Protein–RNA interactions for Protein: Q9Z0D9

Cx3cr1, CX3C chemokine receptor 1, mousemouse

Predictions only

Length 354 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cx3cr1Q9Z0D9 Ero1l-201ENSMUST00000022378 4418 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
Cx3cr1Q9Z0D9 Pno1-201ENSMUST00000020317 1544 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
Cx3cr1Q9Z0D9 Ciz1-205ENSMUST00000113338 2666 ntAPPRIS P3 TSL 5 BASIC16.08■□□□□ 0.16
Cx3cr1Q9Z0D9 Nsmf-205ENSMUST00000114386 2685 ntTSL 5 BASIC16.08■□□□□ 0.16
Cx3cr1Q9Z0D9 Dach1-202ENSMUST00000071533 5219 ntAPPRIS P4 TSL 1 (best) BASIC16.08■□□□□ 0.16
Cx3cr1Q9Z0D9 A930002H24Rik-201ENSMUST00000050753 492 ntAPPRIS P1 BASIC16.07■□□□□ 0.16
Cx3cr1Q9Z0D9 Mapre3-202ENSMUST00000200692 1816 ntTSL 5 BASIC16.07■□□□□ 0.16
Cx3cr1Q9Z0D9 Arhgap35-201ENSMUST00000075845 9147 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Cx3cr1Q9Z0D9 Slc39a5-201ENSMUST00000042666 1947 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Cx3cr1Q9Z0D9 Tfeb-203ENSMUST00000113284 1974 ntTSL 5 BASIC16.07■□□□□ 0.16
Cx3cr1Q9Z0D9 Ndfip2-206ENSMUST00000181969 2532 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Cx3cr1Q9Z0D9 Ccdc3-201ENSMUST00000027988 2670 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Cx3cr1Q9Z0D9 Kcns1-201ENSMUST00000045196 2712 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Cx3cr1Q9Z0D9 Fzr1-205ENSMUST00000140901 3057 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Cx3cr1Q9Z0D9 Nck2-201ENSMUST00000086421 2772 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Cx3cr1Q9Z0D9 Wdr37-203ENSMUST00000164183 1780 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
Cx3cr1Q9Z0D9 Rp2-203ENSMUST00000115391 1398 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Cx3cr1Q9Z0D9 Tesk1-201ENSMUST00000060864 3947 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Cx3cr1Q9Z0D9 1700016H13Rik-203ENSMUST00000120108 797 ntAPPRIS P1 TSL 2 BASIC16.06■□□□□ 0.16
Cx3cr1Q9Z0D9 Tmem62-201ENSMUST00000067582 2921 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Cx3cr1Q9Z0D9 Golga7b-202ENSMUST00000122375 2836 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Cx3cr1Q9Z0D9 Runx1t1-201ENSMUST00000006761 5783 ntAPPRIS ALT2 TSL 1 (best) BASIC16.06■□□□□ 0.16
Cx3cr1Q9Z0D9 Olig2-201ENSMUST00000035608 2437 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Cx3cr1Q9Z0D9 Tmbim1-201ENSMUST00000016309 2378 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Cx3cr1Q9Z0D9 Ccdc102a-201ENSMUST00000077955 2304 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Cx3cr1Q9Z0D9 Gm32699-201ENSMUST00000221728 1988 ntBASIC16.06■□□□□ 0.16
Cx3cr1Q9Z0D9 Btnl9-201ENSMUST00000046522 5273 ntAPPRIS P2 TSL 1 (best) BASIC16.05■□□□□ 0.16
Cx3cr1Q9Z0D9 Dbnl-201ENSMUST00000020769 1638 ntAPPRIS ALT2 TSL 1 (best) BASIC16.05■□□□□ 0.16
Cx3cr1Q9Z0D9 Hmg20b-202ENSMUST00000105323 1463 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Cx3cr1Q9Z0D9 Rhbdd3-202ENSMUST00000101610 2333 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Cx3cr1Q9Z0D9 Abhd13-201ENSMUST00000048216 5074 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Cx3cr1Q9Z0D9 Dusp28-201ENSMUST00000060913 1314 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Cx3cr1Q9Z0D9 Scamp3-202ENSMUST00000098941 1338 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
