Protein–RNA interactions for Protein: A0A075B601

Trav9-1, T cell receptor alpha variable 9-1 (Fragment), mousemouse

Predictions only

Length 112 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav9-1A0A075B601 C230037L18Rik-201ENSMUST00000136218 1886 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
Trav9-1A0A075B601 Pgs1-203ENSMUST00000132676 2863 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Trav9-1A0A075B601 Galnt14-202ENSMUST00000112591 1843 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
Trav9-1A0A075B601 Krt24-201ENSMUST00000017255 1847 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Trav9-1A0A075B601 Tmem185a-201ENSMUST00000101506 2429 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
Trav9-1A0A075B601 Disc1-204ENSMUST00000115885 2408 ntAPPRIS ALT2 TSL 5 BASIC14.73□□□□□ -0.05
Trav9-1A0A075B601 Disc1-202ENSMUST00000075730 2408 ntAPPRIS P3 TSL 5 BASIC14.73□□□□□ -0.05
Trav9-1A0A075B601 Faxc-201ENSMUST00000029908 2627 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Trav9-1A0A075B601 C2cd4a-201ENSMUST00000054500 1395 ntAPPRIS P1 TSL 5 BASIC14.73□□□□□ -0.05
Trav9-1A0A075B601 Cbln2-202ENSMUST00000122079 2549 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Trav9-1A0A075B601 Hdhd5-201ENSMUST00000075303 1928 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Trav9-1A0A075B601 Vrk1-202ENSMUST00000072040 1509 ntAPPRIS ALT2 TSL 1 (best) BASIC14.72□□□□□ -0.05
Trav9-1A0A075B601 Hmgxb3-201ENSMUST00000091884 5101 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Trav9-1A0A075B601 Cyb5r4-201ENSMUST00000168529 2644 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Trav9-1A0A075B601 Trmt61a-201ENSMUST00000084947 2433 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Trav9-1A0A075B601 Shisa7-203ENSMUST00000119433 3481 ntAPPRIS P2 TSL 1 (best) BASIC14.72□□□□□ -0.05
Trav9-1A0A075B601 Sh2b3-203ENSMUST00000118580 2393 ntAPPRIS ALT2 TSL 2 BASIC14.72□□□□□ -0.05
Trav9-1A0A075B601 2810001G20Rik-202ENSMUST00000146333 959 ntTSL 3 BASIC14.72□□□□□ -0.05
Trav9-1A0A075B601 Bsg-205ENSMUST00000179781 1261 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
Trav9-1A0A075B601 Gsc-201ENSMUST00000021513 1268 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Trav9-1A0A075B601 Rras-201ENSMUST00000044111 995 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Trav9-1A0A075B601 Gm3448-202ENSMUST00000097400 747 ntAPPRIS ALT2 TSL 5 BASIC14.72□□□□□ -0.05
Trav9-1A0A075B601 Matk-204ENSMUST00000120265 1618 ntAPPRIS ALT2 TSL 5 BASIC14.72□□□□□ -0.05
Trav9-1A0A075B601 Gm4779-203ENSMUST00000147742 1991 ntAPPRIS P1 TSL 5 BASIC14.72□□□□□ -0.05
Trav9-1A0A075B601 Ccdc3-201ENSMUST00000027988 2670 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Trav9-1A0A075B601 Socs6-203ENSMUST00000125362 2814 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Trav9-1A0A075B601 Gm43034-201ENSMUST00000198678 1364 ntBASIC14.72□□□□□ -0.05
Trav9-1A0A075B601 Mark2-203ENSMUST00000051711 2867 ntAPPRIS P4 TSL 1 (best) BASIC14.71□□□□□ -0.05
Trav9-1A0A075B601 Map7d2-203ENSMUST00000112471 3670 ntAPPRIS P3 TSL 5 BASIC14.71□□□□□ -0.05
Trav9-1A0A075B601 Erlin1-202ENSMUST00000112028 3136 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
Trav9-1A0A075B601 Hsdl1-201ENSMUST00000036049 3141 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
Trav9-1A0A075B601 Tmem245-202ENSMUST00000107609 2643 ntAPPRIS P2 TSL 5 BASIC14.71□□□□□ -0.05
