Protein–RNA interactions for Protein: A0A075B5I2

Trbv4, T cell receptor beta, variable 10 (Fragment), mousemouse

Predictions only

Length 113 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trbv4A0A075B5I2 Kmt2b-202ENSMUST00000108154 8454 ntAPPRIS P2 TSL 1 (best) BASIC19.01■□□□□ 0.63
Trbv4A0A075B5I2 Cdkl3-206ENSMUST00000109079 2051 ntAPPRIS ALT2 TSL 5 BASIC19.01■□□□□ 0.63
Trbv4A0A075B5I2 Cdkl3-208ENSMUST00000109081 2063 ntAPPRIS ALT2 TSL 5 BASIC19.01■□□□□ 0.63
Trbv4A0A075B5I2 Unc5b-201ENSMUST00000077925 5869 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Trbv4A0A075B5I2 Cant1-205ENSMUST00000106289 1600 ntTSL 1 (best) BASIC19■□□□□ 0.63
Trbv4A0A075B5I2 Shq1-201ENSMUST00000089245 1638 ntTSL 1 (best) BASIC19■□□□□ 0.63
Trbv4A0A075B5I2 Gm26694-201ENSMUST00000180868 1902 ntTSL 1 (best) BASIC19■□□□□ 0.63
Trbv4A0A075B5I2 Pianp-204ENSMUST00000160704 1116 ntAPPRIS P2 TSL 1 (best) BASIC19■□□□□ 0.63
Trbv4A0A075B5I2 Rab6b-202ENSMUST00000189134 716 ntTSL 3 BASIC19■□□□□ 0.63
Trbv4A0A075B5I2 Nol7-205ENSMUST00000222499 756 ntAPPRIS ALT2 TSL 1 (best) BASIC19■□□□□ 0.63
Trbv4A0A075B5I2 Ptrh1-201ENSMUST00000066352 952 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Trbv4A0A075B5I2 Rnaseh1-201ENSMUST00000020959 1455 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Trbv4A0A075B5I2 C230037L18Rik-201ENSMUST00000136218 1886 ntTSL 1 (best) BASIC19■□□□□ 0.63
Trbv4A0A075B5I2 D11Wsu47e-202ENSMUST00000106621 2062 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Trbv4A0A075B5I2 Mchr1-201ENSMUST00000166855 2188 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Trbv4A0A075B5I2 Smap1-201ENSMUST00000027339 2289 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Trbv4A0A075B5I2 Atf6b-201ENSMUST00000015605 2566 ntAPPRIS P2 TSL 1 (best) BASIC19■□□□□ 0.63
Trbv4A0A075B5I2 Slc25a10-201ENSMUST00000026899 2023 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Trbv4A0A075B5I2 Lgmn-202ENSMUST00000110020 1835 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Trbv4A0A075B5I2 Ica1-203ENSMUST00000115519 1706 ntAPPRIS ALT2 TSL 5 BASIC19■□□□□ 0.63
Trbv4A0A075B5I2 Cct4-201ENSMUST00000020562 1634 ntTSL 5 BASIC19■□□□□ 0.63
Trbv4A0A075B5I2 Ccdc85c-202ENSMUST00000222310 4298 ntAPPRIS P2 TSL 5 BASIC19■□□□□ 0.63
Trbv4A0A075B5I2 Ythdf1-201ENSMUST00000037299 3184 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
Trbv4A0A075B5I2 H19-202ENSMUST00000136359 2286 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
Trbv4A0A075B5I2 Pxk-202ENSMUST00000112689 2840 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
Trbv4A0A075B5I2 Zfp385b-204ENSMUST00000111831 2734 ntAPPRIS P3 TSL 1 (best) BASIC18.99■□□□□ 0.63
Trbv4A0A075B5I2 Pdp1-206ENSMUST00000108302 2525 ntTSL 3 BASIC18.99■□□□□ 0.63
Trbv4A0A075B5I2 Ndfip2-206ENSMUST00000181969 2532 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
Trbv4A0A075B5I2 Ost4-202ENSMUST00000132253 1144 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
Trbv4A0A075B5I2 Gm20532-201ENSMUST00000174066 780 ntAPPRIS P1 TSL 5 BASIC18.99■□□□□ 0.63
Trbv4A0A075B5I2 Gm38205-201ENSMUST00000192243 258 ntBASIC18.99■□□□□ 0.63
Trbv4A0A075B5I2 Nubp1-201ENSMUST00000023146 2121 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
Trbv4A0A075B5I2 Gm10153-201ENSMUST00000084415 522 ntTSL 5 BASIC18.99■□□□□ 0.63
