Protein–RNA interactions for Protein: A0A075B633

Trav8n-2, T cell receptor alpha variable 8n-2 (Fragment), mousemouse

Predictions only

Length 112 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav8n-2A0A075B633 Sqstm1-202ENSMUST00000102774 2037 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Trav8n-2A0A075B633 Socs2-201ENSMUST00000020215 2222 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Trav8n-2A0A075B633 Gm13647-201ENSMUST00000154654 622 ntTSL 5 BASIC17.35■□□□□ 0.37
Trav8n-2A0A075B633 Creb1-207ENSMUST00000187811 1255 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
Trav8n-2A0A075B633 Clybl-201ENSMUST00000026625 1231 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Trav8n-2A0A075B633 Tsc22d1-214ENSMUST00000177207 1476 ntTSL 3 BASIC17.35■□□□□ 0.37
Trav8n-2A0A075B633 Nkd1-203ENSMUST00000211113 1474 ntTSL 5 BASIC17.35■□□□□ 0.37
Trav8n-2A0A075B633 Ppm1m-203ENSMUST00000140761 1846 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Trav8n-2A0A075B633 Syt17-203ENSMUST00000203485 1932 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
Trav8n-2A0A075B633 Qpct-201ENSMUST00000040789 1924 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Trav8n-2A0A075B633 Dnajb11-201ENSMUST00000004574 1927 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Trav8n-2A0A075B633 Dmwd-202ENSMUST00000108479 2388 ntAPPRIS ALT2 TSL 5 BASIC17.35■□□□□ 0.37
Trav8n-2A0A075B633 Gpr137c-207ENSMUST00000227086 4997 ntAPPRIS ALT2 BASIC17.34■□□□□ 0.37
Trav8n-2A0A075B633 Mpzl1-202ENSMUST00000111435 2285 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Trav8n-2A0A075B633 Speg-203ENSMUST00000113588 1078 ntTSL 5 BASIC17.34■□□□□ 0.37
Trav8n-2A0A075B633 Rnaset2b-202ENSMUST00000179728 2448 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Trav8n-2A0A075B633 Smarcd3-208ENSMUST00000195943 1712 ntTSL 5 BASIC17.34■□□□□ 0.37
Trav8n-2A0A075B633 Ccdc149-202ENSMUST00000198008 2470 ntTSL 5 BASIC17.34■□□□□ 0.37
Trav8n-2A0A075B633 Tpgs1-201ENSMUST00000020552 1143 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Trav8n-2A0A075B633 AC154649.1-201ENSMUST00000227392 384 ntBASIC17.34■□□□□ 0.37
Trav8n-2A0A075B633 Smarcd3-201ENSMUST00000030791 1735 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Trav8n-2A0A075B633 Mxi1-202ENSMUST00000025998 4996 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Trav8n-2A0A075B633 Ctdsp1-201ENSMUST00000027367 2876 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Trav8n-2A0A075B633 Aplp1-201ENSMUST00000006828 2343 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
Trav8n-2A0A075B633 Ankrd33b-203ENSMUST00000110410 2070 ntAPPRIS P3 TSL 1 (best) BASIC17.33■□□□□ 0.37
Trav8n-2A0A075B633 Faap24-201ENSMUST00000032704 1857 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
Trav8n-2A0A075B633 Ubac1-201ENSMUST00000036509 1852 ntAPPRIS P2 TSL 1 (best) BASIC17.33■□□□□ 0.37
Trav8n-2A0A075B633 Mboat4-201ENSMUST00000095345 1836 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
Trav8n-2A0A075B633 A630072M18Rik-201ENSMUST00000190567 5410 ntBASIC17.33■□□□□ 0.36
Trav8n-2A0A075B633 Larp4b-204ENSMUST00000188939 2658 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
Trav8n-2A0A075B633 Arid3c-202ENSMUST00000150809 1327 ntAPPRIS ALT2 TSL 1 (best) BASIC17.33■□□□□ 0.36