Trav9-1A0A075B601 Nubp1-201ENSMUST00000023146 2121 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
Trav9-1A0A075B601 Rpap3-201ENSMUST00000023104 2260 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
Trav9-1A0A075B601 Smap2-201ENSMUST00000043200 2905 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
Trav9-1A0A075B601 Rragd-203ENSMUST00000098190 5008 ntAPPRIS P1 TSL 2 BASIC14.71□□□□□ -0.05
Trav9-1A0A075B601 Gm16192-201ENSMUST00000148357 937 ntTSL 1 (best) BASIC14.71□□□□□ -0.05
Trav9-1A0A075B601 Cdv3-ps-201ENSMUST00000169632 827 ntBASIC14.71□□□□□ -0.05
Trav9-1A0A075B601 Fbxl15-202ENSMUST00000177667 1243 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
Trav9-1A0A075B601 Dynlt1f-201ENSMUST00000179554 807 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
Trav9-1A0A075B601 Cox5b-204ENSMUST00000193210 865 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
Trav9-1A0A075B601 Rps7-203ENSMUST00000221871 820 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
Trav9-1A0A075B601 Proca1-201ENSMUST00000060539 960 ntAPPRIS ALT2 TSL 2 BASIC14.71□□□□□ -0.05
Trav9-1A0A075B601 Gm6627-201ENSMUST00000218299 2386 ntBASIC14.71□□□□□ -0.05
Trav9-1A0A075B601 Grk2-202ENSMUST00000088737 3376 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.06
Trav9-1A0A075B601 Kazald1-201ENSMUST00000026234 1380 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.06
Trav9-1A0A075B601 Sema3c-201ENSMUST00000030568 5491 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.06
Trav9-1A0A075B601 Tril-201ENSMUST00000127748 5363 ntAPPRIS P1 BASIC14.7□□□□□ -0.06
Trav9-1A0A075B601 Plin1-201ENSMUST00000032762 1916 ntAPPRIS P1 TSL 5 BASIC14.7□□□□□ -0.06
Trav9-1A0A075B601 Wdr37-203ENSMUST00000164183 1780 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
Trav9-1A0A075B601 Bag1-202ENSMUST00000108089 1336 ntAPPRIS ALT2 TSL 1 (best) BASIC14.7□□□□□ -0.06
Trav9-1A0A075B601 St7l-201ENSMUST00000059271 5728 ntAPPRIS P3 TSL 1 (best) BASIC14.7□□□□□ -0.06
Trav9-1A0A075B601 Zfpm1-201ENSMUST00000054052 3390 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Trav9-1A0A075B601 Zswim8-208ENSMUST00000224751 5951 ntAPPRIS ALT2 BASIC14.7□□□□□ -0.06
Trav9-1A0A075B601 Mchr1-201ENSMUST00000166855 2188 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Trav9-1A0A075B601 Ago4-201ENSMUST00000084289 6537 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Trav9-1A0A075B601 Jph1-201ENSMUST00000038382 4809 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Trav9-1A0A075B601 Gm10382-201ENSMUST00000100700 1233 ntAPPRIS P1 BASIC14.7□□□□□ -0.06
Trav9-1A0A075B601 9530036O11Rik-201ENSMUST00000180878 876 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
Trav9-1A0A075B601 2810474O19Rik-201ENSMUST00000046689 6066 ntAPPRIS P2 TSL 1 (best) BASIC14.7□□□□□ -0.06
Trav9-1A0A075B601 Ppp1r13b-201ENSMUST00000054815 4389 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Trav9-1A0A075B601 Dmwd-202ENSMUST00000108479 2388 ntAPPRIS ALT2 TSL 5 BASIC14.7□□□□□ -0.06
Trav9-1A0A075B601 Slc35f4-201ENSMUST00000074368 1931 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Trav9-1A0A075B601 Spsb4-201ENSMUST00000055433 2720 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Trav9-1A0A075B601 D030056L22Rik-201ENSMUST00000055792 1631 ntAPPRIS P2 TSL 1 (best) BASIC14.7□□□□□ -0.06
Trav9-1A0A075B601 Rfx7-201ENSMUST00000093820 7988 ntAPPRIS P1 TSL 5 BASIC14.7□□□□□ -0.06