Cx3cr1Q9Z0D9 Pigx-211ENSMUST00000189013 982 ntAPPRIS ALT2 TSL 2 BASIC16.05■□□□□ 0.16
Cx3cr1Q9Z0D9 Sin3b-203ENSMUST00000212095 1257 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
Cx3cr1Q9Z0D9 Grk6-206ENSMUST00000224995 2971 ntBASIC16.05■□□□□ 0.16
Cx3cr1Q9Z0D9 Igfbp7-201ENSMUST00000046746 1116 ntAPPRIS ALT2 TSL 1 (best) BASIC16.05■□□□□ 0.16
Cx3cr1Q9Z0D9 Mtcl1-201ENSMUST00000086693 7221 ntAPPRIS P3 TSL 1 (best) BASIC16.05■□□□□ 0.16
Cx3cr1Q9Z0D9 Pigx-201ENSMUST00000096109 993 ntAPPRIS ALT2 TSL 1 (best) BASIC16.05■□□□□ 0.16
Cx3cr1Q9Z0D9 Txnrd2-203ENSMUST00000115606 1905 ntAPPRIS P2 TSL 1 (best) BASIC16.05■□□□□ 0.16
Cx3cr1Q9Z0D9 Plin1-201ENSMUST00000032762 1916 ntAPPRIS P1 TSL 5 BASIC16.05■□□□□ 0.16
Cx3cr1Q9Z0D9 Mink1-201ENSMUST00000072237 4994 ntAPPRIS ALT2 TSL 5 BASIC16.05■□□□□ 0.16
Cx3cr1Q9Z0D9 Ripk2-201ENSMUST00000037035 2692 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Cx3cr1Q9Z0D9 Coq9-201ENSMUST00000034234 1789 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Cx3cr1Q9Z0D9 Zhx1-202ENSMUST00000110168 5212 ntAPPRIS P1 TSL 5 BASIC16.05■□□□□ 0.16
Cx3cr1Q9Z0D9 Fam43b-201ENSMUST00000105032 2437 ntAPPRIS P1 BASIC16.05■□□□□ 0.16
Cx3cr1Q9Z0D9 Enah-205ENSMUST00000177811 4231 ntAPPRIS ALT2 TSL 5 BASIC16.05■□□□□ 0.16
Cx3cr1Q9Z0D9 Nat14-201ENSMUST00000047309 1612 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Cx3cr1Q9Z0D9 Pgs1-203ENSMUST00000132676 2863 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Cx3cr1Q9Z0D9 Gm43182-201ENSMUST00000199476 2528 ntBASIC16.04■□□□□ 0.16
Cx3cr1Q9Z0D9 Smarca4-202ENSMUST00000098948 6376 ntAPPRIS ALT2 TSL 1 (best) BASIC16.04■□□□□ 0.16
Cx3cr1Q9Z0D9 Zdhhc13-201ENSMUST00000118927 2410 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Cx3cr1Q9Z0D9 Gm5540-201ENSMUST00000131852 1848 ntBASIC16.04■□□□□ 0.16
Cx3cr1Q9Z0D9 Cetn4-203ENSMUST00000102955 1064 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Cx3cr1Q9Z0D9 Srsf6-202ENSMUST00000126163 515 ntTSL 5 BASIC16.04■□□□□ 0.16
Cx3cr1Q9Z0D9 Krt8-ps-201ENSMUST00000208495 945 ntBASIC16.04■□□□□ 0.16
Cx3cr1Q9Z0D9 Zmynd10-201ENSMUST00000010188 1765 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Cx3cr1Q9Z0D9 Neurl1b-201ENSMUST00000053020 6195 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Cx3cr1Q9Z0D9 Bmpr1b-203ENSMUST00000106230 2147 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Cx3cr1Q9Z0D9 Zc3h14-202ENSMUST00000057000 3046 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
Cx3cr1Q9Z0D9 1700003E16Rik-202ENSMUST00000203203 2070 ntTSL 2 BASIC16.04■□□□□ 0.16
Cx3cr1Q9Z0D9 Krt82-201ENSMUST00000023713 2087 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Cx3cr1Q9Z0D9 Naif1-201ENSMUST00000048431 4650 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Cx3cr1Q9Z0D9 Nfatc2-201ENSMUST00000029057 2310 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
Cx3cr1Q9Z0D9 Tmem127-201ENSMUST00000035871 4811 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Cx3cr1Q9Z0D9 5330438D12Rik-201ENSMUST00000064101 2229 ntBASIC16.03■□□□□ 0.16
