Protein–RNA interactions for Protein: A0A075B606

Trav13d-1, T cell receptor alpha variable 13D-1 (Fragment), mousemouse

Predictions only

Length 110 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav13d-1A0A075B606 Gon7-202ENSMUST00000179263 525 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
Trav13d-1A0A075B606 A730056A06Rik-202ENSMUST00000206959 526 ntTSL 3 BASIC13.83□□□□□ -0.2
Trav13d-1A0A075B606 Vkorc1l1-202ENSMUST00000073945 650 ntTSL 2 BASIC13.83□□□□□ -0.2
Trav13d-1A0A075B606 Anapc5-208ENSMUST00000197719 2383 ntAPPRIS ALT2 TSL 1 (best) BASIC13.83□□□□□ -0.2
Trav13d-1A0A075B606 Olfr94-201ENSMUST00000055324 1304 ntAPPRIS P2 BASIC13.83□□□□□ -0.2
Trav13d-1A0A075B606 Man2a2-201ENSMUST00000098346 6554 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Trav13d-1A0A075B606 Trim67-201ENSMUST00000041106 5694 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Trav13d-1A0A075B606 Gm45015-201ENSMUST00000207943 1364 ntAPPRIS P1 TSL 5 BASIC13.83□□□□□ -0.2
Trav13d-1A0A075B606 5730507C01Rik-202ENSMUST00000177778 2542 ntAPPRIS ALT2 TSL 1 (best) BASIC13.83□□□□□ -0.2
Trav13d-1A0A075B606 Pelo-201ENSMUST00000109226 1600 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Trav13d-1A0A075B606 Acvrl1-202ENSMUST00000117984 1852 ntAPPRIS P1 TSL 5 BASIC13.82□□□□□ -0.2
Trav13d-1A0A075B606 Rasef-203ENSMUST00000222414 2127 ntAPPRIS P1 TSL 5 BASIC13.82□□□□□ -0.2
Trav13d-1A0A075B606 Mprip-203ENSMUST00000108751 4021 ntAPPRIS ALT2 TSL 1 (best) BASIC13.82□□□□□ -0.2
Trav13d-1A0A075B606 Bmp6-201ENSMUST00000171970 3593 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Trav13d-1A0A075B606 Pdzd3-201ENSMUST00000034618 2193 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Trav13d-1A0A075B606 Samd10-201ENSMUST00000060173 2164 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Trav13d-1A0A075B606 Matr3-209ENSMUST00000188275 1951 ntTSL 5 BASIC13.82□□□□□ -0.2
Trav13d-1A0A075B606 Cacnb1-203ENSMUST00000103144 2236 ntTSL 5 BASIC13.82□□□□□ -0.2
Trav13d-1A0A075B606 Cacna1a-202ENSMUST00000122053 7589 ntAPPRIS ALT2 TSL 1 (best) BASIC13.82□□□□□ -0.2
Trav13d-1A0A075B606 Uckl1os-201ENSMUST00000122831 2018 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
Trav13d-1A0A075B606 Adamtsl5-202ENSMUST00000105352 989 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
Trav13d-1A0A075B606 Mrpl52-201ENSMUST00000010550 418 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Trav13d-1A0A075B606 Fam241b-209ENSMUST00000142821 1283 ntAPPRIS P1 TSL 5 BASIC13.82□□□□□ -0.2
Trav13d-1A0A075B606 Prmt1-210ENSMUST00000208829 621 ntTSL 5 BASIC13.82□□□□□ -0.2
Trav13d-1A0A075B606 Jkamp-201ENSMUST00000057257 1292 ntAPPRIS P3 TSL 1 (best) BASIC13.82□□□□□ -0.2
Trav13d-1A0A075B606 Cox7c-202ENSMUST00000078764 433 ntTSL 2 BASIC13.82□□□□□ -0.2
Trav13d-1A0A075B606 Gatad2a-202ENSMUST00000116463 3363 ntAPPRIS ALT2 TSL 1 (best) BASIC13.82□□□□□ -0.2
Trav13d-1A0A075B606 Klhl15-205ENSMUST00000113916 2363 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Trav13d-1A0A075B606 Mrpl12-201ENSMUST00000043627 1316 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Trav13d-1A0A075B606 Hnrnpl-211ENSMUST00000174548 2679 ntAPPRIS P1 TSL 5 BASIC13.82□□□□□ -0.2
Trav13d-1A0A075B606 Gm38399-201ENSMUST00000112103 1645 ntTSL 2 BASIC13.82□□□□□ -0.2
Trav13d-1A0A075B606 Gramd1a-201ENSMUST00000001280 2713 ntAPPRIS P2 TSL 1 (best) BASIC13.82□□□□□ -0.2