Trav9-1A0A075B601 Ccser1-203ENSMUST00000126214 5657 ntAPPRIS P1 TSL 5 BASIC14.7□□□□□ -0.06
Trav9-1A0A075B601 Fam53a-202ENSMUST00000065119 2009 ntAPPRIS P2 TSL 1 (best) BASIC14.7□□□□□ -0.06
Trav9-1A0A075B601 Atrnl1-201ENSMUST00000077282 6581 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Trav9-1A0A075B601 Parl-201ENSMUST00000048642 1348 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Trav9-1A0A075B601 Cxxc1-201ENSMUST00000025444 2618 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Trav9-1A0A075B601 Pla2g12a-201ENSMUST00000029629 1561 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Trav9-1A0A075B601 Dnaja4-202ENSMUST00000120452 1827 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Trav9-1A0A075B601 Neil2-201ENSMUST00000038229 1932 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Trav9-1A0A075B601 Tarbp2-202ENSMUST00000100168 1278 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
Trav9-1A0A075B601 Epb41l4aos-201ENSMUST00000146010 430 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
Trav9-1A0A075B601 Mir7075-201ENSMUST00000184187 82 ntBASIC14.69□□□□□ -0.06
Trav9-1A0A075B601 Ank1-207ENSMUST00000118733 8201 ntAPPRIS ALT2 TSL 1 (best) BASIC14.69□□□□□ -0.06
Trav9-1A0A075B601 Atp9a-211ENSMUST00000178504 3668 ntAPPRIS P1 TSL 5 BASIC14.69□□□□□ -0.06
Trav9-1A0A075B601 Kcns3-201ENSMUST00000055673 2933 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Trav9-1A0A075B601 Klc3-203ENSMUST00000108458 1823 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
Trav9-1A0A075B601 Espn-210ENSMUST00000105656 1593 ntTSL 5 BASIC14.68□□□□□ -0.06
Trav9-1A0A075B601 D16Ertd472e-202ENSMUST00000114219 1576 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Trav9-1A0A075B601 Rimklb-201ENSMUST00000068242 4725 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Trav9-1A0A075B601 Gp5-201ENSMUST00000061190 2196 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Trav9-1A0A075B601 Mmadhc-201ENSMUST00000102769 1342 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Trav9-1A0A075B601 H19-202ENSMUST00000136359 2286 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
Trav9-1A0A075B601 Sae1-204ENSMUST00000211741 1663 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
Trav9-1A0A075B601 Plekhg3-201ENSMUST00000075249 5138 ntAPPRIS P2 TSL 1 (best) BASIC14.68□□□□□ -0.06
Trav9-1A0A075B601 Tmem234-201ENSMUST00000102591 1437 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Trav9-1A0A075B601 Pqlc1-207ENSMUST00000140594 2356 ntAPPRIS P3 TSL 1 (best) BASIC14.68□□□□□ -0.06
Trav9-1A0A075B601 Pwwp2b-201ENSMUST00000093993 3057 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
Trav9-1A0A075B601 Gm9885-202ENSMUST00000186234 2209 ntBASIC14.68□□□□□ -0.06
Trav9-1A0A075B601 Rchy1-201ENSMUST00000031345 1967 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Trav9-1A0A075B601 Gm11747-201ENSMUST00000142751 1648 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
Trav9-1A0A075B601 Srsf1-202ENSMUST00000107920 1209 ntTSL 5 BASIC14.68□□□□□ -0.06
Trav9-1A0A075B601 Gm12660-201ENSMUST00000123764 664 ntTSL 3 BASIC14.68□□□□□ -0.06
Trav9-1A0A075B601 4930519P11Rik-201ENSMUST00000181369 501 ntAPPRIS P1 BASIC14.68□□□□□ -0.06
Trav9-1A0A075B601 Prmt3-201ENSMUST00000032715 2507 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Trav9-1A0A075B601 Gm28523-201ENSMUST00000190040 1588 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
Retrieved 100 of 76,532 protein–RNA pairs in 400.2 ms