Trav8n-2A0A075B633 Dedd-204ENSMUST00000111300 2563 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Trav8n-2A0A075B633 Gm13836-201ENSMUST00000121159 501 ntBASIC17.33■□□□□ 0.36
Trav8n-2A0A075B633 Creb1-203ENSMUST00000171164 1287 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
Trav8n-2A0A075B633 Gm7977-201ENSMUST00000193787 748 ntBASIC17.33■□□□□ 0.36
Trav8n-2A0A075B633 Fgf8-202ENSMUST00000026241 1168 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
Trav8n-2A0A075B633 Bpifb4-202ENSMUST00000109757 2420 ntAPPRIS P2 TSL 5 BASIC17.33■□□□□ 0.36
Trav8n-2A0A075B633 Kcnj12-202ENSMUST00000089184 2291 ntAPPRIS P3 TSL 1 (best) BASIC17.33■□□□□ 0.36
Trav8n-2A0A075B633 Prdm13-202ENSMUST00000095141 3173 ntAPPRIS P2 TSL 2 BASIC17.33■□□□□ 0.36
Trav8n-2A0A075B633 Dap3-201ENSMUST00000090938 4760 ntAPPRIS P2 TSL 1 (best) BASIC17.33■□□□□ 0.36
Trav8n-2A0A075B633 Nrxn2-205ENSMUST00000113462 6667 ntAPPRIS P4 TSL 1 (best) BASIC17.33■□□□□ 0.36
Trav8n-2A0A075B633 Stx18-201ENSMUST00000031008 1471 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
Trav8n-2A0A075B633 Pank2-204ENSMUST00000150843 4266 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Trav8n-2A0A075B633 Psmd3-201ENSMUST00000017365 2148 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Trav8n-2A0A075B633 Cpeb3-205ENSMUST00000126781 2095 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
Trav8n-2A0A075B633 Smpdl3a-201ENSMUST00000020022 1961 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Trav8n-2A0A075B633 Rpl36al-202ENSMUST00000110619 1276 ntAPPRIS P1 BASIC17.32■□□□□ 0.36
Trav8n-2A0A075B633 Pigp-203ENSMUST00000113910 966 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
Trav8n-2A0A075B633 Gm11527-201ENSMUST00000153795 596 ntTSL 2 BASIC17.32■□□□□ 0.36
Trav8n-2A0A075B633 Insig2-203ENSMUST00000159085 1252 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Trav8n-2A0A075B633 Ube2d-ps-204ENSMUST00000137510 1846 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
Trav8n-2A0A075B633 Actr5-201ENSMUST00000045644 2402 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Trav8n-2A0A075B633 Matk-204ENSMUST00000120265 1618 ntAPPRIS ALT2 TSL 5 BASIC17.32■□□□□ 0.36
Trav8n-2A0A075B633 Nrxn1-213ENSMUST00000172466 2477 ntTSL 5 BASIC17.31■□□□□ 0.36
Trav8n-2A0A075B633 Rapgef1-203ENSMUST00000102872 6402 ntAPPRIS P3 TSL 1 (best) BASIC17.31■□□□□ 0.36
Trav8n-2A0A075B633 Gnl1-201ENSMUST00000087200 2848 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Trav8n-2A0A075B633 Gm13830-204ENSMUST00000149609 1851 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
Trav8n-2A0A075B633 Csrp2-201ENSMUST00000020403 1384 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Trav8n-2A0A075B633 Mprip-201ENSMUST00000066330 7765 ntAPPRIS ALT2 TSL 5 BASIC17.31■□□□□ 0.36
Trav8n-2A0A075B633 Hmga1-202ENSMUST00000117254 1328 ntAPPRIS P3 TSL 2 BASIC17.31■□□□□ 0.36
Trav8n-2A0A075B633 Olig1-201ENSMUST00000056882 2162 ntAPPRIS P1 BASIC17.31■□□□□ 0.36
Trav8n-2A0A075B633 Nrarp-201ENSMUST00000104999 2582 ntAPPRIS P1 BASIC17.31■□□□□ 0.36
Trav8n-2A0A075B633 Gm1673-203ENSMUST00000114383 511 ntAPPRIS ALT2 TSL 1 (best) BASIC17.31■□□□□ 0.36
Trav8n-2A0A075B633 Unc50-203ENSMUST00000118059 1179 ntAPPRIS P1 TSL 5 BASIC17.31■□□□□ 0.36
Trav8n-2A0A075B633 Josd2-205ENSMUST00000120852 727 ntAPPRIS P1 TSL 3 BASIC17.31■□□□□ 0.36
Trav8n-2A0A075B633 Gm20390-201ENSMUST00000170303 991 ntAPPRIS P1 TSL 5 BASIC17.31■□□□□ 0.36