Cx3cr1Q9Z0D9 Gng12-202ENSMUST00000114222 1354 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Cx3cr1Q9Z0D9 Efnb2-201ENSMUST00000001319 4793 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Cx3cr1Q9Z0D9 Mtm1-204ENSMUST00000101501 770 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
Cx3cr1Q9Z0D9 Fbxw2-206ENSMUST00000113080 1923 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Cx3cr1Q9Z0D9 Gm10300-201ENSMUST00000094662 2296 ntAPPRIS P1 BASIC16.03■□□□□ 0.16
Cx3cr1Q9Z0D9 Mzt1-201ENSMUST00000042662 2240 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Cx3cr1Q9Z0D9 Pitpnm2-210ENSMUST00000162812 6952 ntAPPRIS P3 TSL 1 (best) BASIC16.03■□□□□ 0.16
Cx3cr1Q9Z0D9 Igsf8-202ENSMUST00000085912 2182 ntAPPRIS P1 TSL 5 BASIC16.03■□□□□ 0.16
Cx3cr1Q9Z0D9 Dlgap2-203ENSMUST00000133298 4503 ntAPPRIS ALT2 TSL 1 (best) BASIC16.02■□□□□ 0.16
Cx3cr1Q9Z0D9 Hbs1l-202ENSMUST00000061324 1998 ntTSL 3 BASIC16.02■□□□□ 0.16
Cx3cr1Q9Z0D9 Osbpl1a-203ENSMUST00000118313 2893 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
Cx3cr1Q9Z0D9 Cds2-202ENSMUST00000103181 8396 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
Cx3cr1Q9Z0D9 Snap91-201ENSMUST00000036347 4237 ntAPPRIS ALT2 TSL 5 BASIC16.02■□□□□ 0.16
Cx3cr1Q9Z0D9 Trim47-202ENSMUST00000106441 2192 ntAPPRIS ALT2 TSL 1 (best) BASIC16.02■□□□□ 0.16
Cx3cr1Q9Z0D9 Spata2l-202ENSMUST00000166768 2707 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
Cx3cr1Q9Z0D9 Clta-204ENSMUST00000107849 1099 ntAPPRIS ALT2 TSL 1 (best) BASIC16.02■□□□□ 0.16
Cx3cr1Q9Z0D9 Clta-205ENSMUST00000107851 1135 ntAPPRIS P4 TSL 2 BASIC16.02■□□□□ 0.16
Cx3cr1Q9Z0D9 Pdgfa-204ENSMUST00000110897 1287 ntAPPRIS P1 TSL 5 BASIC16.02■□□□□ 0.16
Cx3cr1Q9Z0D9 Vps9d1-203ENSMUST00000122363 2952 ntAPPRIS P3 TSL 1 (best) BASIC16.02■□□□□ 0.16
Cx3cr1Q9Z0D9 Bloc1s4-201ENSMUST00000071949 1273 ntAPPRIS P1 BASIC16.02■□□□□ 0.16
Cx3cr1Q9Z0D9 4930527J03Rik-201ENSMUST00000094270 543 ntBASIC16.02■□□□□ 0.16
Cx3cr1Q9Z0D9 Pcnx-204ENSMUST00000221721 8318 ntAPPRIS ALT2 TSL 5 BASIC16.02■□□□□ 0.16
Cx3cr1Q9Z0D9 Sphk1-203ENSMUST00000100201 1800 ntAPPRIS ALT2 TSL 1 (best) BASIC16.02■□□□□ 0.16
Cx3cr1Q9Z0D9 Pgk1-201ENSMUST00000081593 1825 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
Cx3cr1Q9Z0D9 Gmds-201ENSMUST00000041859 1713 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
Cx3cr1Q9Z0D9 Snrnp70-201ENSMUST00000074575 1735 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
Cx3cr1Q9Z0D9 Nkd1-201ENSMUST00000034086 3035 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
Cx3cr1Q9Z0D9 Rap1b-201ENSMUST00000064667 2724 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
Cx3cr1Q9Z0D9 Gpc6-204ENSMUST00000125435 2423 ntAPPRIS ALT2 TSL 1 (best) BASIC16.02■□□□□ 0.15
Cx3cr1Q9Z0D9 Nmnat3-202ENSMUST00000112937 1898 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
Cx3cr1Q9Z0D9 Dnajb11-205ENSMUST00000178320 1628 ntAPPRIS P1 TSL 5 BASIC16.01■□□□□ 0.15
Cx3cr1Q9Z0D9 Mark2-203ENSMUST00000051711 2867 ntAPPRIS P4 TSL 1 (best) BASIC16.01■□□□□ 0.15
Cx3cr1Q9Z0D9 Gm26798-201ENSMUST00000181384 2837 ntTSL 5 BASIC16.01■□□□□ 0.15
Cx3cr1Q9Z0D9 Lca5l-201ENSMUST00000054855 2508 ntAPPRIS P2 TSL 1 (best) BASIC16.01■□□□□ 0.15
Retrieved 100 of 76,532 protein–RNA pairs in 25.9 ms