Trav13d-1A0A075B606 Pou2f2-210ENSMUST00000176408 1697 ntTSL 5 BASIC13.82□□□□□ -0.2
Trav13d-1A0A075B606 Qrich1-206ENSMUST00000193258 2291 ntTSL 2 BASIC13.81□□□□□ -0.2
Trav13d-1A0A075B606 Siglecf-206ENSMUST00000206299 2149 ntAPPRIS ALT2 TSL 1 (best) BASIC13.81□□□□□ -0.2
Trav13d-1A0A075B606 Ankle2-202ENSMUST00000086674 5025 ntAPPRIS ALT2 TSL 5 BASIC13.81□□□□□ -0.2
Trav13d-1A0A075B606 Zfp467-201ENSMUST00000101443 599 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
Trav13d-1A0A075B606 Gnai2-203ENSMUST00000192837 421 ntTSL 5 BASIC13.81□□□□□ -0.2
Trav13d-1A0A075B606 Stx6-209ENSMUST00000195302 955 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
Trav13d-1A0A075B606 Msantd1-203ENSMUST00000202205 744 ntTSL 2 BASIC13.81□□□□□ -0.2
Trav13d-1A0A075B606 D830036C21Rik-201ENSMUST00000207444 453 ntTSL 3 BASIC13.81□□□□□ -0.2
Trav13d-1A0A075B606 AC154266.1-201ENSMUST00000223190 503 ntBASIC13.81□□□□□ -0.2
Trav13d-1A0A075B606 Atp11a-202ENSMUST00000091237 7443 ntAPPRIS P3 TSL 1 (best) BASIC13.81□□□□□ -0.2
Trav13d-1A0A075B606 Trak1-209ENSMUST00000210798 5363 ntAPPRIS ALT2 TSL 1 (best) BASIC13.81□□□□□ -0.2
Trav13d-1A0A075B606 Arl4c-203ENSMUST00000187810 2740 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Trav13d-1A0A075B606 Rab7-205ENSMUST00000113600 2159 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Trav13d-1A0A075B606 Rcl1-201ENSMUST00000064393 1803 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Trav13d-1A0A075B606 Gfi1-203ENSMUST00000159164 2648 ntAPPRIS P3 TSL 1 (best) BASIC13.8□□□□□ -0.2
Trav13d-1A0A075B606 2410004B18Rik-201ENSMUST00000039571 1547 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Trav13d-1A0A075B606 Zmym3-202ENSMUST00000117637 1593 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
Trav13d-1A0A075B606 Foxf2-201ENSMUST00000042054 2363 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Trav13d-1A0A075B606 Cdk19-201ENSMUST00000044672 5807 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Trav13d-1A0A075B606 Gm8773-201ENSMUST00000101627 1268 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Trav13d-1A0A075B606 Sarnp-201ENSMUST00000105230 918 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Trav13d-1A0A075B606 AC121965.1-201ENSMUST00000221422 861 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
Trav13d-1A0A075B606 Prpf19-201ENSMUST00000025642 2134 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Trav13d-1A0A075B606 Lsm2-201ENSMUST00000007266 873 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
Trav13d-1A0A075B606 Gm10306-201ENSMUST00000094969 533 ntAPPRIS P1 BASIC13.8□□□□□ -0.2
Trav13d-1A0A075B606 Arhgef1-204ENSMUST00000117796 3508 ntAPPRIS ALT2 TSL 1 (best) BASIC13.8□□□□□ -0.2
Trav13d-1A0A075B606 Ak2-202ENSMUST00000102604 1781 ntAPPRIS ALT1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Trav13d-1A0A075B606 E2f1-202ENSMUST00000103145 2732 ntAPPRIS P3 TSL 1 (best) BASIC13.8□□□□□ -0.2
Trav13d-1A0A075B606 A930001C03Rik-204ENSMUST00000154407 1402 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
Trav13d-1A0A075B606 Smap2-201ENSMUST00000043200 2905 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Trav13d-1A0A075B606 Tmem230-206ENSMUST00000180286 1531 ntAPPRIS P1 TSL 2 BASIC13.8□□□□□ -0.2
Trav13d-1A0A075B606 Rnf169-201ENSMUST00000080817 7147 ntAPPRIS P1 TSL 5 BASIC13.79□□□□□ -0.2
Trav13d-1A0A075B606 Wdr41-202ENSMUST00000159647 2289 ntTSL 5 BASIC13.79□□□□□ -0.2