Trbv4A0A075B5I2 Tmem102-201ENSMUST00000051025 1933 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
Trbv4A0A075B5I2 Dnaja4-202ENSMUST00000120452 1827 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
Trbv4A0A075B5I2 3830408C21Rik-206ENSMUST00000225489 1810 ntBASIC18.99■□□□□ 0.63
Trbv4A0A075B5I2 Cep57-209ENSMUST00000148086 2467 ntAPPRIS ALT2 TSL 1 (best) BASIC18.99■□□□□ 0.63
Trbv4A0A075B5I2 Spsb3-203ENSMUST00000117890 1641 ntAPPRIS ALT2 TSL 1 (best) BASIC18.99■□□□□ 0.63
Trbv4A0A075B5I2 Irak1bp1-202ENSMUST00000113245 2158 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
Trbv4A0A075B5I2 Pgf-204ENSMUST00000223220 2080 ntAPPRIS ALT2 TSL 1 (best) BASIC18.99■□□□□ 0.63
Trbv4A0A075B5I2 Sema6d-202ENSMUST00000076335 6276 ntAPPRIS ALT2 TSL 1 (best) BASIC18.99■□□□□ 0.63
Trbv4A0A075B5I2 Adamts18-201ENSMUST00000093113 5642 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
Trbv4A0A075B5I2 Phox2b-201ENSMUST00000012664 3013 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Trbv4A0A075B5I2 Trmt11-201ENSMUST00000019927 2359 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Trbv4A0A075B5I2 Rabgap1l-201ENSMUST00000028049 2748 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Trbv4A0A075B5I2 Nbn-201ENSMUST00000029879 2533 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Trbv4A0A075B5I2 Snx4-201ENSMUST00000023502 2442 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Trbv4A0A075B5I2 Cdk19os-202ENSMUST00000143103 1124 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
Trbv4A0A075B5I2 Lmo1-201ENSMUST00000036992 1282 ntAPPRIS P3 TSL 1 (best) BASIC18.98■□□□□ 0.63
Trbv4A0A075B5I2 Vamp5-201ENSMUST00000074231 553 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Trbv4A0A075B5I2 Sigmar1-202ENSMUST00000071561 1547 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
Trbv4A0A075B5I2 Nectin3-201ENSMUST00000023334 3062 ntAPPRIS P4 TSL 1 (best) BASIC18.98■□□□□ 0.63
Trbv4A0A075B5I2 Cd37-209ENSMUST00000211373 1428 ntAPPRIS ALT2 TSL 1 (best) BASIC18.98■□□□□ 0.63
Trbv4A0A075B5I2 Rpap3-201ENSMUST00000023104 2260 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Trbv4A0A075B5I2 Erlin1-202ENSMUST00000112028 3136 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Trbv4A0A075B5I2 Papola-212ENSMUST00000168186 2436 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
Trbv4A0A075B5I2 Tpra1-201ENSMUST00000055022 1820 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Trbv4A0A075B5I2 Nkiras2-203ENSMUST00000107376 1727 ntAPPRIS P1 TSL 5 BASIC18.97■□□□□ 0.63
Trbv4A0A075B5I2 Anks3-201ENSMUST00000023157 2483 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Trbv4A0A075B5I2 Psmd3-201ENSMUST00000017365 2148 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Trbv4A0A075B5I2 Mex3d-201ENSMUST00000105350 3266 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Trbv4A0A075B5I2 Slc35a2-203ENSMUST00000115663 1527 ntAPPRIS P4 TSL 2 BASIC18.97■□□□□ 0.63
Trbv4A0A075B5I2 Sumo3-209ENSMUST00000174113 512 ntAPPRIS P1 TSL 2 BASIC18.97■□□□□ 0.63
Trbv4A0A075B5I2 Gm27032-201ENSMUST00000183124 1116 ntBASIC18.97■□□□□ 0.63
Trbv4A0A075B5I2 H2-Ke6-201ENSMUST00000045467 965 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Trbv4A0A075B5I2 Fiz1-204ENSMUST00000207030 2178 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Trbv4A0A075B5I2 A930001C03Rik-204ENSMUST00000154407 1402 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