Trav8n-2A0A075B633 Atp5c1-201ENSMUST00000026887 1060 ntAPPRIS ALT1 TSL 5 BASIC17.31■□□□□ 0.36
Trav8n-2A0A075B633 Fxn-201ENSMUST00000081333 1114 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Trav8n-2A0A075B633 Vgll2-202ENSMUST00000163017 1650 ntAPPRIS P3 TSL 1 (best) BASIC17.31■□□□□ 0.36
Trav8n-2A0A075B633 Dhx33-204ENSMUST00000124464 1835 ntTSL 5 BASIC17.31■□□□□ 0.36
Trav8n-2A0A075B633 Nsfl1c-203ENSMUST00000103160 1369 ntTSL 5 BASIC17.3■□□□□ 0.36
Trav8n-2A0A075B633 Cbx6-203ENSMUST00000109627 5806 ntAPPRIS P2 TSL 1 (best) BASIC17.3■□□□□ 0.36
Trav8n-2A0A075B633 Gm32699-201ENSMUST00000221728 1988 ntBASIC17.3■□□□□ 0.36
Trav8n-2A0A075B633 Mrps12-201ENSMUST00000056078 722 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Trav8n-2A0A075B633 AC165249.1-201ENSMUST00000220031 1599 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
Trav8n-2A0A075B633 Nrn1-203ENSMUST00000223611 1443 ntBASIC17.3■□□□□ 0.36
Trav8n-2A0A075B633 Uqcrc1-201ENSMUST00000026743 1653 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Trav8n-2A0A075B633 Prr22-201ENSMUST00000168666 1350 ntAPPRIS P1 TSL 3 BASIC17.29■□□□□ 0.36
Trav8n-2A0A075B633 Zfp697-201ENSMUST00000056096 5166 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Trav8n-2A0A075B633 Klhl15-205ENSMUST00000113916 2363 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Trav8n-2A0A075B633 Sorcs2-201ENSMUST00000037370 5707 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Trav8n-2A0A075B633 Gm11249-201ENSMUST00000117071 859 ntBASIC17.29■□□□□ 0.36
Trav8n-2A0A075B633 Tnfaip8l2-201ENSMUST00000013851 1122 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Trav8n-2A0A075B633 Gm11713-201ENSMUST00000139941 523 ntTSL 3 BASIC17.29■□□□□ 0.36
Trav8n-2A0A075B633 Dleu2-210ENSMUST00000183054 722 ntTSL 5 BASIC17.29■□□□□ 0.36
Trav8n-2A0A075B633 Smim10l1-204ENSMUST00000191462 574 ntTSL 3 BASIC17.29■□□□□ 0.36
Trav8n-2A0A075B633 Cmc1-202ENSMUST00000215799 531 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
Trav8n-2A0A075B633 Atoh8-201ENSMUST00000042646 2355 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Trav8n-2A0A075B633 Ints6-201ENSMUST00000053959 4993 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Trav8n-2A0A075B633 Gtpbp2-217ENSMUST00000172170 2587 ntTSL 5 BASIC17.29■□□□□ 0.36
Trav8n-2A0A075B633 Ptpn12-201ENSMUST00000030556 3280 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Trav8n-2A0A075B633 Dusp22-203ENSMUST00000110310 2319 ntTSL 2 BASIC17.29■□□□□ 0.36
Trav8n-2A0A075B633 Cacnb3-202ENSMUST00000109150 2670 ntTSL 5 BASIC17.28■□□□□ 0.36
Trav8n-2A0A075B633 Crlf3-203ENSMUST00000103233 2230 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
Trav8n-2A0A075B633 Itsn2-201ENSMUST00000062580 5987 ntAPPRIS P2 TSL 5 BASIC17.28■□□□□ 0.36
Trav8n-2A0A075B633 Tbxa2r-202ENSMUST00000220312 1919 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Trav8n-2A0A075B633 Cenps-202ENSMUST00000105695 544 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
Trav8n-2A0A075B633 Gm15378-201ENSMUST00000121894 207 ntBASIC17.28■□□□□ 0.36
Trav8n-2A0A075B633 Gm19426-201ENSMUST00000181711 726 ntAPPRIS P1 TSL 2 BASIC17.28■□□□□ 0.36
Trav8n-2A0A075B633 9130019P16Rik-203ENSMUST00000185712 650 ntTSL 5 BASIC17.28■□□□□ 0.36
Retrieved 100 of 76,532 protein–RNA pairs in 23.1 ms