Protein–RNA interactions for Protein: Q9Z0G9

Cldn3, Claudin-3, mousemouse

Predictions only

Length 219 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cldn3Q9Z0G9 Kirrel-201ENSMUST00000041732 2160 ntAPPRIS ALT2 TSL 1 (best) BASIC19.16■□□□□ 0.66
Cldn3Q9Z0G9 Slc11a1-211ENSMUST00000187516 1893 ntAPPRIS ALT2 TSL 5 BASIC19.16■□□□□ 0.66
Cldn3Q9Z0G9 Qpct-201ENSMUST00000040789 1924 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Cldn3Q9Z0G9 Cd83-201ENSMUST00000015540 2477 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Cldn3Q9Z0G9 Fam117b-201ENSMUST00000036540 5532 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Cldn3Q9Z0G9 Mark2-206ENSMUST00000164205 3104 ntAPPRIS ALT2 TSL 1 (best) BASIC19.15■□□□□ 0.66
Cldn3Q9Z0G9 Tmem164-201ENSMUST00000087333 5149 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Cldn3Q9Z0G9 Wnt10b-203ENSMUST00000226610 2217 ntAPPRIS P1 BASIC19.15■□□□□ 0.66
Cldn3Q9Z0G9 Cdh4-203ENSMUST00000108911 1208 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
Cldn3Q9Z0G9 Ppp4r1l-ps-204ENSMUST00000140992 367 ntTSL 3 BASIC19.15■□□□□ 0.66
Cldn3Q9Z0G9 Rab6b-202ENSMUST00000189134 716 ntTSL 3 BASIC19.15■□□□□ 0.66
Cldn3Q9Z0G9 Tmbim4-201ENSMUST00000020446 904 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Cldn3Q9Z0G9 Serbp1-216ENSMUST00000205106 1288 ntTSL 5 BASIC19.15■□□□□ 0.66
Cldn3Q9Z0G9 Hoxc12-201ENSMUST00000055562 1031 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Cldn3Q9Z0G9 Rpl13-201ENSMUST00000000756 780 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Cldn3Q9Z0G9 Dhps-201ENSMUST00000078665 1333 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Cldn3Q9Z0G9 1810055G02Rik-201ENSMUST00000039048 1882 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Cldn3Q9Z0G9 Mms22l-205ENSMUST00000138567 1350 ntTSL 2 BASIC19.15■□□□□ 0.66
Cldn3Q9Z0G9 A930001C03Rik-204ENSMUST00000154407 1402 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
Cldn3Q9Z0G9 Ogfod2-202ENSMUST00000119269 1474 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
Cldn3Q9Z0G9 Hnrnpl-211ENSMUST00000174548 2679 ntAPPRIS P1 TSL 5 BASIC19.15■□□□□ 0.66
Cldn3Q9Z0G9 Ildr2-204ENSMUST00000192732 2263 ntTSL 1 (best) BASIC19.14■□□□□ 0.66
Cldn3Q9Z0G9 Dnaja4-201ENSMUST00000070070 3003 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.66
Cldn3Q9Z0G9 Wnk2-202ENSMUST00000049265 6738 ntAPPRIS ALT2 TSL 5 BASIC19.14■□□□□ 0.66
Cldn3Q9Z0G9 Gm15751-201ENSMUST00000134552 1862 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
Cldn3Q9Z0G9 Baiap2l2-201ENSMUST00000165408 2100 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Cldn3Q9Z0G9 Apoe-205ENSMUST00000173739 1221 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Cldn3Q9Z0G9 Apoe-209ENSMUST00000174355 1104 ntAPPRIS P1 TSL 5 BASIC19.14■□□□□ 0.65
Cldn3Q9Z0G9 Crnde-206ENSMUST00000179421 773 ntTSL 3 BASIC19.14■□□□□ 0.65
Cldn3Q9Z0G9 Apoe-201ENSMUST00000003066 1128 ntAPPRIS P1 TSL 5 BASIC19.14■□□□□ 0.65
Cldn3Q9Z0G9 Il23a-201ENSMUST00000026449 1360 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Cldn3Q9Z0G9 Arid1b-201ENSMUST00000092723 7150 ntAPPRIS ALT2 TSL 5 BASIC19.14■□□□□ 0.65