Trav13d-1A0A075B606 Wdr41-206ENSMUST00000167155 2289 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
Trav13d-1A0A075B606 Pbx1-202ENSMUST00000072863 1709 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
Trav13d-1A0A075B606 Stx2-201ENSMUST00000031378 2939 ntAPPRIS P3 TSL 1 (best) BASIC13.79□□□□□ -0.2
Trav13d-1A0A075B606 Arfrp1-203ENSMUST00000127988 2447 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Trav13d-1A0A075B606 Mgat4b-201ENSMUST00000041725 2429 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Trav13d-1A0A075B606 4930413G21Rik-201ENSMUST00000205998 993 ntBASIC13.79□□□□□ -0.2
Trav13d-1A0A075B606 Gm4881-201ENSMUST00000206705 1152 ntAPPRIS P1 TSL 5 BASIC13.79□□□□□ -0.2
Trav13d-1A0A075B606 Wasl-202ENSMUST00000041737 1298 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
Trav13d-1A0A075B606 Hist1h2ao-201ENSMUST00000091745 480 ntAPPRIS P1 BASIC13.79□□□□□ -0.2
Trav13d-1A0A075B606 Zfp771-201ENSMUST00000052509 1484 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Trav13d-1A0A075B606 Satb1-211ENSMUST00000152830 5993 ntAPPRIS P2 TSL 2 BASIC13.79□□□□□ -0.2
Trav13d-1A0A075B606 Tmem121-201ENSMUST00000058491 1574 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Trav13d-1A0A075B606 Dhx36-201ENSMUST00000029336 5620 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Trav13d-1A0A075B606 Wasf3-201ENSMUST00000016143 5196 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Trav13d-1A0A075B606 Pbx1-206ENSMUST00000176790 1828 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
Trav13d-1A0A075B606 1700123O20Rik-201ENSMUST00000038539 1843 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Trav13d-1A0A075B606 Cldn23-201ENSMUST00000060128 1848 ntAPPRIS P1 BASIC13.78□□□□□ -0.2
Trav13d-1A0A075B606 Kcnd3-202ENSMUST00000098761 7169 ntAPPRIS ALT1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Trav13d-1A0A075B606 Gjc2-201ENSMUST00000108790 2169 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Trav13d-1A0A075B606 Ralgps2-205ENSMUST00000185198 2229 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
Trav13d-1A0A075B606 Nudt19-201ENSMUST00000040962 2298 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Trav13d-1A0A075B606 Polr2j-202ENSMUST00000111127 900 ntTSL 2 BASIC13.78□□□□□ -0.2
Trav13d-1A0A075B606 Dpyd-204ENSMUST00000149101 531 ntTSL 3 BASIC13.78□□□□□ -0.2
Trav13d-1A0A075B606 Dlx6-203ENSMUST00000171311 1071 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Trav13d-1A0A075B606 Specc1-215ENSMUST00000202744 674 ntTSL 3 BASIC13.78□□□□□ -0.2
Trav13d-1A0A075B606 Mtmr9-201ENSMUST00000058679 2570 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Trav13d-1A0A075B606 AC122335.2-201ENSMUST00000213901 6181 ntBASIC13.78□□□□□ -0.2
Trav13d-1A0A075B606 Pdpk1-205ENSMUST00000115411 1724 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
Trav13d-1A0A075B606 Hpdl-201ENSMUST00000055436 1804 ntAPPRIS P1 BASIC13.78□□□□□ -0.2
Trav13d-1A0A075B606 Matn4-203ENSMUST00000109358 2056 ntTSL 5 BASIC13.78□□□□□ -0.2
Trav13d-1A0A075B606 Otud5-203ENSMUST00000115666 2471 ntAPPRIS ALT2 TSL 1 (best) BASIC13.78□□□□□ -0.2
Trav13d-1A0A075B606 Mxi1-201ENSMUST00000003870 5156 ntTSL 1 (best) BASIC13.77□□□□□ -0.2
Trav13d-1A0A075B606 Usp36-202ENSMUST00000106296 5655 ntAPPRIS P1 TSL 5 BASIC13.77□□□□□ -0.2
Trav13d-1A0A075B606 Ptgfrn-201ENSMUST00000102694 5902 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.2
Retrieved 100 of 76,532 protein–RNA pairs in 15 ms