMUST00000199896 5773 ntAPPRIS ALT2 TSL 1 (best) BASIC15.39■□□□□ 0.05
Trav15-2-dv6-2A0A075B650 Adpgk-205ENSMUST00000217570 2484 ntAPPRIS P2 TSL 1 (best) BASIC15.39■□□□□ 0.05
Trav15-2-dv6-2A0A075B650 Eif3j2-201ENSMUST00000057110 2379 ntAPPRIS P1 BASIC15.39■□□□□ 0.05
Trav15-2-dv6-2A0A075B650 Pwwp2b-201ENSMUST00000093993 3057 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
Trav15-2-dv6-2A0A075B650 Kcnma1-215ENSMUST00000190339 890 ntTSL 5 BASIC15.39■□□□□ 0.05
Trav15-2-dv6-2A0A075B650 Sec61a2-201ENSMUST00000026926 756 ntTSL 5 BASIC15.39■□□□□ 0.05
Trav15-2-dv6-2A0A075B650 8430432A02Rik-201ENSMUST00000039080 1248 ntBASIC15.39■□□□□ 0.05
Trav15-2-dv6-2A0A075B650 Ubtf-204ENSMUST00000107117 3258 ntAPPRIS ALT2 TSL 5 BASIC15.39■□□□□ 0.05
Trav15-2-dv6-2A0A075B650 Lrch2-201ENSMUST00000112819 4892 ntAPPRIS P1 TSL 5 BASIC15.39■□□□□ 0.05
Trav15-2-dv6-2A0A075B650 Ica1-203ENSMUST00000115519 1706 ntAPPRIS ALT2 TSL 5 BASIC15.39■□□□□ 0.05
Trav15-2-dv6-2A0A075B650 Mpg-201ENSMUST00000020528 1737 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Retrieved 100 of 76,532 protein–RNA pairs in 19.6 ms