Protein–RNA interactions for Protein: Q9WUB7

Clcnka, Chloride channel protein ClC-Ka, mousemouse

Predictions only

Length 687 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ClcnkaQ9WUB7 6430500D05Rik-201ENSMUST00000198286 1176 ntBASIC17.4■□□□□ 0.38
ClcnkaQ9WUB7 Fdx1-201ENSMUST00000034552 875 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
ClcnkaQ9WUB7 Dtd2-202ENSMUST00000085404 1012 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
ClcnkaQ9WUB7 Syt7-203ENSMUST00000169121 6834 ntTSL 5 BASIC17.4■□□□□ 0.38
ClcnkaQ9WUB7 Mafg-201ENSMUST00000058162 4923 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
ClcnkaQ9WUB7 Atf6b-201ENSMUST00000015605 2566 ntAPPRIS P2 TSL 1 (best) BASIC17.4■□□□□ 0.38
ClcnkaQ9WUB7 Tmem11-203ENSMUST00000168218 1511 ntTSL 2 BASIC17.4■□□□□ 0.38
ClcnkaQ9WUB7 Klhdc3-202ENSMUST00000165007 1973 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
ClcnkaQ9WUB7 Ascl4-202ENSMUST00000170396 2016 ntAPPRIS P1 BASIC17.4■□□□□ 0.38
ClcnkaQ9WUB7 Wnk2-210ENSMUST00000162403 6147 ntAPPRIS ALT2 TSL 5 BASIC17.4■□□□□ 0.38
ClcnkaQ9WUB7 Ankle2-201ENSMUST00000031474 5215 ntAPPRIS ALT2 TSL 1 (best) BASIC17.4■□□□□ 0.38
ClcnkaQ9WUB7 Sept7-201ENSMUST00000115272 2533 ntAPPRIS ALT1 TSL 5 BASIC17.4■□□□□ 0.38
ClcnkaQ9WUB7 Vapa-201ENSMUST00000024897 1640 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.38
ClcnkaQ9WUB7 Ildr2-204ENSMUST00000192732 2263 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
ClcnkaQ9WUB7 Paip2-205ENSMUST00000115737 713 ntAPPRIS P1 TSL 3 BASIC17.39■□□□□ 0.37
ClcnkaQ9WUB7 Gm15270-201ENSMUST00000125158 870 ntTSL 3 BASIC17.39■□□□□ 0.37
ClcnkaQ9WUB7 4930535I16Rik-201ENSMUST00000181410 519 ntAPPRIS P1 BASIC17.39■□□□□ 0.37
ClcnkaQ9WUB7 Morf4l1-211ENSMUST00000191189 1223 ntTSL 5 BASIC17.39■□□□□ 0.37
ClcnkaQ9WUB7 Sdf2l1-201ENSMUST00000023453 1108 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
ClcnkaQ9WUB7 Clint1-202ENSMUST00000109261 3365 ntAPPRIS ALT2 TSL 5 BASIC17.39■□□□□ 0.37
ClcnkaQ9WUB7 Mpp6-201ENSMUST00000036225 1896 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
ClcnkaQ9WUB7 Dynll2-204ENSMUST00000178105 2187 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
ClcnkaQ9WUB7 Fbxl5-204ENSMUST00000119523 2801 ntTSL 5 BASIC17.39■□□□□ 0.37
ClcnkaQ9WUB7 Zfp385b-204ENSMUST00000111831 2734 ntAPPRIS P3 TSL 1 (best) BASIC17.38■□□□□ 0.37
ClcnkaQ9WUB7 Gm45640-201ENSMUST00000210665 1896 ntBASIC17.38■□□□□ 0.37
ClcnkaQ9WUB7 Selenos-205ENSMUST00000206575 1157 ntAPPRIS ALT1 TSL 2 BASIC17.38■□□□□ 0.37
ClcnkaQ9WUB7 Hes3-202ENSMUST00000218045 962 ntAPPRIS ALT2 TSL 5 BASIC17.38■□□□□ 0.37
ClcnkaQ9WUB7 Nabp2-201ENSMUST00000026439 1130 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
ClcnkaQ9WUB7 Gm45015-201ENSMUST00000207943 1364 ntAPPRIS P1 TSL 5 BASIC17.38■□□□□ 0.37
ClcnkaQ9WUB7 Pigt-202ENSMUST00000117066 1712 ntAPPRIS ALT2 TSL 1 (best) BASIC17.38■□□□□ 0.37
ClcnkaQ9WUB7 Gm11762-201ENSMUST00000135630 1705 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
ClcnkaQ9WUB7 Fam149b-204ENSMUST00000090503 2053 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
ClcnkaQ9WUB7 Etnk1-203ENSMUST00000204947 1791 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