Cldn3Q9Z0G9 Meis3-205ENSMUST00000176506 1839 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
Cldn3Q9Z0G9 AI115009-201ENSMUST00000181093 1853 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
Cldn3Q9Z0G9 E030030I06Rik-202ENSMUST00000179054 2081 ntAPPRIS P4 TSL 1 (best) BASIC19.13■□□□□ 0.65
Cldn3Q9Z0G9 Nkx2-1-202ENSMUST00000178477 2242 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Cldn3Q9Z0G9 Ankle2-201ENSMUST00000031474 5215 ntAPPRIS ALT2 TSL 1 (best) BASIC19.13■□□□□ 0.65
Cldn3Q9Z0G9 Traf3-203ENSMUST00000117269 6972 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
Cldn3Q9Z0G9 Zfyve9-202ENSMUST00000106657 6459 ntAPPRIS P2 TSL 5 BASIC19.13■□□□□ 0.65
Cldn3Q9Z0G9 Numbl-201ENSMUST00000079258 2760 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Cldn3Q9Z0G9 Chpt1-203ENSMUST00000117440 4863 ntAPPRIS ALT2 TSL 5 BASIC19.13■□□□□ 0.65
Cldn3Q9Z0G9 Abhd13-202ENSMUST00000139793 5191 ntAPPRIS P1 TSL 2 BASIC19.13■□□□□ 0.65
Cldn3Q9Z0G9 Carm1-202ENSMUST00000115394 3320 ntAPPRIS ALT2 TSL 5 BASIC19.13■□□□□ 0.65
Cldn3Q9Z0G9 Gnai2-203ENSMUST00000192837 421 ntTSL 5 BASIC19.13■□□□□ 0.65
Cldn3Q9Z0G9 Gm37564-201ENSMUST00000195000 330 ntTSL 5 BASIC19.13■□□□□ 0.65
Cldn3Q9Z0G9 Gm10306-201ENSMUST00000094969 533 ntAPPRIS P1 BASIC19.13■□□□□ 0.65
Cldn3Q9Z0G9 Rnf32-204ENSMUST00000160246 1565 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Cldn3Q9Z0G9 Capzb-204ENSMUST00000102508 1674 ntAPPRIS ALT1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Cldn3Q9Z0G9 Gm3667-201ENSMUST00000171906 2053 ntAPPRIS P1 TSL 5 BASIC19.13■□□□□ 0.65
Cldn3Q9Z0G9 Gm37352-201ENSMUST00000193908 2181 ntBASIC19.13■□□□□ 0.65
Cldn3Q9Z0G9 Slc35f4-202ENSMUST00000123534 2748 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
Cldn3Q9Z0G9 Cdk5r2-201ENSMUST00000160379 2799 ntAPPRIS P1 BASIC19.12■□□□□ 0.65
Cldn3Q9Z0G9 Csnk1a1-210ENSMUST00000170862 2259 ntAPPRIS ALT1 TSL 5 BASIC19.12■□□□□ 0.65
Cldn3Q9Z0G9 Slc9a6-201ENSMUST00000077741 4976 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Cldn3Q9Z0G9 Gmpr-201ENSMUST00000000260 1580 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Cldn3Q9Z0G9 Tmem121-201ENSMUST00000058491 1574 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Cldn3Q9Z0G9 Hsd17b2-201ENSMUST00000034304 1320 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Cldn3Q9Z0G9 P4hb-203ENSMUST00000168360 770 ntTSL 3 BASIC19.12■□□□□ 0.65
Cldn3Q9Z0G9 Lhx1-204ENSMUST00000184646 1201 ntTSL 5 BASIC19.12■□□□□ 0.65
Cldn3Q9Z0G9 AC124603.1-201ENSMUST00000223843 308 ntBASIC19.12■□□□□ 0.65
Cldn3Q9Z0G9 Rab1a-203ENSMUST00000109602 2626 ntTSL 5 BASIC19.12■□□□□ 0.65
Cldn3Q9Z0G9 Zdhhc14-201ENSMUST00000089185 3115 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Cldn3Q9Z0G9 Tbc1d25-204ENSMUST00000172020 2441 ntAPPRIS ALT2 TSL 1 (best) BASIC19.11■□□□□ 0.65
Cldn3Q9Z0G9 Zbtb11os1-201ENSMUST00000186480 1350 ntBASIC19.11■□□□□ 0.65
Cldn3Q9Z0G9 Jmjd7-201ENSMUST00000044675 1373 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Cldn3Q9Z0G9 Ccdc50-201ENSMUST00000039443 2192 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