Trbv4A0A075B5I2 Lrrfip1-201ENSMUST00000068116 2050 ntAPPRIS ALT2 TSL 5 BASIC18.97■□□□□ 0.63
Trbv4A0A075B5I2 Slc25a16-201ENSMUST00000044977 3145 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Trbv4A0A075B5I2 Golga7b-202ENSMUST00000122375 2836 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Trbv4A0A075B5I2 Nipsnap2-205ENSMUST00000186265 1600 ntAPPRIS P1 TSL 2 BASIC18.96■□□□□ 0.63
Trbv4A0A075B5I2 Ntmt1-201ENSMUST00000041830 1387 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Trbv4A0A075B5I2 Jmjd7-201ENSMUST00000044675 1373 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Trbv4A0A075B5I2 Gm6627-201ENSMUST00000218299 2386 ntBASIC18.96■□□□□ 0.63
Trbv4A0A075B5I2 Lmtk3-204ENSMUST00000209617 5051 ntAPPRIS ALT2 TSL 1 (best) BASIC18.96■□□□□ 0.63
Trbv4A0A075B5I2 Maf-202ENSMUST00000109104 6360 ntAPPRIS P2 BASIC18.96■□□□□ 0.63
Trbv4A0A075B5I2 Fdx1-201ENSMUST00000034552 875 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Trbv4A0A075B5I2 Ferd3l-201ENSMUST00000061035 886 ntAPPRIS P1 BASIC18.96■□□□□ 0.63
Trbv4A0A075B5I2 Cox7c-202ENSMUST00000078764 433 ntTSL 2 BASIC18.96■□□□□ 0.63
Trbv4A0A075B5I2 Gm21992-201ENSMUST00000172000 1434 ntAPPRIS P1 TSL 2 BASIC18.96■□□□□ 0.63
Trbv4A0A075B5I2 Gm21992-206ENSMUST00000179909 1435 ntTSL 5 BASIC18.96■□□□□ 0.63
Trbv4A0A075B5I2 Anapc16-204ENSMUST00000182898 1852 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Trbv4A0A075B5I2 Nhlh1-201ENSMUST00000059794 2464 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Trbv4A0A075B5I2 Ube4b-202ENSMUST00000103212 5626 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Trbv4A0A075B5I2 Palm-202ENSMUST00000105379 2519 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
Trbv4A0A075B5I2 Kl-201ENSMUST00000078856 5118 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Trbv4A0A075B5I2 Nr1h3-204ENSMUST00000111356 1955 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Trbv4A0A075B5I2 Snx20-201ENSMUST00000034087 1699 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Trbv4A0A075B5I2 Iars2-203ENSMUST00000110975 2801 ntTSL 5 BASIC18.95■□□□□ 0.62
Trbv4A0A075B5I2 Gm26507-201ENSMUST00000181838 1410 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
Trbv4A0A075B5I2 Nexmif-201ENSMUST00000056502 5211 ntAPPRIS ALT2 TSL 1 (best) BASIC18.95■□□□□ 0.62
Trbv4A0A075B5I2 Rnf39-202ENSMUST00000173072 631 ntTSL 2 BASIC18.95■□□□□ 0.62
Trbv4A0A075B5I2 1700017B05Rik-204ENSMUST00000215298 1023 ntAPPRIS ALT2 TSL 1 (best) BASIC18.95■□□□□ 0.62
Trbv4A0A075B5I2 AC122828.1-201ENSMUST00000220785 489 ntTSL 3 BASIC18.95■□□□□ 0.62
Trbv4A0A075B5I2 Gm1673-201ENSMUST00000094869 477 ntAPPRIS P3 TSL 1 (best) BASIC18.95■□□□□ 0.62
Trbv4A0A075B5I2 Fzr1-205ENSMUST00000140901 3057 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Trbv4A0A075B5I2 Fam118a-201ENSMUST00000023069 2543 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Trbv4A0A075B5I2 Nectin1-201ENSMUST00000034510 5653 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Trbv4A0A075B5I2 Plekhm2-201ENSMUST00000030751 4154 ntAPPRIS ALT2 TSL 1 (best) BASIC18.94■□□□□ 0.62
Trbv4A0A075B5I2 N4bp1-201ENSMUST00000034074 6469 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Retrieved 100 of 76,532 protein–RNA pairs in 55.3 ms