ClcnkaQ9WUB7 1700123O20Rik-201ENSMUST00000038539 1843 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
ClcnkaQ9WUB7 Cd24a-201ENSMUST00000058714 1816 ntAPPRIS P2 TSL 1 (best) BASIC17.37■□□□□ 0.37
ClcnkaQ9WUB7 Csnk1a1-210ENSMUST00000170862 2259 ntAPPRIS ALT1 TSL 5 BASIC17.37■□□□□ 0.37
ClcnkaQ9WUB7 Pqlc3-201ENSMUST00000054536 1928 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
ClcnkaQ9WUB7 B3gnt9-201ENSMUST00000093217 2325 ntAPPRIS P1 TSL 2 BASIC17.37■□□□□ 0.37
ClcnkaQ9WUB7 Hr-203ENSMUST00000161069 5607 ntAPPRIS P2 TSL 1 (best) BASIC17.37■□□□□ 0.37
ClcnkaQ9WUB7 Nfkbid-203ENSMUST00000108176 2014 ntAPPRIS ALT2 TSL 1 (best) BASIC17.37■□□□□ 0.37
ClcnkaQ9WUB7 Chd3os-201ENSMUST00000129321 2081 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
ClcnkaQ9WUB7 Stum-202ENSMUST00000179826 601 ntAPPRIS ALT1 TSL 5 BASIC17.37■□□□□ 0.37
ClcnkaQ9WUB7 Zfp580-202ENSMUST00000208570 693 ntAPPRIS ALT2 TSL 1 (best) BASIC17.37■□□□□ 0.37
ClcnkaQ9WUB7 Cox6a1-201ENSMUST00000040154 571 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
ClcnkaQ9WUB7 Pllp-201ENSMUST00000034227 1926 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
ClcnkaQ9WUB7 Hs3st5-202ENSMUST00000167191 2408 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
ClcnkaQ9WUB7 Gm32699-201ENSMUST00000221728 1988 ntBASIC17.37■□□□□ 0.37
ClcnkaQ9WUB7 Fam118a-201ENSMUST00000023069 2543 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
ClcnkaQ9WUB7 Khk-204ENSMUST00000201621 1583 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
ClcnkaQ9WUB7 Ubp1-201ENSMUST00000009885 3742 ntAPPRIS ALT1 TSL 5 BASIC17.36■□□□□ 0.37
ClcnkaQ9WUB7 Fiz1-204ENSMUST00000207030 2178 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
ClcnkaQ9WUB7 Gnpda1-201ENSMUST00000063814 2289 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
ClcnkaQ9WUB7 Wnt8a-201ENSMUST00000012426 1746 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
ClcnkaQ9WUB7 A530010L16Rik-201ENSMUST00000212007 2336 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
ClcnkaQ9WUB7 Trmt11-201ENSMUST00000019927 2359 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
ClcnkaQ9WUB7 Slc25a16-201ENSMUST00000044977 3145 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
ClcnkaQ9WUB7 Rab40c-207ENSMUST00000167626 2506 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
ClcnkaQ9WUB7 Wdr4-203ENSMUST00000167419 813 ntTSL 3 BASIC17.36■□□□□ 0.37
ClcnkaQ9WUB7 AV026068-208ENSMUST00000189098 286 ntTSL 5 BASIC17.36■□□□□ 0.37
ClcnkaQ9WUB7 Brpf3-201ENSMUST00000004985 5766 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
ClcnkaQ9WUB7 Minpp1-201ENSMUST00000025827 2619 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
ClcnkaQ9WUB7 Cox18-202ENSMUST00000118816 1307 ntAPPRIS ALT2 TSL 1 (best) BASIC17.36■□□□□ 0.37
ClcnkaQ9WUB7 AB124611-202ENSMUST00000086361 1310 ntAPPRIS ALT2 TSL 1 (best) BASIC17.36■□□□□ 0.37
ClcnkaQ9WUB7 Lrrc43-203ENSMUST00000196809 2031 ntAPPRIS ALT2 TSL 1 (best) BASIC17.36■□□□□ 0.37
ClcnkaQ9WUB7 Rnaseh1-201ENSMUST00000020959 1455 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
ClcnkaQ9WUB7 Dhx15-201ENSMUST00000031061 3010 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
ClcnkaQ9WUB7 Dxo-201ENSMUST00000046244 1519 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