Cldn3Q9Z0G9 Kctd17-206ENSMUST00000162517 901 ntAPPRIS P4 TSL 1 (best) BASIC19.11■□□□□ 0.65
Cldn3Q9Z0G9 Kctd17-209ENSMUST00000166142 826 ntAPPRIS ALT2 TSL 1 (best) BASIC19.11■□□□□ 0.65
Cldn3Q9Z0G9 AC099934.2-201ENSMUST00000196389 70 ntBASIC19.11■□□□□ 0.65
Cldn3Q9Z0G9 AC156953.1-201ENSMUST00000196953 70 ntBASIC19.11■□□□□ 0.65
Cldn3Q9Z0G9 AC157822.2-201ENSMUST00000200291 70 ntBASIC19.11■□□□□ 0.65
Cldn3Q9Z0G9 E130116L18Rik-201ENSMUST00000066954 306 ntAPPRIS P1 BASIC19.11■□□□□ 0.65
Cldn3Q9Z0G9 Tmem123-201ENSMUST00000052865 2907 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Cldn3Q9Z0G9 Polg2-201ENSMUST00000021060 1506 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
Cldn3Q9Z0G9 Matn4-203ENSMUST00000109358 2056 ntTSL 5 BASIC19.1■□□□□ 0.65
Cldn3Q9Z0G9 Anapc5-205ENSMUST00000197074 2413 ntAPPRIS ALT2 TSL 1 (best) BASIC19.1■□□□□ 0.65
Cldn3Q9Z0G9 Anapc5-212ENSMUST00000199406 2413 ntAPPRIS ALT2 TSL 1 (best) BASIC19.1■□□□□ 0.65
Cldn3Q9Z0G9 Gm29394-202ENSMUST00000176935 1326 ntAPPRIS P5 TSL 2 BASIC19.1■□□□□ 0.65
Cldn3Q9Z0G9 Dmwd-202ENSMUST00000108479 2388 ntAPPRIS ALT2 TSL 5 BASIC19.1■□□□□ 0.65
Cldn3Q9Z0G9 Rfc5-202ENSMUST00000111953 772 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
Cldn3Q9Z0G9 Gm27027-201ENSMUST00000183110 547 ntAPPRIS P1 TSL 3 BASIC19.1■□□□□ 0.65
Cldn3Q9Z0G9 Gm42778-201ENSMUST00000199644 553 ntBASIC19.1■□□□□ 0.65
Cldn3Q9Z0G9 E4f1-205ENSMUST00000226941 2642 ntAPPRIS ALT2 BASIC19.1■□□□□ 0.65
Cldn3Q9Z0G9 Spsb3-203ENSMUST00000117890 1641 ntAPPRIS ALT2 TSL 1 (best) BASIC19.1■□□□□ 0.65
Cldn3Q9Z0G9 Runx2-210ENSMUST00000162373 1565 ntAPPRIS ALT2 TSL 5 BASIC19.1■□□□□ 0.65
Cldn3Q9Z0G9 Six3os1-206ENSMUST00000175921 2737 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
Cldn3Q9Z0G9 Vav2-201ENSMUST00000056176 5221 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
Cldn3Q9Z0G9 Reep4-203ENSMUST00000226563 1444 ntBASIC19.09■□□□□ 0.65
Cldn3Q9Z0G9 Ralgps2-205ENSMUST00000185198 2229 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
Cldn3Q9Z0G9 Map3k9-201ENSMUST00000035987 4564 ntAPPRIS P2 TSL 1 (best) BASIC19.09■□□□□ 0.65
Cldn3Q9Z0G9 6030419C18Rik-201ENSMUST00000085658 2139 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
Cldn3Q9Z0G9 C230096K16Rik-201ENSMUST00000198074 1722 ntBASIC19.09■□□□□ 0.65
Cldn3Q9Z0G9 Gal3st3-201ENSMUST00000061169 2421 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
Cldn3Q9Z0G9 E130218I03Rik-201ENSMUST00000122952 943 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
Cldn3Q9Z0G9 Gm38205-201ENSMUST00000192243 258 ntBASIC19.09■□□□□ 0.65
Cldn3Q9Z0G9 Gramd1a-201ENSMUST00000001280 2713 ntAPPRIS P2 TSL 1 (best) BASIC19.09■□□□□ 0.65
Cldn3Q9Z0G9 Nfix-201ENSMUST00000076715 1403 ntTSL 1 (best) BASIC19.08■□□□□ 0.65
Cldn3Q9Z0G9 Pdzd3-201ENSMUST00000034618 2193 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.65
Cldn3Q9Z0G9 Fzd8-201ENSMUST00000041080 3346 ntAPPRIS P1 BASIC19.08■□□□□ 0.65
Cldn3Q9Z0G9 B930094E09Rik-201ENSMUST00000164667 1240 ntAPPRIS P1 BASIC19.08■□□□□ 0.64
Retrieved 100 of 76,532 protein–RNA pairs in 64.2 ms