ClcnkaQ9WUB7 Lypd3-201ENSMUST00000080718 1649 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
ClcnkaQ9WUB7 Rbm15b-201ENSMUST00000055843 6511 ntAPPRIS P1 BASIC17.36■□□□□ 0.37
ClcnkaQ9WUB7 Slc17a7-202ENSMUST00000209634 1860 ntTSL 5 BASIC17.35■□□□□ 0.37
ClcnkaQ9WUB7 Gm3667-201ENSMUST00000171906 2053 ntAPPRIS P1 TSL 5 BASIC17.35■□□□□ 0.37
ClcnkaQ9WUB7 Trim72-202ENSMUST00000106248 2134 ntAPPRIS P1 TSL 5 BASIC17.35■□□□□ 0.37
ClcnkaQ9WUB7 Surf4-201ENSMUST00000015011 3281 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
ClcnkaQ9WUB7 Akr7a5-201ENSMUST00000073787 1288 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
ClcnkaQ9WUB7 Cachd1-201ENSMUST00000030257 5765 ntAPPRIS P2 TSL 1 (best) BASIC17.35■□□□□ 0.37
ClcnkaQ9WUB7 0610038B21Rik-202ENSMUST00000184762 1524 ntBASIC17.35■□□□□ 0.37
ClcnkaQ9WUB7 March11-202ENSMUST00000140840 1558 ntAPPRIS P3 TSL 2 BASIC17.35■□□□□ 0.37
ClcnkaQ9WUB7 Krt24-201ENSMUST00000017255 1847 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
ClcnkaQ9WUB7 C230037L18Rik-201ENSMUST00000136218 1886 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
ClcnkaQ9WUB7 Hyal2-207ENSMUST00000195752 2062 ntAPPRIS P2 TSL 5 BASIC17.35■□□□□ 0.37
ClcnkaQ9WUB7 Lingo1-203ENSMUST00000114256 2782 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
ClcnkaQ9WUB7 Fblim1-202ENSMUST00000105784 3036 ntAPPRIS P1 TSL 5 BASIC17.34■□□□□ 0.37
ClcnkaQ9WUB7 Enah-203ENSMUST00000111025 3385 ntAPPRIS ALT2 TSL 5 BASIC17.34■□□□□ 0.37
ClcnkaQ9WUB7 Pex11b-202ENSMUST00000118557 2424 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
ClcnkaQ9WUB7 Sept4-206ENSMUST00000122067 1303 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
ClcnkaQ9WUB7 Kis2-201ENSMUST00000133214 1717 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
ClcnkaQ9WUB7 Gm16192-201ENSMUST00000148357 937 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
ClcnkaQ9WUB7 Mpg-201ENSMUST00000020528 1737 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
ClcnkaQ9WUB7 Ferd3l-201ENSMUST00000061035 886 ntAPPRIS P1 BASIC17.34■□□□□ 0.37
ClcnkaQ9WUB7 Vamp5-201ENSMUST00000074231 553 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
ClcnkaQ9WUB7 Tspan17-202ENSMUST00000099503 822 ntAPPRIS ALT1 TSL 5 BASIC17.34■□□□□ 0.37
ClcnkaQ9WUB7 Atrn-201ENSMUST00000028781 8745 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
ClcnkaQ9WUB7 Pafah1b1-201ENSMUST00000021091 5803 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
ClcnkaQ9WUB7 Gatad2a-202ENSMUST00000116463 3363 ntAPPRIS ALT2 TSL 1 (best) BASIC17.34■□□□□ 0.37
ClcnkaQ9WUB7 Sbspon-201ENSMUST00000040695 2748 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
ClcnkaQ9WUB7 Nhlh1-201ENSMUST00000059794 2464 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
ClcnkaQ9WUB7 Trim72-201ENSMUST00000081042 1755 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
ClcnkaQ9WUB7 Crlf2-203ENSMUST00000200284 1405 ntAPPRIS ALT2 TSL 1 (best) BASIC17.33■□□□□ 0.36
ClcnkaQ9WUB7 Grtp1-207ENSMUST00000211128 1416 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
ClcnkaQ9WUB7 2310034G01Rik-201ENSMUST00000189008 1373 ntAPPRIS P1 TSL 5 BASIC17.33■□□□□ 0.36
Retrieved 100 of 76,532 protein–RNA pairs in 97.9 ms